HitPredict - High confidence protein-protein interactions

Download interactions: TXT MITAB-2.5

Interaction	Interactor	Experiments	Homologs	Category	Interaction Score	Confidence
627716	NAP1 Nucleosome assembly protein	15	19	Small-scale	0.981	High
983753	SWR1 Helicase SWR1	11	20	Small-scale	0.975	High
355708	H2B1 Histone H2B.1	11	20	Small-scale	0.975	High
976146	VPS72 Vacuolar protein sorting-associated protein 72	9	7	Small-scale	0.972	High
902164	H3 Histone H3	10	20	Small-scale	0.970	High
356810	H4 Histone H4	10	15	Small-scale	0.969	High
356059	H2B2 Histone H2B.2	10	20	Small-scale	0.967	High
392232	H2A1 Histone H2A.1	6	15	Small-scale	0.950	High
392620	H2A2 Histone H2A.2	7	14	Small-scale	0.946	High
858862	IMB5 Importin subunit beta-5	6	10	Small-scale	0.938	High
766996	CHZ1 Histone H2A.Z-specific chaperone CHZ1	9	0	Small-scale	0.910	High
1015724	H2AZ Histone H2A.Z	3	17	Small-scale	0.871	High
692987	SPT16 FACT complex subunit SPT16	3	8	Small-scale	0.853	High
744936	ISW1 ISWI chromatin-remodeling complex ATPase ISW1	3	20	High-throughput	0.817	High
946169	ARP4 Actin-related protein 4	8	17	Small-scale	0.746	High
978066	RUVB1 RuvB-like protein 1	8	13	Small-scale	0.746	High
679813	SWC3 SWR1-complex protein 3	7	1	Small-scale	0.742	High
860116	SWC4 SWR1-complex protein 4	7	3	Small-scale	0.742	High
1015643	RUVB2 RuvB-like protein 2	7	13	Small-scale	0.742	High
689995	ASF1 Histone chaperone ASF1	2	1	Small-scale	0.737	High
696275	STH1 Nuclear protein STH1/NPS1	2	20	High-throughput	0.737	High
697461	CHD1 Chromo domain-containing protein 1	2	20	High-throughput	0.737	High
767773	IMB4 Importin subunit beta-4	2	9	Small-scale	0.737	High
979872	POB3 FACT complex subunit POB3	2	11	High-throughput	0.737	High
728789	BDF1 Bromodomain-containing factor 1	6	20	Small-scale	0.727	High
866334	AF9 Protein AF-9 homolog	5	7	Small-scale	0.714	High
887728	ACT Actin	5	8	Small-scale	0.712	High
1015688	ARP6 Actin-like protein ARP6	5	11	Small-scale	0.706	High
976394	VPS71 Vacuolar protein sorting-associated protein 71	6	0	Small-scale	0.699	High
678759	RAD16 DNA repair protein RAD16	1	18	High-throughput	0.691	High
748526	SWC5 SWR1-complex protein 5	4	7	Small-scale	0.691	High
862754	H1 Histone H1	4	1	Small-scale	0.685	High
988743	SWC7 SWR1-complex protein 7	3	1	Small-scale	0.656	High
976011	GCN5 Histone acetyltransferase GCN5	3	20	Small-scale	0.641	High
866882	HDA1 Histone deacetylase HDA1	2	14	Small-scale	0.633	High
772365	ATAD2 ATPase histone chaperone YTA7	3	6	High-throughput	0.633	High
861553	RT102 Regulator of Ty1 transposition protein 102	3	2	Small-scale	0.633	High
1014971	IOC2 ISWI one complex protein 2	3	1	High-throughput	0.633	High
768365	NCB1 Negative cofactor 2 complex subunit alpha	1	1	Small-scale	0.618	High
872840	ORC1 Origin recognition complex subunit 1	1	10	High-throughput	0.618	High
986319	SFH1 Chromatin structure-remodeling complex subunit SFH1	1	5	High-throughput	0.618	High
987860	IRC20 Uncharacterized ATP-dependent helicase IRC20	1	20	High-throughput	0.618	High
755479	TRA1 Transcription-associated protein 1	2	8	Small-scale	0.601	High
797199	EPL1 Enhancer of polycomb-like protein 1	2	4	Small-scale	0.601	High
996191	ESA1 Histone acetyltransferase ESA1	2	20	Small-scale	0.585	High
420197	TOP2 DNA topoisomerase 2	2	8	High-throughput	0.584	High
710460	SAS3 Histone acetyltransferase SAS3	2	18	Small-scale	0.584	High
743077	GBLP Small ribosomal subunit protein RACK1	2	7	High-throughput	0.584	High
544659	HSC82 ATP-dependent molecular chaperone HSC82	3	3	High-throughput	0.578	High
667659	MCM2 DNA replication licensing factor MCM2	1	20	High-throughput	0.575	High
687777	BTAF1 TATA-binding protein-associated factor MOT1	1	20	High-throughput	0.575	High
733328	SET3 SET domain-containing protein 3	1	11	High-throughput	0.575	High
770123	RT106 Histone chaperone RTT106	1	1	High-throughput	0.575	High
810384	SET2 Histone-lysine N-methyltransferase, H3 lysine-36 specific	1	13	High-throughput	0.575	High
858595	TAF6 Transcription initiation factor TFIID subunit 6	1	2	High-throughput	0.575	High
979005	IOC4 ISWI one complex protein 4	1	1	High-throughput	0.575	High
987582	RSC2 Chromatin structure-remodeling complex subunit RSC2	1	20	High-throughput	0.575	High
996427	ISW2 ISWI chromatin-remodeling complex ATPase ISW2	1	20	High-throughput	0.575	High
527084	TBP TATA-box-binding protein	2	2	Small-scale	0.571	High
635545	RSC6 Chromatin structure-remodeling complex protein RSC6	2	3	High-throughput	0.571	High
698706	RSC7 Chromatin structure-remodeling complex subunit RSC7	2	1	High-throughput	0.571	High
716398	SPT10 Protein SPT10	2	1	High-throughput	0.571	High
757382	FKBP3 Peptidyl-prolyl cis-trans isomerase	2	7	High-throughput	0.571	High
797979	RSC8 Chromatin structure-remodeling complex protein RSC8	2	11	High-throughput	0.571	High
969450	RSC4 Chromatin structure-remodeling complex subunit RSC4	2	20	High-throughput	0.571	High
973839	HOS3 Histone deacetylase HOS3	2	17	High-throughput	0.571	High
974772	RSC9 Chromatin structure-remodeling complex subunit RSC9	2	2	High-throughput	0.571	High
986497	FKBP4 FK506-binding protein 4	2	7	High-throughput	0.571	High
991246	BDF2 Bromodomain-containing factor 2	2	20	High-throughput	0.571	High
1015573	ARP7 Actin-related protein 7	2	15	High-throughput	0.571	High
1014896	TAF10 Transcription initiation factor TFIID subunit 10	2	0	Small-scale	0.547	High
514225	NHP6A Non-histone chromosomal protein 6A	1	20	High-throughput	0.541	High
513344	SSB1 Ribosome-associated molecular chaperone SSB1	1	8	High-throughput	0.536	High
705851	HSP78 Heat shock protein 78, mitochondrial	2	4	High-throughput	0.521	High
810754	NET1 Nucleolar protein NET1	2	1	High-throughput	0.521	High
412495	KIN28 Serine/threonine-protein kinase KIN28	1	6	High-throughput	0.501	High
605608	DBF2 Cell cycle protein kinase DBF2	1	12	Small-scale	0.501	High
693079	RPD3 Histone deacetylase RPD3	1	15	Small-scale	0.501	High
978111	CTK1 CTD kinase subunit alpha	1	10	High-throughput	0.501	High
732602	T2EA Transcription initiation factor IIE subunit alpha	1	0	High-throughput	0.493	High
733995	RPF2 Ribosome biogenesis protein RPF2	1	2	High-throughput	0.489	High
859470	PRP43 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43	1	4	High-throughput	0.489	High
973526	ELP3 Elongator complex protein 3	1	0	Small-scale	0.480	High
981033	NAA40 N-alpha-acetyltransferase 40	1	0	High-throughput	0.480	High
367147	HSP82 ATP-dependent molecular chaperone HSP82	1	3	High-throughput	0.479	High
375547	RPB1 DNA-directed RNA polymerase II subunit RPB1	1	6	High-throughput	0.479	High
407417	RS3 Small ribosomal subunit protein uS3	1	4	High-throughput	0.479	High
419510	PDE2 3',5'-cyclic-nucleotide phosphodiesterase 2	1	2	High-throughput	0.479	High
589324	FKBP FK506-binding protein 1	1	7	Small-scale	0.479	High
601779	RCC1 Guanine nucleotide exchange factor SRM1	1	5	Small-scale	0.479	High
607372	RFA1 Replication factor A protein 1	1	5	Small-scale	0.479	High
612187	APN1 Apurinic-apyrimidinic endonuclease 1	1	1	High-throughput	0.479	High
663773	TF2B Transcription initiation factor IIB	1	2	High-throughput	0.479	High
668176	RIF1 Telomere length regulator protein RIF1	1	2	Small-scale	0.479	High
681116	HS104 Heat shock protein 104	1	4	High-throughput	0.479	High
698194	AFG2 ATPase family gene 2 protein	1	3	Small-scale	0.479	High
716532	SPT21 Protein SPT21	1	1	High-throughput	0.479	High
728351	DEF1 RNA polymerase II degradation factor 1	1	3	Small-scale	0.479	High
732819	BYE1 Transcription factor BYE1	1	2	High-throughput	0.479	High
744986	CHK1 Serine/threonine-protein kinase CHK1	1	2	High-throughput	0.479	High
746465	LDB7 Chromatin structure-remodeling complex protein RSC14	1	1	High-throughput	0.479	High
766376	SNU13 13 kDa ribonucleoprotein-associated protein	1	3	High-throughput	0.479	High
774027	MLP2 Protein MLP2	1	18	High-throughput	0.479	High
774975	MAM33 Mitochondrial acidic protein MAM33	1	1	High-throughput	0.479	High
775302	ULP2 Ubiquitin-like-specific protease 2	1	3	High-throughput	0.479	High
866590	APJ1 J domain-containing protein APJ1	1	6	High-throughput	0.479	High
971004	ABF2 ARS-binding factor 2, mitochondrial	1	20	High-throughput	0.479	High
978149	HMO1 High mobility group protein 1	1	20	High-throughput	0.479	High
980186	ERB1 Ribosome biogenesis protein ERB1	1	6	High-throughput	0.479	High
982964	TAF9 Transcription initiation factor TFIID subunit 9	1	1	Small-scale	0.479	High
987083	TFC6 Transcription factor tau 91 kDa subunit	1	1	High-throughput	0.479	High
995854	SGO1 Shugoshin	1	1	High-throughput	0.479	High
1015220	PSH1 RING finger protein PSH1	1	6	Small-scale	0.479	High
1015693	CMR1 DNA damage-binding protein CMR1	1	13	High-throughput	0.479	High
1015725	HTL1 High temperature lethal protein 1	1	1	Small-scale	0.479	High
693898	SRP40 Suppressor protein SRP40	1	4	High-throughput	0.470	High
804934	SYEC Glutamate--tRNA ligase, cytoplasmic	1	3	High-throughput	0.470	High
987369	CORO Coronin-like protein	1	5	High-throughput	0.470	High
1015435	SMT3 Ubiquitin-like protein SMT3	1	0	High-throughput	0.460	High
698992	GSP1 GTP-binding nuclear protein GSP1/CNR1	1	0	High-throughput	0.458	High
759482	STM1 Suppressor protein STM1	1	0	Small-scale	0.458	High
979500	YD514 Uncharacterized protein YDR514C	1	0	Small-scale	0.458	High
979821	DPB4 DNA polymerase epsilon subunit D	1	0	Small-scale	0.458	High
987124	VPS74 Vacuolar protein sorting-associated protein 74	1	0	High-throughput	0.458	High
996031	IES4 Ino eighty subunit 4	1	0	Small-scale	0.458	High
1015000	MLH3 DNA mismatch repair protein MLH3	1	0	High-throughput	0.458	High
419416	HAP2 Transcriptional activator HAP2	1	1	High-throughput	0.445	High
457092	SWI6 Regulatory protein SWI6	1	7	High-throughput	0.445	High
492960	HSP71 Heat shock protein SSA1	1	8	High-throughput	0.445	High
495405	HSP72 Heat shock protein SSA2	1	8	High-throughput	0.445	High
515096	MCM1 Pheromone receptor transcription factor	1	2	High-throughput	0.445	High
605274	AFT1 Iron-regulated transcriptional activator AFT1	1	1	High-throughput	0.445	High
622207	MCM3 DNA replication licensing factor MCM3	1	20	High-throughput	0.445	High
628915	SWI4 Regulatory protein SWI4	1	7	High-throughput	0.445	High
633728	MAS5 Mitochondrial protein import protein MAS5	1	6	High-throughput	0.445	High
667906	MCM5 Minichromosome maintenance protein 5	1	20	High-throughput	0.445	High
690648	FKBP2 Peptidyl-prolyl cis-trans isomerase FPR2	1	5	High-throughput	0.445	High
695892	HSP7F Heat shock protein homolog SSE1	1	13	High-throughput	0.445	High
710255	YOX1 Homeobox protein YOX1	1	3	High-throughput	0.445	High
715767	TAF14 Transcription initiation factor TFIID subunit 14	1	7	High-throughput	0.445	High
744722	TAF5 Transcription initiation factor TFIID subunit 5	1	7	High-throughput	0.445	High
754270	RSC30 Chromatin structure-remodeling complex protein RSC30	1	4	High-throughput	0.445	High
761357	CAJ1 Protein CAJ1	1	7	High-throughput	0.445	High
766434	EAF5 Chromatin modification-related protein EAF5	1	2	Small-scale	0.445	High
769898	SSB2 Ribosome-associated molecular chaperone SSB2	1	8	High-throughput	0.445	High
797767	IOC3 ISWI one complex protein 3	1	2	High-throughput	0.445	High
805259	TAF1 Transcription initiation factor TFIID subunit 1	1	1	High-throughput	0.445	High
810792	SMC3 Structural maintenance of chromosomes protein 3	1	4	High-throughput	0.445	High
837509	TAF4 Transcription initiation factor TFIID subunit 4	1	3	High-throughput	0.445	High
859037	MCM6 DNA replication licensing factor MCM6	1	20	High-throughput	0.445	High
859364	ITC1 Imitation switch two complex protein 1	1	5	High-throughput	0.445	High
872895	ORC3 Origin recognition complex subunit 3	1	1	High-throughput	0.445	High
961535	CDC14 Tyrosine-protein phosphatase CDC14	1	2	High-throughput	0.445	High
970988	TBF1 Protein TBF1	1	1	High-throughput	0.445	High
977028	YE11B Transposon Ty1-ER1 Gag-Pol polyprotein	1	1	High-throughput	0.445	High
977549	TAF12 Transcription initiation factor TFIID subunit 12	1	1	High-throughput	0.445	High
977725	GIS1 Transcriptional activator/repressor GIS1	1	3	High-throughput	0.445	High
981166	RCO1 Transcriptional regulatory protein RCO1	1	20	High-throughput	0.445	High
983306	ARP9 Actin-like protein ARP9	1	12	High-throughput	0.445	High
988521	RSC3 Chromatin structure-remodeling complex protein RSC3	1	4	High-throughput	0.445	High
993159	RSC58 Chromatin structure-remodeling complex protein RSC58	1	1	High-throughput	0.445	High
1015553	ARP8 Actin-like protein ARP8	1	12	High-throughput	0.445	High
1015592	EAF3 Chromatin modification-related protein EAF3	1	7	High-throughput	0.445	High
1015675	RLF2 Chromatin assembly factor 1 subunit p90	1	3	High-throughput	0.445	High
141598	RS9A Small ribosomal subunit protein uS4A	1	1	High-throughput	0.437	High
342267	ATP6 ATP synthase subunit a	1	1	Small-scale	0.437	High
358331	RS17A Small ribosomal subunit protein eS17A	1	3	High-throughput	0.437	High
383429	RL25 Large ribosomal subunit protein uL23	1	2	High-throughput	0.437	High
405902	RL26A Large ribosomal subunit protein uL24A	1	5	High-throughput	0.437	High
408201	RS13 Small ribosomal subunit protein uS15	1	2	High-throughput	0.437	High
413788	RS14A Small ribosomal subunit protein uS11A	1	1	High-throughput	0.437	High
426224	RS19A Small ribosomal subunit protein eS19A	1	4	High-throughput	0.437	High
471331	RS22A Small ribosomal subunit protein uS8A	1	1	High-throughput	0.437	High
472469	RL31A Large ribosomal subunit protein eL31A	1	3	High-throughput	0.437	High
480395	RS6A Small ribosomal subunit protein eS6A	1	3	High-throughput	0.437	High
480962	RS8A Small ribosomal subunit protein eS8A	1	2	High-throughput	0.437	High
632168	RS2 Small ribosomal subunit protein uS5	1	3	High-throughput	0.437	High
634844	KRR1 KRR1 small subunit processome component	1	5	High-throughput	0.437	High
638911	SPB4 ATP-dependent rRNA helicase SPB4	1	8	High-throughput	0.437	High
645729	RS7A Small ribosomal subunit protein eS7A	1	2	High-throughput	0.437	High
700706	RSSA1 Small ribosomal subunit protein uS2A	1	1	High-throughput	0.437	High
706572	RS3A1 Small ribosomal subunit protein eS1A	1	2	High-throughput	0.437	High
730192	RS27A Small ribosomal subunit protein eS27A	1	1	High-throughput	0.437	High
737246	LONM Lon protease homolog, mitochondrial	1	3	High-throughput	0.437	High
752746	RS20 Small ribosomal subunit protein uS10	1	1	High-throughput	0.437	High
754231	CIC1 Proteasome-interacting protein CIC1	1	2	High-throughput	0.437	High
762702	LAA1 AP-1 accessory protein LAA1	1	1	High-throughput	0.437	High
765117	IF4F1 Eukaryotic initiation factor 4F subunit p150	1	1	High-throughput	0.437	High
776558	RLP7 Ribosome biogenesis protein RLP7	1	2	High-throughput	0.437	High
865337	GIS2 Zinc finger protein GIS2	1	2	High-throughput	0.437	High
866824	SAM50 Sorting assembly machinery 50 kDa subunit	1	1	High-throughput	0.437	High
967844	RS15 Small ribosomal subunit protein uS19	1	4	High-throughput	0.437	High
982720	COX20 Cytochrome c oxidase assembly protein COX20, mitochondrial	1	2	High-throughput	0.437	High
994478	BRX1 Ribosome biogenesis protein BRX1	1	7	High-throughput	0.437	High
996367	RS10A Small ribosomal subunit protein eS10A	1	3	High-throughput	0.437	High
540663	CYPH Peptidyl-prolyl cis-trans isomerase	1	0	High-throughput	0.426	High
809645	YPP1 Cargo-transport protein YPP1	1	0	High-throughput	0.426	High
872861	MOT3 Transcriptional activator/repressor MOT3	1	0	High-throughput	0.426	High
989518	RAF Trans-acting factor D	1	0	High-throughput	0.426	High
993245	CDC45 Cell division control protein 45	1	0	High-throughput	0.426	High
619651	MPCP Mitochondrial phosphate carrier protein	1	4	High-throughput	0.407	High
707961	GCN1 eIF-2-alpha kinase activator GCN1	1	8	High-throughput	0.407	High
767448	UTP7 U3 small nucleolar RNA-associated protein 7	1	6	High-throughput	0.407	High
775693	DJP1 DnaJ-like protein 1	1	7	High-throughput	0.407	High
798402	CSK2B Casein kinase II subunit beta	1	2	High-throughput	0.407	High
805177	STU2 Protein STU2	1	3	High-throughput	0.407	High
817303	HLJ1 Protein HLJ1	1	3	High-throughput	0.407	High
988627	SWA2 Auxilin-like clathrin uncoating factor SWA2	1	1	High-throughput	0.407	High
811267	MPS3 Spindle pole body assembly component MPS3	6	0	Small-scale	0.382	High
873202	TMEDA Endoplasmic reticulum vesicle protein 25	1	0	High-throughput	0.269	Low
482531	RS18A Small ribosomal subunit protein uS13A	1	0	High-throughput	0.249	Low
660395	PEX3 Peroxisomal biogenesis factor 3	1	0	High-throughput	0.249	Low
860426	EIF2A Eukaryotic translation initiation factor 2A	1	0	High-throughput	0.249	Low
994456	YO075 Uncharacterized ABC transporter ATP-binding protein/permease YOL075C	1	0	Small-scale	0.249	Low
410843	ILV5 Ketol-acid reductoisomerase, mitochondrial	1	0	High-throughput	0.232	Low
423494	PUR2 Bifunctional purine biosynthetic protein ADE5,7 [Includes: Phosphoribosylamine--glycine ligase	1	0	High-throughput	0.232	Low
580599	FAS2 Fatty acid synthase subunit alpha	1	0	High-throughput	0.232	Low
604907	GAS1 1,3-beta-glucanosyltransferase GAS1	1	0	High-throughput	0.232	Low
741220	GLYC Serine hydroxymethyltransferase, cytosolic	1	0	High-throughput	0.232	Low
810220	PFD1 Prefoldin subunit 1	1	0	High-throughput	0.232	Low
814739	LCF4 Long-chain-fatty-acid--CoA ligase 4	1	0	High-throughput	0.232	Low