Interactor 1: RPOB (Q727C7)
DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
Gene: RPOB
Interactor 2: Q72B50 (Q72B50)
RNA polymerase sigma factor SigA
Gene: rpoD
Species: Nitratidesulfovibrio vulgaris str. Hildenborough
Source: intact
Category: High-throughput
Confidence: High
| Method score | Annotation score | Interaction score |
|---|---|---|
| 0.38 | 1.00 | 0.618 |
The method score is based on:
| Property | Details |
|---|---|
| Experiments | unassigned1256 |
| Identification Methods | tandem affinity purification |
| Interaction Type | physical association |
The annotation score is based on:
| Property | Details |
|---|---|
| Interacting Pfam domains | RNA_pol_Rpb2_1~Sigma70_r1_1, RNA_pol_Rpb2_1~Sigma70_r1_2, RNA_pol_Rpb2_1~Sigma70_r2, RNA_pol_Rpb2_1~Sigma70_r3, RNA_pol_Rpb2_3~Sigma70_r3, RNA_pol_Rpb2_6~Sigma70_r2, RNA_pol_Rpb2_6~Sigma70_r3, RNA_pol_Rpb2_6~Sigma70_r4, RNA_pol_Rpb2_7~Sigma70_r2, RNA_pol_Rpb2_7~Sigma70_r3 |
| Common GO terms | GO:0003677 - DNA binding |
| Homologous interactions | 12 |
Homologous interactions
Color coding for hit scores 
|
|
|||||||||||||
| + | Ec |   |
|
|||||||||||
| + | Hp | |
|
|||||||||||
| + | Ec | |
|
|||||||||||
| + | Ec | |
 |
|||||||||||
| + | Ec | |
|
|||||||||||
| + | Hp | |
|
|||||||||||
| + | Mp | |
|
|||||||||||
| + | Bs | |
|
|||||||||||
| + | Bs | |
|
|||||||||||
| + | Ss | |
|
|||||||||||
| + | Ss | |
|
|||||||||||
| + | Ss | |
|
|||||||||||
Service provided by Combinatics, Japan
Last updated: 11Aug2025
