HitPredict

Interactor 1: MAD56 (P0C5B2)
MADS-box transcription factor 56 (FDRMADS8) (OsMADS56) (RMADS214)
Gene: MADS56

Interactor 2: MAD50 (Q9XJ60)
MADS-box transcription factor 50 (OsMADS50) (Protein AGAMOUS-like 20) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (RMADS208)
Gene: MADS50

Species: Oryza sativa Japonica Group

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.50	1.00	0.713

Property	Details
Experiments	19558411
Identification Methods	two hybrid, affinity chromatography technology
Interaction Type	direct interaction, physical association

Property	Details
Interacting Pfam domains	K-box~K-box, SRF-TF~SRF-TF
Common GO terms	GO:0000978 - RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634 - nucleus GO:0006357 - regulation of transcription by RNA polymerase II GO:0045944 - positive regulation of transcription by RNA polymerase II and 1 others more... GO:0046983 - protein dimerization activity
Homologous interactions	19

Homologous interactions

Color coding for hit scores

	1 233 Os			1 230
+	Os
		1150821 MADS6_ORYSJ (1-223): 1.57e-80: 243: 43.05		MAD17_ORYSJ (1-210): 1.38e-73: 225: 42.47
+	Os
		1001544 MADS6_ORYSJ (1-223): 1.57e-80: 243: 43.05		MADS7_ORYSJ (1-228): 7.96e-70: 215: 38.78
+	Os
		1150822 MADS6_ORYSJ (1-223): 1.57e-80: 243: 43.05		MADS8_ORYSJ (1-228): 5.75e-68: 211: 36.03
+	Gh
		1150828 Q6EUV7_GERHY (1-232): 8.95e-77: 233: 36.48		Q6EUV6_GERHY (1-227): 4.05e-72: 221: 39.33
+	Os
		472753 MAD56_ORYSJ (1-233): 4.84e-78: 236: 100.00		MADS7_ORYSJ (1-228): 7.96e-70: 215: 38.78
+	Os
		472755 MADS6_ORYSJ (1-223): 1.57e-80: 243: 43.05		MAD56_ORYSJ (1-222): 7.09e-67: 207: 61.64
+	Gh
		87912 Q6EUV7_GERHY (1-232): 8.95e-77: 233: 36.48		D2T2F9_GERHY (1-227): 4.55e-70: 216: 36.18
+	Os
		1014693 MADS6_ORYSJ (1-223): 1.57e-80: 243: 43.05		MADS1_ORYSJ (1-210): 1.53e-65: 205: 39.46
+	Gh
		1150834 Q6EUV7_GERHY (1-232): 8.95e-77: 233: 36.48		Q6EUV7_GERHY (1-227): 2.36e-68: 211: 34.87
+	Gh
		87900 Q6EUV7_GERHY (1-232): 8.95e-77: 233: 36.48		D2T2F8_GERHY (1-220): 2.74e-68: 211: 40.09
+	At
		186895 AGL6_ARATH (1-232): 1.36e-76: 233: 37.87		SEP3_ARATH (1-227): 7.43e-68: 210: 37.92
+	Os
		472752 MAD56_ORYSJ (1-233): 4.84e-78: 236: 100.00		MAD56_ORYSJ (1-222): 7.09e-67: 207: 61.64
+	Os
		1000291 MADS6_ORYSJ (1-223): 1.57e-80: 243: 43.05		MADS5_ORYSJ (1-211): 5.95e-63: 197: 39.63
+	At
		571271 Q1PEU3_ARATH (1-232): 1.36e-76: 233: 37.87		AG_ARATH (2-224): 2.95e-64: 201: 36.52
+	Gh
		1150840 Q6EUV7_GERHY (1-232): 8.95e-77: 233: 36.48		Q9ZS30_GERHY (1-216): 1.14e-63: 200: 36.77
+	Gh
		87922 Q6EUV7_GERHY (1-232): 8.95e-77: 233: 36.48		D2T2G0_GERHY (1-202): 4.95e-63: 198: 36.77
+	Gh
		87932 Q6EUV7_GERHY (1-232): 8.95e-77: 233: 36.48		D2T2G1_GERHY (1-209): 8.36e-63: 198: 37.44
+	Gh
		1150839 Q6EUV7_GERHY (1-232): 8.95e-77: 233: 36.48		Q9ZS29_GERHY (1-216): 1e-61: 194: 35.87
+	Os
		1000277 MADS6_ORYSJ (1-223): 1.57e-80: 243: 43.05		MAD18_ORYSJ (1-205): 1.6e-37: 132: 44.25