Interactor 1: RPOB (P0A8V2)
DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
Gene: RPOB
Interactor 2: RPOS (P13445)
RNA polymerase sigma factor RpoS (Sigma S) (Sigma-38)
Gene: RPOS
Species: Escherichia coli K-12
Source: intact
Category: Small-scale
Confidence: High
| Method score | Annotation score | Interaction score |
|---|---|---|
| 0.61 | 1.00 | 0.783 |
The method score is based on:
The annotation score is based on:
| Property | Details |
|---|---|
| Interacting Pfam domains | RNA_pol_Rpb2_1~Sigma70_r1_2, RNA_pol_Rpb2_1~Sigma70_r2, RNA_pol_Rpb2_1~Sigma70_r3, RNA_pol_Rpb2_6~Sigma70_r2, RNA_pol_Rpb2_6~Sigma70_r3, RNA_pol_Rpb2_6~Sigma70_r4, RNA_pol_Rpb2_7~Sigma70_r2, RNA_pol_Rpb2_7~Sigma70_r3 |
| Common GO terms | GO:0000345 - cytosolic DNA-directed RNA polymerase complex GO:0003677 - DNA binding GO:0005737 - cytoplasm GO:0006352 - DNA-templated transcription initiation GO:2000142 - regulation of DNA-templated transcription initiation |
| Homologous interactions | 12 |
Homologous interactions
Color coding for hit scores 
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| + | Ec |   |
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| + | Nv | |
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| + | Ec | |
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| + | Ec | |
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| + | Hp | |
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| + | Hp | |
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| + | Mp | |
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| + | Bs | |
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| + | Ss | |
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| + | Ss | |
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| + | Ss | |
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| + | Bs | |
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Service provided by Combinatics, Japan
Last updated: 15 Jul 2024
