HitPredict

Interactor 1: HNRPU (Q00839)
Heterogeneous nuclear ribonucleoprotein U (hnRNP U) (GRIP120) (Nuclear p120 ribonucleoprotein) (Scaffold-attachment factor A) (SAF-A) (p120) (pp120)
Gene: HNRNPU

Interactor 2: SNW1 (Q13573)
SNW domain-containing protein 1 (Nuclear protein SkiP) (Nuclear receptor coactivator NCoA-62) (Ski-interacting protein)
Gene: SNW1

Species: Homo sapiens

Source: mint

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.65	0.60	0.628

The method score is based on:

Property	Details
Experiments	20467437, 12840015
Identification Methods	affinity chromatography technology, pull down, anti bait coimmunoprecipitation
Interaction Type	physical association, association

The annotation score is based on:

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0000122 - negative regulation of transcription by RNA polymerase II GO:0000398 - mRNA splicing, via spliceosome GO:0003714 - transcription corepressor activity GO:0003723 - RNA binding GO:0005634 - nucleus and 5 others more... GO:0005654 - nucleoplasm GO:0016363 - nuclear matrix GO:0016607 - nuclear speck GO:0045944 - positive regulation of transcription by RNA polymerase II GO:0071013 - catalytic step 2 spliceosome
Homologous interactions	3

Homologous interactions

Color coding for hit scores

	1	825
Hs

1	536

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024