HitPredict

Interactor 1: NCBP1 (Q9SIU2)
Nuclear cap-binding protein subunit 1 (80 kDa nuclear cap-binding protein) (AtCBP80) (NCBP 80 kDa subunit) (Abscisic acid-hypersensitive protein 1) (ABA-hypersensitive protein 1) (Protein ENSALADA)
Gene: ABH1

Interactor 2: NCBP2 (Q9XFD1)
Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (AtCBP20)
Gene: CBP20

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.64	1.00	0.800

The method score is based on:

Property	Details
Experiments	19453442, 19453450
Identification Methods	two hybrid, fluorescent resonance energy transfer, anti bait coimmunoprecipitation
Interaction Type	physical association, direct interaction

The annotation score is based on:

Property	Details
Interacting Pfam domains	MIF4G_like~RRM_1, MIF4G_like_2~RRM_1
Common GO terms	GO:0000339 - RNA cap binding GO:0000380 - alternative mRNA splicing, via spliceosome GO:0000394 - RNA splicing, via endonucleolytic cleavage and ligation GO:0000398 - mRNA splicing, via spliceosome GO:0000956 - nuclear-transcribed mRNA catabolic process and 8 others more... GO:0005634 - nucleus GO:0005846 - nuclear cap binding complex GO:0006406 - mRNA export from nucleus GO:0031053 - primary miRNA processing GO:0035195 - miRNA-mediated post-transcriptional gene silencing GO:0042789 - mRNA transcription by RNA polymerase II GO:0051607 - defense response to virus GO:1901527 - abscisic acid-activated signaling pathway involved in stomatal movement
Homologous interactions	9

Homologous interactions

Color coding for hit scores

	1	848
At

1	257

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024