HitPredict

Interactor 1: LSM4 (P40070)
U6 snRNA-associated Sm-like protein LSm4 (Like-SM protein 4)
Gene: LSM4

Interactor 2: LSM4 (P40070)
U6 snRNA-associated Sm-like protein LSm4 (Like-SM protein 4)
Gene: LSM4

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.63 1.00 0.800

The method score is based on:

Property Details
Experiments 18467557, 19345193
Identification Methods protein complementation assay, pull down, dihydrofolate reductase reconstruction
Interaction Type direct interaction, physical association

The annotation score is based on:

Property Details
Interacting Pfam domains LSM~LSM
Common GO terms GO:0000290 - deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000387 - spliceosomal snRNP assembly
GO:0000398 - mRNA splicing, via spliceosome
GO:0000932 - P-body
GO:0005634 - nucleus
and 13 others

more...
Homologous interactions 4

Homologous interactions

Color coding for hit scores

1 187
Sc

1 187
+ Zm
+ Sc
+ Hs
+ Sp

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024