HitPredict

Interactor 1: RPB5A (O81098)
DNA-directed RNA polymerases II and IV subunit 5A (RPB5a) (DNA-directed RNA polymerase II subunit E) (RNA polymerase I, II and III 24.3 kDa subunit) (AtRPB24.3)
Gene: NRPB5A

Interactor 2: NRPD1 (Q9LQ02)
DNA-directed RNA polymerase IV subunit 1 (DNA-directed RNA polymerase D subunit 1) (AtNRPD1a) (Nuclear RNA polymerase D 1a) (EC 2.7.7.6) (Protein RNA-DIRECTED DNA METHYLATION DEFECTIVE 3) (Protein SILENCING DEFECTIVE 4) (Protein SILENCING MOVEMENT DEFICIENT 2) (RNA polymerase IV subunit 1a) (POL IV 1a)
Gene: NRPD1

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.56 0.60 0.584

The method score is based on:

Property Details
Experiments 21811420, 19141635
Identification Methods affinity chromatography technology, anti tag coimmunoprecipitation
Interaction Type physical association

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0000418 - RNA polymerase IV complex
GO:0001055 - RNA polymerase II activity
GO:0003677 - DNA binding
GO:0005665 - RNA polymerase II, core complex
Homologous interactions 13

Homologous interactions

Color coding for hit scores

1 205
At

1 1453
+ At
+ At
+ At
+ Sp
+ Hs
+ Sc
+ Sc
+ Hs
+ Hv
+ Bt
+ Hs
+ At
+ Sc

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Last updated: 15 Jul 2024