HitPredict

Interactor 1: PHYB (P14713)
Phytochrome B (Protein LONG HYPOCOTYL 3) (Protein OUT OF PHASE 1)
Gene: PHYB

Interactor 2: SPA1 (Q9SYX2)
Protein SUPPRESSOR OF PHYA-105 1 (EC 2.7.-.-)
Gene: SPA1

Species: Arabidopsis thaliana

Source: biogrid

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.80 0.60 0.694

The method score is based on:

Property Details
Experiments 25627066, 25744387, 26120968, 23371951
Identification Methods two hybrid, protein complementation assay, affinity chromatography technology
Interaction Type direct interaction, physical association

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0005634 - nucleus
GO:0009640 - photomorphogenesis
GO:0010218 - response to far red light
GO:0016604 - nuclear body
GO:0016607 - nuclear speck
and 1 others

more...
Homologous interactions 6

Homologous interactions

Color coding for hit scores

1 1172
At

1 1029
+ At
+ At
+ At
+ At
+ At
+ At

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024