HitPredict

Interactor 1: SMD1 (O42661)
Small nuclear ribonucleoprotein Sm D1 (Sm-D1) (snRNP core protein D1)
Gene: SMD1

Interactor 2: CEF1 (P39964)
Pre-mRNA-splicing factor cdc5 (Cell division control protein 5)
Gene: cdc5

Species: Schizosaccharomyces pombe 972h-

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.64	0.60	0.624

Property	Details
Experiments	15755920, 24014766, 11884590
Identification Methods	affinity chromatography technology, biochemical, tandem affinity purification
Interaction Type	physical association, association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0005634 - nucleus GO:0005829 - cytosol GO:0045292 - mRNA cis splicing, via spliceosome GO:0071014 - post-mRNA release spliceosomal complex
Homologous interactions	9

Homologous interactions

Color coding for hit scores

	1 117 Sp			1 757
+	Sp
		815921 SMD3_SCHPO (2-110): 3.07e-31: 108: 23.85		CEF1_SCHPO (1-757): 0: 574: 100.00
+	Hs
		974455 SMD1_HUMAN (1-96): 9.05e-35: 117: 78.13		CDC5L_HUMAN (2-753): 3.81e-179: 534: 37.01
+	Hs
		1404532 LSM2_HUMAN (1-94): 7.13e-34: 114: 29.17		CDC5L_HUMAN (2-753): 3.81e-179: 534: 37.01
+	Hs
		974824 SMD3_HUMAN (2-107): 7.3e-32: 110: 23.59		CDC5L_HUMAN (2-753): 3.81e-179: 534: 37.01
+	Hs
		974025 RUXF_HUMAN (3-69): 1.73e-24: 90.4: 31.34		CDC5L_HUMAN (2-753): 3.81e-179: 534: 37.01
+	Sc
		847825 SMD3_YEAST (2-101): 3.63e-28: 100: 25.00		CEF1_YEAST (2-581): 4.27e-88: 290: 29.10
+	Sc
		1036171 SMD1_YEAST (1-114): 2.04e-25: 94.6: 39.86		CEF1_YEAST (2-581): 4.27e-88: 290: 29.10
+	Zm
		15018 A0A1D6MPT6_MAIZE (1-112): 6.4e-39: 130: 28.32		A0A1D6G8L0_MAIZE (3-381): 4.22e-64: 225: 16.36
+	At
		103349 LSM4_ARATH (1-92): 1.38e-35: 120: 27.96		MYB73_ARATH (6-160): 5.37e-44: 163: 24.05