HitPredict

Interactor 1: NUP85 (P46673)
Nucleoporin NUP85 (Nuclear pore protein NUP85)
Gene: NUP85

Interactor 2: SEC13 (Q04491)
Protein transport protein SEC13
Gene: SEC13

Species: Saccharomyces cerevisiae S288C

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.94 1.00 0.970

The method score is based on:

Property Details
Experiments 8565072, 11805826, 19503077, 10747086, 15741174, 37968396, 18046405, 16429126, 19111661, 33333025
Identification Methods affinity chromatography technology, tandem affinity purification, biochemical
Interaction Type physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains Nucleopor_Nup85~WD40
Common GO terms GO:0005635 - nuclear envelope
GO:0005643 - nuclear pore
GO:0006606 - protein import into nucleus
GO:0006913 - nucleocytoplasmic transport
GO:0031080 - nuclear pore outer ring
and 2 others

more...
Homologous interactions 2

Homologous interactions

Color coding for hit scores

1 744
Sc

1 297
+ Sc
+ Sp

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024