HitPredict

Interactor 1: PRP40 (P33203)
Pre-mRNA-processing protein PRP40
Gene: PRP40

Interactor 2: SMD1 (Q02260)
Small nuclear ribonucleoprotein Sm D1 (Sm-D1) (snRNP core protein D1)
Gene: SMD1

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: High-throughput

Confidence: High

Method score Annotation score Interaction score
0.79 0.60 0.691

The method score is based on:

Property Details
Experiments 16429126, 34349264, 16554755, 37968396
Identification Methods affinity chromatography technology, tandem affinity purification
Interaction Type physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0000243 - commitment complex
GO:0000395 - mRNA 5'-splice site recognition
GO:0000398 - mRNA splicing, via spliceosome
GO:0003723 - RNA binding
GO:0005634 - nucleus
and 3 others

more...
Homologous interactions 1

Homologous interactions

Color coding for hit scores

1 583
Sc

1 146
+ Sc

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024