Protein: RENT1
ATP-dependent helicase NAM7 (EC 3.6.4.12) (EC 3.6.4.13) (Nonsense-mediated mRNA decay protein 1) (Nuclear accommodation of mitochondria 7 protein) (Up-frameshift suppressor 1)

Gene: RENT1, NAM7
Organism: Saccharomyces cerevisiae S288C
Interactions: 135
UniProt ID: P30771

Gene Ontology (top 5):
GO:0000184 - nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000956 - nuclear-transcribed mRNA catabolic process
GO:0003697 - single-stranded DNA binding
GO:0003723 - RNA binding
GO:0003724 - RNA helicase activity

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

675731

NMD2
Nonsense-mediated mRNA decay protein 2

13

2

Small-scale

0.976

High

675708

RENT1
ATP-dependent helicase NAM7

2

6

Small-scale

0.783

High

675762

DCP2
m7GpppN-mRNA hydrolase

8

1

Small-scale

0.744

High

402901

ERF3
Eukaryotic peptide chain release factor GTP-binding subunit

5

7

Small-scale

0.714

High

604941

XRN1
5'-3' exoribonuclease 1

4

5

Small-scale

0.677

High

675754

UPF3
Nonsense-mediated mRNA decay protein 3

5

0

Small-scale

0.675

High

675753

LSM1
Sm-like protein LSm1

3

8

Small-scale

0.662

High

675794

DCP1
mRNA-decapping enzyme subunit 1

4

0

Small-scale

0.661

High

675795

HRP1
Nuclear polyadenylated RNA-binding protein 4

2

9

Small-scale

0.634

High

675733

NMD3
60S ribosomal export protein NMD3

3

0

Small-scale

0.615

High

675736

DHH1
ATP-dependent RNA helicase DHH1

2

10

High-throughput

0.614

High

675779

RBS1
RNA-binding suppressor of PAS kinase protein 1

3

0

Small-scale

0.613

High

675790

NMD4
Nonsense-mediated decay protein 4

3

0

Small-scale

0.609

High

624042

DBP2
ATP-dependent RNA helicase DBP2

2

4

Small-scale

0.603

High

407784

RS13
Small ribosomal subunit protein uS15

2

0

Small-scale

0.593

High

675711

PUB1
Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1

2

15

High-throughput

0.588

High

519570

ERF1
Eukaryotic peptide chain release factor subunit 1

2

2

Small-scale

0.586

High

635814

PAT1
Deadenylation-dependent mRNA-decapping factor PAT1

2

2

Small-scale

0.586

High

675743

EDC3
Enhancer of mRNA-decapping protein 3

2

2

Small-scale

0.586

High

675787

RS10A
Small ribosomal subunit protein eS10A

2

3

Small-scale

0.586

High

664400

HRR25
Casein kinase I homolog HRR25

2

0

Small-scale

0.585

High

383002

RL25
Large ribosomal subunit protein uL23

2

1

Small-scale

0.584

High

406862

RS3
Small ribosomal subunit protein uS3

2

2

Small-scale

0.584

High

631725

RS2
Small ribosomal subunit protein uS5

2

2

Small-scale

0.584

High

633921

GBP2
Serine/arginine

2

16

Small-scale

0.584

High

675766

LSM3
U6 snRNA-associated Sm-like protein LSm3

2

8

Small-scale

0.584

High

675786

SKI7
Superkiller protein 7

1

6

Small-scale

0.561

High

675776

EBS1
Nonsense-mediated mRNA decay factor EBS1

2

0

Small-scale

0.559

High

675734

KOG1
Target of rapamycin complex 1 subunit KOG1

1

1

High-throughput

0.552

High

675772

NU100
Nucleoporin NUP100/NSP100

1

3

Small-scale

0.552

High

675773

NU116
Nucleoporin NUP116/NSP116

1

2

Small-scale

0.552

High

493398

HSP72
Heat shock protein SSA2

2

7

High-throughput

0.552

High

675746

SSB2
Ribosome-associated molecular chaperone SSB2

2

9

High-throughput

0.552

High

367824

EF1A
Elongation factor 1-alpha

1

5

High-throughput

0.536

High

423588

ADH3
Alcohol dehydrogenase 3, mitochondrial

1

1

High-throughput

0.536

High

675709

XPO1
Exportin-1

1

3

High-throughput

0.536

High

675712

HSP7F
Heat shock protein homolog SSE1

1

13

High-throughput

0.536

High

675756

RL4B
Large ribosomal subunit protein uL4B

1

1

High-throughput

0.536

High

675763

BRE5
UBP3-associated protein BRE5

1

6

High-throughput

0.536

High

675770

UBP3
Ubiquitin carboxyl-terminal hydrolase 3

1

4

High-throughput

0.536

High

479975

RS6A
Small ribosomal subunit protein eS6A

2

3

Small-scale

0.535

High

675715

RSSA1
Small ribosomal subunit protein uS2A

2

3

High-throughput

0.521

High

675769

RU17
U1 small nuclear ribonucleoprotein 70 kDa homolog

1

14

Small-scale

0.508

High

675740

RS26A
Small ribosomal subunit protein eS26A

1

0

Small-scale

0.504

High

539449

UBC3
Ubiquitin-conjugating enzyme E2-34 kDa

1

1

Small-scale

0.501

High

675759

UBC9
SUMO-conjugating enzyme UBC9

1

1

Small-scale

0.501

High

675742

BOI2
Protein BOI2

1

4

High-throughput

0.494

High

141207

RS9A
Small ribosomal subunit protein uS4A

1

1

Small-scale

0.481

High

675713

TOR2
Serine/threonine-protein kinase TOR2

1

9

High-throughput

0.481

High

675723

TOR1
Serine/threonine-protein kinase TOR1

1

8

High-throughput

0.481

High

339498

CDK1
Cyclin-dependent kinase 1

1

3

High-throughput

0.479

High

376676

PABP
Polyadenylate-binding protein, cytoplasmic and nuclear

1

9

Small-scale

0.479

High

405486

RL26A
Large ribosomal subunit protein uL24A

1

4

High-throughput

0.479

High

410329

SC160
Protein SCP160

1

13

High-throughput

0.479

High

482134

RS18A
Small ribosomal subunit protein uS13A

1

1

High-throughput

0.479

High

485476

SSBP1
Single-stranded nucleic acid-binding protein

1

13

Small-scale

0.479

High

621990

SSD1
Protein SSD1

1

1

Small-scale

0.479

High

630170

RRP43
Exosome complex component RRP43

1

1

High-throughput

0.479

High

638666

SPB4
ATP-dependent rRNA helicase SPB4

1

8

High-throughput

0.479

High

644973

RL16A
Large ribosomal subunit protein uL13A

1

2

High-throughput

0.479

High

675718

CBF5
H/ACA ribonucleoprotein complex subunit CBF5

1

1

Small-scale

0.479

High

675719

LHP1
La protein homolog

1

9

Small-scale

0.479

High

675724

SKI2
Antiviral helicase SKI2

1

4

Small-scale

0.479

High

675727

NOP4
Nucleolar protein 4

1

12

Small-scale

0.479

High

675728

LSM2
U6 snRNA-associated Sm-like protein LSm2

1

2

Small-scale

0.479

High

675732

LSM12
Protein LSM12

1

2

Small-scale

0.479

High

675735

HRB1
Serine/arginine

1

15

Small-scale

0.479

High

675739

IF4F1
Eukaryotic initiation factor 4F subunit p150

1

3

Small-scale

0.479

High

675741

BEM2
GTPase-activating protein BEM2/IPL2

1

1

Small-scale

0.479

High

675744

LSM4
U6 snRNA-associated Sm-like protein LSm4

1

1

Small-scale

0.479

High

675755

RS12
Small ribosomal subunit protein eS12

1

1

High-throughput

0.479

High

675760

PRP43
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43

1

4

Small-scale

0.479

High

675761

EIF2A
Eukaryotic translation initiation factor 2A

1

2

High-throughput

0.479

High

675764

LSM7
U6 snRNA-associated Sm-like protein LSm7

1

7

Small-scale

0.479

High

675765

APJ1
J domain-containing protein APJ1

1

5

High-throughput

0.479

High

675768

NAM8
Protein NAM8

1

9

High-throughput

0.479

High

675771

RS15
Small ribosomal subunit protein uS19

1

2

High-throughput

0.479

High

675777

MTQ2
eRF1 methyltransferase catalytic subunit MTQ2

1

1

High-throughput

0.479

High

675778

DHR1
Probable ATP-dependent RNA helicase DHR1

1

6

High-throughput

0.479

High

675781

LSM6
U6 snRNA-associated Sm-like protein LSm6

1

1

Small-scale

0.479

High

675782

VAM6
Vacuolar morphogenesis protein 6

1

3

High-throughput

0.479

High

675784

PUF3
mRNA-binding protein PUF3

1

4

Small-scale

0.479

High

675785

SGO1
Shugoshin

1

2

High-throughput

0.479

High

675789

TMA46
Translation machinery-associated protein 46

1

2

High-throughput

0.479

High

675791

RIO1
Serine/threonine-protein kinase RIO1

1

1

High-throughput

0.479

High

675793

CMR1
DNA damage-binding protein CMR1

1

4

High-throughput

0.479

High

675717

UBC6
Ubiquitin-conjugating enzyme E2 6

1

0

Small-scale

0.460

High

340633

PGK
Phosphoglycerate kinase

1

0

Small-scale

0.458

High

524206

CAF20
Cap-associated protein CAF20

1

0

High-throughput

0.458

High

587294

UBR1
E3 ubiquitin-protein ligase UBR1

1

0

Small-scale

0.458

High

664683

BMH1
Protein BMH1

1

0

High-throughput

0.458

High

675725

RS27A
Small ribosomal subunit protein eS27A

1

0

High-throughput

0.458

High

675726

EAP1
Protein EAP1

1

0

High-throughput

0.458

High

675738

RBG1
Ribosome-interacting GTPase 1

1

0

Small-scale

0.458

High

675745

LSM5
U6 snRNA-associated Sm-like protein LSm5

1

0

Small-scale

0.458

High

675748

TM108
Protein TMA108

1

0

High-throughput

0.458

High

675758

PSP2
Protein PSP2

1

0

Small-scale

0.458

High

675774

RPM2
Ribonuclease P protein component, mitochondrial

1

0

Small-scale

0.458

High

675775

ESP1
Separin

1

0

High-throughput

0.458

High

333721

ADH1
Alcohol dehydrogenase 1

1

1

High-throughput

0.445

High

490572

HSP71
Heat shock protein SSA1

1

7

High-throughput

0.445

High

510531

SSB1
Ribosome-associated molecular chaperone SSB1

1

9

High-throughput

0.445

High

644844

RS5
Small ribosomal subunit protein uS7

1

1

High-throughput

0.445

High

675720

HSP78
Heat shock protein 78, mitochondrial

1

2

High-throughput

0.445

High

675730

SSZ1
Ribosome-associated complex subunit SSZ1

1

3

High-throughput

0.445

High

675792

RPN5
26S proteasome regulatory subunit RPN5

1

0

High-throughput

0.438

High

356307

H4
Histone H4

1

4

High-throughput

0.437

High

470915

RS22A
Small ribosomal subunit protein uS8A

1

1

High-throughput

0.437

High

480537

RS8A
Small ribosomal subunit protein eS8A

1

1

High-throughput

0.437

High

593117

RPAB1
DNA-directed RNA polymerases I, II, and III subunit RPABC1

1

1

Small-scale

0.437

High

655815

GAR1
H/ACA ribonucleoprotein complex subunit GAR1

1

1

Small-scale

0.437

High

661555

TF2B
Transcription initiation factor IIB

1

2

High-throughput

0.437

High

675716

SC61A
Protein transport protein SEC61

1

1

High-throughput

0.437

High

675721

RS3A1
Small ribosomal subunit protein eS1A

1

2

High-throughput

0.437

High

675729

PAF1
RNA polymerase II-associated protein 1

1

1

Small-scale

0.437

High

675737

LAA1
AP-1 accessory protein LAA1

1

2

High-throughput

0.437

High

675750

UTP10
U3 small nucleolar RNA-associated protein 10

1

1

High-throughput

0.437

High

675751

RPN11
Ubiquitin carboxyl-terminal hydrolase RPN11

1

5

High-throughput

0.437

High

675767

NUM1
Nuclear migration protein NUM1

1

2

High-throughput

0.437

High

675780

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

1

High-throughput

0.437

High

675783

NOP6
Nucleolar protein 6

1

1

Small-scale

0.437

High

410941

PDC1
Pyruvate decarboxylase isozyme 1

1

0

High-throughput

0.426

High

421594

FAS1
Fatty acid synthase subunit beta

1

0

High-throughput

0.426

High

424388

PYR1
Multifunctional protein URA2

1

0

High-throughput

0.426

High

555874

VATB
V-type proton ATPase subunit B

1

0

High-throughput

0.426

High

675747

6P21
6-phosphofructo-2-kinase 1

1

0

High-throughput

0.426

High

675749

MPG1
Mannose-1-phosphate guanyltransferase

1

0

High-throughput

0.426

High

675752

PFD1
Prefoldin subunit 1

1

0

High-throughput

0.426

High

675757

RIR4
Ribonucleoside-diphosphate reductase small chain 2

1

0

High-throughput

0.426

High

675710

EF2
Elongation factor 2

1

2

High-throughput

0.407

High

675722

GCN1
eIF-2-alpha kinase activator GCN1

1

2

High-throughput

0.407

High

633833

SGF29
SAGA-associated factor 29

1

0

High-throughput

0.279

Low

675714

RU1A
U1 small nuclear ribonucleoprotein A

1

0

High-throughput

0.249

Low

675788

AP3D
AP-3 complex subunit delta

1

0

High-throughput

0.249

Low


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Last updated: 15 Jul 2024