Protein: RL1D1
Ribosome biogenesis protein UTP30 (U3 snoRNP-associated protein UTP30)

Gene: RL1D1, UTP30
Organism: Saccharomyces cerevisiae S288C
Interactions: 92
UniProt ID: P36144

Gene Ontology (top 5):
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000470 - maturation of LSU-rRNA
GO:0003723 - RNA binding
GO:0005634 - nucleus
GO:0005730 - nucleolus

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

733596

DHR1
Probable ATP-dependent RNA helicase DHR1

4

3

Small-scale

0.873

High

733575

MTR4
ATP-dependent RNA helicase DOB1

2

4

Small-scale

0.754

High

634556

KRR1
KRR1 small subunit processome component

5

2

High-throughput

0.716

High

635568

PWP2
Periodic tryptophan protein 2

5

7

Small-scale

0.716

High

733607

NOC4
Nucleolar complex protein 4

5

4

Small-scale

0.709

High

733579

UTP22
U3 small nucleolar RNA-associated protein 22

4

1

High-throughput

0.697

High

733620

NOP58
Nucleolar protein 58

4

4

High-throughput

0.686

High

733562

ENP1
Essential nuclear protein 1

4

1

Small-scale

0.672

High

733568

UTP18
U3 small nucleolar RNA-associated protein 18

3

0

High-throughput

0.641

High

593624

DBP4
ATP-dependent RNA helicase HCA4

1

6

High-throughput

0.618

High

733574

ROK1
ATP-dependent RNA helicase ROK1

1

1

High-throughput

0.618

High

733578

RS12
Small ribosomal subunit protein eS12

1

1

High-throughput

0.618

High

733603

SGD1
Suppressor of glycerol defect protein 1

2

1

High-throughput

0.614

High

733559

RPF2
Ribosome biogenesis protein RPF2

2

2

High-throughput

0.601

High

733571

FAF1
Protein FAF1

2

0

Small-scale

0.585

High

733573

UTP10
U3 small nucleolar RNA-associated protein 10

2

1

High-throughput

0.584

High

733584

NAT10
RNA cytidine acetyltransferase

2

1

High-throughput

0.584

High

733598

UTP14
U3 small nucleolar RNA-associated protein 14

2

2

High-throughput

0.584

High

733609

UTP4
U3 small nucleolar RNA-associated protein 4

2

8

Small-scale

0.584

High

733614

BMS1
Ribosome biogenesis protein BMS1

2

2

High-throughput

0.584

High

470992

RS22A
Small ribosomal subunit protein uS8A

2

3

High-throughput

0.533

High

733583

SQS1
Protein SQS1

1

0

High-throughput

0.518

High

733594

SXM1
Importin beta SMX1

1

0

High-throughput

0.513

High

659773

SBA1
Co-chaperone protein SBA1

1

0

Small-scale

0.504

High

733593

CSN9
COP9 signalosome complex subunit 9

1

0

High-throughput

0.486

High

383076

RL25
Large ribosomal subunit protein uL23

1

1

High-throughput

0.479

High

406966

RS3
Small ribosomal subunit protein uS3

1

2

High-throughput

0.479

High

407850

RS13
Small ribosomal subunit protein uS15

1

2

High-throughput

0.479

High

413440

RS14A
Small ribosomal subunit protein uS11A

1

2

High-throughput

0.479

High

425885

RS19A
Small ribosomal subunit protein eS19A

1

2

High-throughput

0.479

High

472136

RL31A
Large ribosomal subunit protein eL31A

1

2

High-throughput

0.479

High

630473

RRP7
Ribosomal RNA-processing protein 7

1

1

High-throughput

0.479

High

645000

RL16A
Large ribosomal subunit protein uL13A

1

2

High-throughput

0.479

High

661939

TF2B
Transcription initiation factor IIB

1

2

High-throughput

0.479

High

700060

IMP3
U3 small nucleolar ribonucleoprotein protein IMP3

1

2

High-throughput

0.479

High

700343

RSSA1
Small ribosomal subunit protein uS2A

1

3

High-throughput

0.479

High

706205

RS3A1
Small ribosomal subunit protein eS1A

1

2

High-throughput

0.479

High

707076

DCA13
Protein SOF1

1

7

High-throughput

0.479

High

711028

UTP11
U3 small nucleolar RNA-associated protein 11

1

1

High-throughput

0.479

High

715916

UTP20
U3 small nucleolar RNA-associated protein 20

1

1

High-throughput

0.479

High

729846

RS27A
Small ribosomal subunit protein eS27A

1

1

High-throughput

0.479

High

733560

GBLP
Small ribosomal subunit protein RACK1

1

6

High-throughput

0.479

High

733565

UTP7
U3 small nucleolar RNA-associated protein 7

1

3

High-throughput

0.479

High

733572

DSN1
Kinetochore-associated protein DSN1

1

1

High-throughput

0.479

High

733576

MPP10
U3 small nucleolar RNA-associated protein MPP10

1

3

High-throughput

0.479

High

733581

ESF2
Pre-rRNA-processing protein ESF2

1

1

High-throughput

0.479

High

733585

NOP15
Ribosome biogenesis protein 15

1

3

High-throughput

0.479

High

733586

IMP4
U3 small nucleolar ribonucleoprotein protein IMP4

1

5

High-throughput

0.479

High

733588

RS15
Small ribosomal subunit protein uS19

1

2

High-throughput

0.479

High

733591

UTP17
NET1-associated nuclear protein 1

1

10

High-throughput

0.479

High

733595

UTP5
U3 small nucleolar RNA-associated protein 5

1

4

High-throughput

0.479

High

733597

UTP15
U3 small nucleolar RNA-associated protein 15

1

6

High-throughput

0.479

High

733599

RRP5
rRNA biogenesis protein RRP5

1

1

High-throughput

0.479

High

733600

FCF1
rRNA-processing protein FCF1

1

1

High-throughput

0.479

High

733601

UTP13
U3 small nucleolar RNA-associated protein 13

1

9

High-throughput

0.479

High

733602

UTP21
U3 small nucleolar RNA-associated protein 21

1

8

High-throughput

0.479

High

733604

NEP1
Ribosomal RNA small subunit methyltransferase NEP1

1

1

High-throughput

0.479

High

733606

RRP9
Ribosomal RNA-processing protein 9

1

6

High-throughput

0.479

High

733608

BFR2
Protein BFR2

1

1

High-throughput

0.479

High

733616

SAS10
Something about silencing protein 10

1

1

High-throughput

0.479

High

733617

UTP12
U3 small nucleolar RNA-associated protein 12

1

7

High-throughput

0.479

High

733619

NOP56
Nucleolar protein 56

1

4

High-throughput

0.479

High

733621

RRP12
Ribosomal RNA-processing protein 12

1

2

High-throughput

0.479

High

733624

NOP14
Nucleolar complex protein 14

1

2

High-throughput

0.479

High

733563

UTP9
U3 small nucleolar RNA-associated protein 9

1

0

High-throughput

0.458

High

733566

LCP5
U3 small nucleolar ribonucleoprotein protein LCP5

1

0

High-throughput

0.458

High

733569

RRT14
Regulator of rDNA transcription protein 14

1

0

High-throughput

0.458

High

733570

UTP25
U3 small nucleolar RNA-associated protein 25

1

0

High-throughput

0.458

High

733577

NOL10
Ribosome biogenesis protein ENP2

1

0

High-throughput

0.458

High

733580

UTP8
U3 small nucleolar RNA-associated protein 8

1

0

High-throughput

0.458

High

733582

CSL4
Exosome complex component CSL4

1

0

High-throughput

0.458

High

733590

UTP6
U3 small nucleolar RNA-associated protein 6

1

0

High-throughput

0.458

High

733592

TOM1
E3 ubiquitin-protein ligase TOM1

1

0

High-throughput

0.458

High

733605

ESF1
Pre-rRNA-processing protein ESF1

1

0

High-throughput

0.458

High

733612

RCL1
RNA 3'-terminal phosphate cyclase-like protein

1

0

High-throughput

0.458

High

733613

UTP16
U3 small nucleolar RNA-associated protein 16

1

0

High-throughput

0.458

High

733615

FCF2
rRNA-processing protein FCF2

1

0

High-throughput

0.458

High

733618

RRP42
Exosome complex component RRP42

1

0

High-throughput

0.458

High

733622

EFG1P
rRNA-processing protein EFG1

1

0

High-throughput

0.458

High

733567

SSB2
Ribosome-associated molecular chaperone SSB2

1

2

High-throughput

0.445

High

733587

H3
Histone H3

1

2

High-throughput

0.445

High

358002

RS17A
Small ribosomal subunit protein eS17A

1

1

High-throughput

0.437

High

586130

PMA2
Plasma membrane ATPase 2

1

1

High-throughput

0.437

High

733564

LAA1
AP-1 accessory protein LAA1

1

1

High-throughput

0.437

High

733610

VAM6
Vacuolar morphogenesis protein 6

1

1

High-throughput

0.437

High

733623

RS22B
Small ribosomal subunit protein uS8B

1

3

High-throughput

0.437

High

733589

RSC4
Chromatin structure-remodeling complex subunit RSC4

1

2

High-throughput

0.407

High

482204

RS18A
Small ribosomal subunit protein uS13A

1

0

High-throughput

0.249

Low

528322

CAPZB
F-actin-capping protein subunit beta

1

0

High-throughput

0.249

Low

543558

HSC82
ATP-dependent molecular chaperone HSC82

1

0

High-throughput

0.249

Low

733561

NU170
Nucleoporin NUP170

1

0

High-throughput

0.249

Low

733611

HBT1
Protein HBT1

1

0

High-throughput

0.249

Low


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Last updated: 15 Jul 2024