HitPredict

Interactor 1: NU145 (P49687)
Nucleoporin NUP145 (EC 3.4.21.-) (Nuclear pore protein NUP145) [Cleaved into: Nucleoporin NUP145N (N-NUP145); Nucleoporin NUP145C (C-NUP145)]
Gene: NUP145

Interactor 2: NUP49 (Q02199)
Nucleoporin NUP49/NSP49 (Nuclear pore protein NUP49/NSP49)
Gene: NUP49

Species: Saccharomyces cerevisiae S288C

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.67 0.60 0.636

The method score is based on:

Property Details
Experiments 11387327, 12543930, 27194810
Identification Methods affinity chromatography technology, two hybrid array
Interaction Type physical association

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0000973 - post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003723 - RNA binding
GO:0005643 - nuclear pore
GO:0006405 - RNA export from nucleus
GO:0006409 - tRNA export from nucleus
and 8 others

more...
Homologous interactions 18

Homologous interactions

Color coding for hit scores

1 1317
Sc

1 472
+ Sc
+ Sc
+ Sc
+ Sc
+ Sc
+ Sc
+ Hs
+ Tt
+ Tt
+ Hs
+ Sc
+ Hs
+ Sc
+ Hs
+ Ce
+ Ce
+ Ce
+ Sc

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024