Protein: RPB11
DNA-directed RNA polymerase II subunit RPB11-a (RNA polymerase II subunit B11-a) (RPB11a) (DNA-directed RNA polymerase II subunit J-1) (RNA polymerase II 13.3 kDa subunit)

Gene: RPB11, POLR2J
Organism: Homo sapiens
Interactions: 146
UniProt ID: P52435

Gene Ontology (top 5):
GO:0001055 - RNA polymerase II activity
GO:0003677 - DNA binding
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity
GO:0005634 - nucleus
GO:0005654 - nucleoplasm

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

169818

RPAC1
DNA-directed RNA polymerases I and III subunit RPAC1

7

17

High-throughput

0.969

High

583438

RPB3
DNA-directed RNA polymerase II subunit RPB3

6

17

Small-scale

0.949

High

624823

RPB1
DNA-directed RNA polymerase II subunit RPB1

6

11

Small-scale

0.944

High

676842

RPB2
DNA-directed RNA polymerase II subunit RPB2

5

9

Small-scale

0.922

High

854280

RPAB3
DNA-directed RNA polymerases I, II, and III subunit RPABC3

4

3

High-throughput

0.895

High

854409

RPB7
DNA-directed RNA polymerase II subunit RPB7

8

5

Small-scale

0.751

High

181400

RPB4
DNA-directed RNA polymerase II subunit RPB4

6

2

Small-scale

0.736

High

854485

PIHD1
PIH1 domain-containing protein 1

6

1

High-throughput

0.733

High

583675

RPAB1
DNA-directed RNA polymerases I, II, and III subunit RPABC1

5

3

Small-scale

0.718

High

854407

RPAB2
DNA-directed RNA polymerases I, II, and III subunit RPABC2

4

4

High-throughput

0.699

High

854439

RPAP2
Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2

4

2

High-throughput

0.699

High

854478

RPR1B
Regulation of nuclear pre-mRNA domain-containing protein 1B

4

3

High-throughput

0.699

High

854405

RPAB4
DNA-directed RNA polymerases I, II, and III subunit RPABC4

4

3

Small-scale

0.696

High

854462

RPAP1
RNA polymerase II-associated protein 1

4

3

Small-scale

0.694

High

854476

GPN1
GPN-loop GTPase 1

4

7

High-throughput

0.694

High

854464

RPB1B
DNA-directed RNA polymerase II subunit RPB11-b1

1

3

High-throughput

0.691

High

313409

MED26
Mediator of RNA polymerase II transcription subunit 26

4

0

High-throughput

0.670

High

295608

RMP
Unconventional prefoldin RPB5 interactor 1

3

1

High-throughput

0.667

High

738831

RPB9
DNA-directed RNA polymerase II subunit RPB9

3

8

High-throughput

0.667

High

854410

RPAB5
DNA-directed RNA polymerases I, II, and III subunit RPABC5

3

4

High-throughput

0.667

High

854411

TF2B
Transcription initiation factor IIB

3

5

Small-scale

0.656

High

854500

CTDP1
RNA polymerase II subunit A C-terminal domain phosphatase

3

1

Small-scale

0.656

High

854473

GPN2
GPN-loop GTPase 2

4

7

High-throughput

0.638

High

48641

MED19
Mediator of RNA polymerase II transcription subunit 19

3

0

High-throughput

0.638

High

854417

MED21
Mediator of RNA polymerase II transcription subunit 21

3

0

High-throughput

0.638

High

854487

MED29
Mediator of RNA polymerase II transcription subunit 29

3

0

High-throughput

0.638

High

854470

RPAP3
RNA polymerase II-associated protein 3

4

3

High-throughput

0.633

High

123884

SPT5H
Transcription elongation factor SPT5

2

1

High-throughput

0.628

High

638245

RBTN2
Rhombotin-2

2

1

High-throughput

0.628

High

854457

RPR1A
Regulation of nuclear pre-mRNA domain-containing protein 1A

2

3

High-throughput

0.628

High

854430

INT3
Integrator complex subunit 3

3

0

High-throughput

0.628

High

854467

MED28
Mediator of RNA polymerase II transcription subunit 28

3

0

High-throughput

0.628

High

156006

RPC1
DNA-directed RNA polymerase III subunit RPC1

1

11

High-throughput

0.618

High

317095

RPA1
DNA-directed RNA polymerase I subunit RPA1

1

11

High-throughput

0.618

High

854404

RPB11
DNA-directed RNA polymerase II subunit RPB11-a

1

3

High-throughput

0.618

High

854474

RPA2
DNA-directed RNA polymerase I subunit RPA2

1

9

High-throughput

0.618

High

854483

RPC2
DNA-directed RNA polymerase III subunit RPC2

1

9

High-throughput

0.618

High

854431

GL1AD
DNA-directed RNA polymerase II subunit GRINL1A, isoforms 4/5

4

1

High-throughput

0.617

High

125270

WWP2
NEDD4-like E3 ubiquitin-protein ligase WWP2

2

4

High-throughput

0.611

High

225360

MED14
Mediator of RNA polymerase II transcription subunit 14

2

3

High-throughput

0.611

High

854428

RPRD2
Regulation of nuclear pre-mRNA domain-containing protein 2

2

2

High-throughput

0.611

High

854438

SPT6H
Transcription elongation factor SPT6

2

1

High-throughput

0.611

High

854471

SFR19
Splicing factor, arginine/serine-rich 19

2

3

High-throughput

0.611

High

854491

UXT
Protein UXT

2

1

High-throughput

0.611

High

854494

GPN3
GPN-loop GTPase 3

3

7

High-throughput

0.609

High

132791

SDCB1
Syntenin-1

2

1

High-throughput

0.606

High

854461

TRAF4
TNF receptor-associated factor 4

2

2

High-throughput

0.606

High

854450

CPNE2
Copine-2

2

0

High-throughput

0.602

High

295512

RECQ5
ATP-dependent DNA helicase Q5

2

0

High-throughput

0.585

High

304598

SCAF4
SR-related and CTD-associated factor 4

2

0

High-throughput

0.585

High

854419

MED22
Mediator of RNA polymerase II transcription subunit 22

2

0

High-throughput

0.585

High

854421

MED1
Mediator of RNA polymerase II transcription subunit 1

2

0

High-throughput

0.585

High

854453

MED30
Mediator of RNA polymerase II transcription subunit 30

2

0

High-throughput

0.585

High

854459

MED10
Mediator of RNA polymerase II transcription subunit 10

2

0

High-throughput

0.585

High

854477

MED4
Mediator of RNA polymerase II transcription subunit 4

2

0

High-throughput

0.585

High

854481

MED17
Mediator of RNA polymerase II transcription subunit 17

2

0

High-throughput

0.585

High

854484

MED9
Mediator of RNA polymerase II transcription subunit 9

2

0

High-throughput

0.585

High

534083

T2FB
General transcription factor IIF subunit 2

2

1

Small-scale

0.584

High

722578

T2FA
General transcription factor IIF subunit 1

2

1

Small-scale

0.584

High

204304

MS18B
Protein Mis18-beta

2

0

High-throughput

0.580

High

280101

SNPC5
snRNA-activating protein complex subunit 5

2

0

High-throughput

0.580

High

546076

MYOG
Myogenin

2

0

High-throughput

0.580

High

854452

NTAQ1
Protein N-terminal glutamine amidohydrolase

2

0

High-throughput

0.580

High

854441

KIF2B
Kinesin-like protein KIF2B

2

1

High-throughput

0.574

High

854456

DAA10
Dynein axonemal assembly factor 10

2

1

High-throughput

0.558

High

854490

PHRF1
PHD and RING finger domain-containing protein 1

2

4

High-throughput

0.558

High

60556

VP37C
Vacuolar protein sorting-associated protein 37C

2

2

High-throughput

0.553

High

473856

MYZAP
Myocardial zonula adherens protein

2

2

High-throughput

0.549

High

803447

BAG6
Large proline-rich protein BAG6

1

1

High-throughput

0.541

High

726676

FUS
RNA-binding protein FUS

1

1

High-throughput

0.536

High

854415

SSRP1
FACT complex subunit SSRP1

1

1

High-throughput

0.536

High

854445

STYX
Serine/threonine/tyrosine-interacting protein

1

1

High-throughput

0.536

High

854458

SCAFB
Protein SCAF11

1

2

High-throughput

0.536

High

854466

WWP1
NEDD4-like E3 ubiquitin-protein ligase WWP1

1

4

High-throughput

0.536

High

854468

NELFA
Negative elongation factor A

1

1

High-throughput

0.536

High

854488

AATF
Protein AATF

1

0

Small-scale

0.529

High

473897

GRL1A
DNA-directed RNA polymerase II subunit GRINL1A

2

0

High-throughput

0.528

High

854413

SATB1
DNA-binding protein SATB1

1

2

Small-scale

0.527

High

446548

SNRPA
U1 small nuclear ribonucleoprotein A

1

0

High-throughput

0.513

High

448580

RU1C
U1 small nuclear ribonucleoprotein C

1

0

High-throughput

0.513

High

508411

TOP1
DNA topoisomerase 1

1

0

High-throughput

0.513

High

538872

RSMB
Small nuclear ribonucleoprotein-associated proteins B and B'

1

0

High-throughput

0.513

High

854408

RUXF
Small nuclear ribonucleoprotein F

1

0

High-throughput

0.513

High

854432

GTD2B
General transcription factor II-I repeat domain-containing protein 2B

1

0

High-throughput

0.513

High

854437

INT8
Integrator complex subunit 8

1

0

High-throughput

0.513

High

854446

NELFB
Negative elongation factor B

1

0

High-throughput

0.513

High

854448

TRI52
E3 ubiquitin-protein ligase TRIM52

1

0

High-throughput

0.513

High

854449

INT12
Integrator complex subunit 12

1

0

High-throughput

0.513

High

854460

MED18
Mediator of RNA polymerase II transcription subunit 18

1

0

High-throughput

0.513

High

854480

INT9
Integrator complex subunit 9

1

0

High-throughput

0.513

High

854502

MOFA1
MORF4 family-associated protein 1

1

0

High-throughput

0.513

High

179588

RPA34
DNA-directed RNA polymerase I subunit RPA34

1

1

High-throughput

0.479

High

246556

MCE1
mRNA-capping enzyme

1

2

High-throughput

0.479

High

270187

RPC9
DNA-directed RNA polymerase III subunit RPC9

1

2

High-throughput

0.479

High

270490

MED6
Mediator of RNA polymerase II transcription subunit 6

1

1

High-throughput

0.479

High

346290

MYC
Myc proto-oncogene protein

1

1

High-throughput

0.479

High

379154

MYCN
N-myc proto-oncogene protein

1

1

High-throughput

0.479

High

402722

RPC4
DNA-directed RNA polymerase III subunit RPC4

1

2

High-throughput

0.479

High

639703

IKBA
NF-kappa-B inhibitor alpha

1

1

High-throughput

0.479

High

854420

TCEA2
Transcription elongation factor A protein 2

1

6

High-throughput

0.479

High

854443

SIR6
NAD-dependent protein deacylase sirtuin-6

1

1

High-throughput

0.479

High

854465

RPA49
DNA-directed RNA polymerase I subunit RPA49

1

2

High-throughput

0.479

High

854482

RPC5
DNA-directed RNA polymerase III subunit RPC5

1

2

High-throughput

0.479

High

854489

RPA12
DNA-directed RNA polymerase I subunit RPA12

1

9

High-throughput

0.479

High

854492

ZRAN1
Ubiquitin thioesterase ZRANB1

1

2

High-throughput

0.479

High

854493

PFD2
Prefoldin subunit 2

1

1

High-throughput

0.479

High

854498

RPC10
DNA-directed RNA polymerase III subunit RPC10

1

8

High-throughput

0.479

High

854499

RPC8
DNA-directed RNA polymerase III subunit RPC8

1

5

High-throughput

0.479

High

854429

LAR1B
La-related protein 1B

1

0

High-throughput

0.460

High

854495

TEN1
Teneurin-1

1

0

Small-scale

0.460

High

749263

BRCA1
Breast cancer type 1 susceptibility protein

1

0

High-throughput

0.458

High

848176

HCFC1
Host cell factor 1

1

0

High-throughput

0.458

High

854412

HNRPU
Heterogeneous nuclear ribonucleoprotein U

1

0

High-throughput

0.458

High

854418

CUL3
Cullin-3

1

0

High-throughput

0.458

High

854422

ELAV1
ELAV-like protein 1

1

0

High-throughput

0.458

High

854423

DDB1
DNA damage-binding protein 1

1

0

High-throughput

0.458

High

854427

MEIG1
Meiosis expressed gene 1 protein homolog

1

0

High-throughput

0.458

High

854433

MED27
Mediator of RNA polymerase II transcription subunit 27

1

0

High-throughput

0.458

High

854434

INT5
Integrator complex subunit 5

1

0

High-throughput

0.458

High

854451

MED8
Mediator of RNA polymerase II transcription subunit 8

1

0

High-throughput

0.458

High

854472

MED20
Mediator of RNA polymerase II transcription subunit 20

1

0

High-throughput

0.458

High

854496

INT6
Integrator complex subunit 6

1

0

High-throughput

0.458

High

854501

RBM8A
RNA-binding protein 8A

1

0

High-throughput

0.458

High

854475

LN28A
Protein lin-28 homolog A

1

2

High-throughput

0.445

High

854406

ELOF1
Transcription elongation factor 1 homolog

1

1

Small-scale

0.437

High

854479

PDRG1
p53 and DNA damage-regulated protein 1

1

1

High-throughput

0.437

High

854435

SYDE1
Rho GTPase-activating protein SYDE1

2

0

High-throughput

0.328

High

854486

ASB6
Ankyrin repeat and SOCS box protein 6

2

0

High-throughput

0.328

High

854426

DRC12
Dynein regulatory complex protein 12

2

0

High-throughput

0.316

High

441016

CD14
Monocyte differentiation antigen CD14

1

0

High-throughput

0.282

High

454082

GIP
Gastric inhibitory polypeptide

1

0

High-throughput

0.279

Low

854414

ATP7A
Copper-transporting ATPase 1

1

0

High-throughput

0.279

Low

854416

SBP1
Methanethiol oxidase

1

0

High-throughput

0.279

Low

854424

KR197
Keratin-associated protein 19-7

1

0

High-throughput

0.279

Low

854425

GRDN
Girdin

1

0

High-throughput

0.279

Low

854442

KCD17
BTB/POZ domain-containing protein KCTD17

1

0

High-throughput

0.279

Low

854444

LRC15
Leucine-rich repeat-containing protein 15

1

0

High-throughput

0.279

Low

854447

F168A
Protein FAM168A

1

0

High-throughput

0.279

Low

854454

TET5A
Terminal nucleotidyltransferase 5A

1

0

High-throughput

0.279

Low

854463

TNG6
Transport and Golgi organization protein 6 homolog

1

0

High-throughput

0.279

Low

854497

CLC11
C-type lectin domain family 11 member A

1

0

High-throughput

0.279

Low

854436

RFPLB
Ret finger protein-like 4B

1

0

High-throughput

0.249

Low

854469

PKHA4
Pleckstrin homology domain-containing family A member 4

1

0

High-throughput

0.249

Low

854440

OFCC1
Orofacial cleft 1 candidate gene 1 protein

1

0

High-throughput

0.232

Low

854455

NEUL4
Neuralized-like protein 4

1

0

High-throughput

0.232

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024