HitPredict

Interactor 1: F4JVB9 (F4JVB9)
Cold, circadian rhythm, and RNA binding 1
Gene: RBGA6

Interactor 2: RBG7 (Q03250)
Glycine-rich RNA-binding protein 7 (AtGR-RBP7) (AtRBG7) (Glycine-rich protein 7) (AtGRP7) (Protein COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2) (Protein CCR2) (Small RNA binding protein 1) (AtSRBP1)
Gene: RBG7

Species: Arabidopsis thaliana

Source: mint

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.33	1.00	0.575

Property	Details
Experiments	23395902
Identification Methods	pull down
Interaction Type	association

Property	Details
Interacting Pfam domains	RRM_1~RRM_1
Common GO terms	GO:0003723 - RNA binding GO:0005634 - nucleus GO:1990428 - miRNA transport
Homologous interactions	16

Homologous interactions

Color coding for hit scores

	1 105 At			1 176
+	Hs
		1314966 RBM24_HUMAN (6-80): 1.33e-27: 102: 36.00		RBM38_HUMAN (5-84): 3.54e-31: 114: 41.98
+	Hs
		516495 PABP1_HUMAN (7-95): 2.88e-25: 100: 29.21		PABP4_HUMAN (9-95): 2.19e-22: 94.9: 29.89
+	Hs
		516339 PABP1_HUMAN (7-95): 2.88e-25: 100: 29.21		PABP1_HUMAN (9-97): 3.4e-22: 94.1: 30.34
+	Hs
		516689 PABP1_HUMAN (7-95): 2.88e-25: 100: 29.21		PABP3_HUMAN (9-97): 8.2e-21: 90.3: 28.09
+	Mm
		665745 PABP1_MOUSE (7-95): 2.97e-25: 100: 29.21		TIA1_MOUSE (7-105): 3.68e-18: 82.2: 23.23
+	Hs
		516518 PABP1_HUMAN (7-95): 2.88e-25: 100: 29.21		RBM39_HUMAN (3-107): 1.77e-15: 74.9: 27.62
+	Dm
		1213164 Q8IMX4_DROME (2-85): 3.57e-17: 76.9: 25.88		Q9VAX3_DROME (3-142): 1.32e-19: 86.8: 16.08
+	Dm
		1361600 Q9VAX3_DROME (2-84): 4.07e-17: 76.5: 23.26		Q9VAX3_DROME (3-142): 1.32e-19: 86.8: 16.08
+	Hs
		516471 PABP1_HUMAN (7-95): 2.88e-25: 100: 29.21		TIAR_HUMAN (10-132): 3.83e-11: 62.2: 17.07
+	Hs
		516671 RBM42_HUMAN (5-69): 6.92e-12: 62: 41.54		PABP1_HUMAN (9-97): 3.4e-22: 94.1: 30.34
+	Hs
		680439 TIAR_HUMAN (2-101): 4.61e-18: 78.8: 21.00		TIA1_HUMAN (3-86): 1.81e-11: 63.3: 17.86
+	Hs
		680422 TIA1_HUMAN (2-105): 1.45e-17: 77.7: 20.76		TIA1_HUMAN (3-86): 1.81e-11: 63.3: 17.86
+	Hs
		963504 TIAR_HUMAN (2-101): 4.61e-18: 78.8: 21.00		TIAR_HUMAN (10-132): 3.83e-11: 62.2: 17.07
+	At
		1210772 Q8H1N8_ARATH (7-63): 4.23e-15: 70.1: 52.63		UBP1C_ARATH (8-107): 2.2e-13: 68.7: 21.36
+	Hs
		1054548 RBM42_HUMAN (5-69): 6.92e-12: 62: 41.54		RBM39_HUMAN (3-107): 1.77e-15: 74.9: 27.62
+	At
		187120 RZ1C_ARATH (7-73): 4.19e-12: 62.4: 53.73		RZ1B_ARATH (4-109): 2.65e-15: 73.6: 44.34