HitPredict

Interactor 1: PIF4 (Q8W2F3)
Transcription factor PIF4 (Basic helix-loop-helix protein 9) (AtbHLH9) (bHLH 9) (Phytochrome-interacting factor 4) (Short under red-light 2) (Transcription factor EN 102) (bHLH transcription factor bHLH009)
Gene: PIF4

Interactor 2: RGA (Q9SLH3)
DELLA protein RGA (GAI-related sequence) (GRAS family protein 10) (AtGRAS-10) (Repressor on the ga1-3 mutant) (Restoration of growth on ammonia protein 1)
Gene: RGA

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.69	0.60	0.646

Property	Details
Experiments	18216857, 20093430
Identification Methods	pull down, affinity chromatography technology, two hybrid, bimolecular fluorescence complementation, anti tag coimmunoprecipitation
Interaction Type	direct interaction, physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003700 - DNA-binding transcription factor activity GO:0005634 - nucleus GO:0009409 - response to cold GO:0009723 - response to ethylene GO:1990841 - promoter-specific chromatin binding
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 430 At			1 587
+	At
		1210200 PIF1_ARATH (24-410): 9.96e-38: 144: 25.73		RGA_ARATH (1-587): 0: 771: 100.00
+	At
		1258895 PIF4_ARATH (1-430): 2.4e-73: 238: 100.00		GAI_ARATH (19-584): 0: 677: 75.09
+	At
		1226061 PIF6_ARATH (11-430): 4.24e-37: 140: 17.38		RGA_ARATH (1-587): 0: 771: 100.00
+	At
		1321460 EGL1_ARATH (27-391): 2.39e-34: 136: 15.28		RGA_ARATH (1-587): 0: 771: 100.00
+	At
		1324665 GL3_ARATH (52-335): 4.88e-31: 127: 16.39		RGA_ARATH (1-587): 0: 771: 100.00
+	At
		1209694 PIF4_ARATH (1-430): 2.4e-73: 238: 100.00		RGL2_ARATH (1-583): 0: 655: 56.20
+	At
		1321458 EGL1_ARATH (27-391): 2.39e-34: 136: 15.28		GAI_ARATH (19-584): 0: 677: 75.09
+	At
		1210137 UNE10_ARATH (96-410): 1.13e-33: 132: 24.84		GAI_ARATH (19-584): 0: 677: 75.09
+	At
		1321423 BH049_ARATH (152-373): 4.12e-32: 129: 21.55		GAI_ARATH (19-584): 0: 677: 75.09
+	At
		1324661 GL3_ARATH (52-335): 4.88e-31: 127: 16.39		GAI_ARATH (19-584): 0: 677: 75.09
+	At
		1209686 PIF1_ARATH (24-410): 9.96e-38: 144: 25.73		RGL2_ARATH (1-583): 0: 655: 56.20
+	At
		1209688 PIF6_ARATH (11-430): 4.24e-37: 140: 17.38		RGL2_ARATH (1-583): 0: 655: 56.20
+	At
		1209685 BH063_ARATH (73-395): 3.15e-34: 132: 16.31		RGL2_ARATH (1-583): 0: 655: 56.20
+	At
		1209708 SPT_ARATH (105-396): 6.97e-30: 121: 23.20		RGL2_ARATH (1-583): 0: 655: 56.20
+	At
		1209827 BH063_ARATH (73-395): 3.15e-34: 132: 16.31		RGL1_ARATH (1-583): 0: 624: 55.75
+	At
		1209081 BEE3_ARATH (106-344): 4.3e-34: 129: 19.51		SCL30_ARATH (136-583): 5.98e-152: 451: 24.79
+	At
		1248115 LRL2_ARATH (167-428): 1.94e-33: 129: 21.29		SCL30_ARATH (136-583): 5.98e-152: 451: 24.79
+	At
		1187043 BH084_ARATH (149-336): 4.37e-33: 128: 24.87		SCL23_ARATH (189-581): 3.8e-135: 401: 30.71
+	At
		1210120 BEE1_ARATH (140-369): 4.79e-33: 126: 20.08		SCL23_ARATH (189-581): 3.8e-135: 401: 30.71
+	At
		1339911 BH079_ARATH (103-342): 3.77e-32: 125: 18.11		SCL7_ARATH (108-581): 1.09e-120: 369: 23.84