HitPredict

Interactor 1: RPOBC (O25806)
Bifunctional DNA-directed RNA polymerase subunit beta-beta' (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase subunit beta (RNA polymerase subunit beta) (Transcriptase subunit beta); DNA-directed RNA polymerase subunit beta' (RNA polymerase subunit beta') (Transcriptase subunit beta')]
Gene: RPOBC

Interactor 2: RPOA (P56001)
DNA-directed RNA polymerase subunit alpha (RNAP subunit alpha) (EC 2.7.7.6) (RNA polymerase subunit alpha) (Transcriptase subunit alpha)
Gene: RPOA

Species: Helicobacter pylori 26695

Source: mint

Category: High-throughput

Confidence: High

Method score Annotation score Interaction score
0.34 1.00 0.590

The method score is based on:

Property Details
Experiments 11196647
Identification Methods two hybrid
Interaction Type physical association

The annotation score is based on:

Property Details
Interacting Pfam domains RNA_pol_A_CTD~RNA_pol_Rpb1_2, RNA_pol_L~RNA_pol_Rpb1_2, RNA_pol_L~RNA_pol_Rpb1_3, RNA_pol_L~RNA_pol_Rpb1_4, RNA_pol_L~RNA_pol_Rpb1_5, RNA_pol_A_CTD~RNA_pol_Rpb2_6, RNA_pol_L~RNA_pol_Rpb2_6
Common GO terms GO:0000428 - DNA-directed RNA polymerase complex
GO:0003677 - DNA binding
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity
GO:0006351 - DNA-templated transcription
Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

1 2890
Hp

1 344
+ Nv
+ Ec
+ Bt
+ Hs
+ Sp
+ Hs
+ Sc
+ Hs
+ Hs
+ Sc
+ Bs
+ Sc
+ Hs
+ Hs
+ Mp
+ Hv
+ Nv
+ Ec
+ Mp
+ Tt

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024