HitPredict

Interactor 1: CD48A (P54609)
Cell division control protein 48 homolog A (AtCDC48a)
Gene: CDC48A

Interactor 2: CD48A (P54609)
Cell division control protein 48 homolog A (AtCDC48a)
Gene: CDC48A

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.74 1.00 0.864

The method score is based on:

Property Details
Experiments 15592873, 17693538, 16621602
Identification Methods two hybrid, comigration in gel electrophoresis, fluorescent resonance energy transfer
Interaction Type direct interaction, physical association

The annotation score is based on:

Property Details
Interacting Pfam domains AAA~AAA, AAA~AAA_lid_3, AAA~CDC48_2, AAA~CDC48_N, AAA_lid_3~AAA_lid_3, AAA_lid_3~CDC48_2, AAA_lid_3~CDC48_N, CDC48_2~CDC48_2, CDC48_2~CDC48_N, CDC48_N~CDC48_N
Common GO terms GO:0005524 - ATP binding
GO:0005634 - nucleus
GO:0005635 - nuclear envelope
GO:0005730 - nucleolus
GO:0005737 - cytoplasm
and 20 others

more...
Homologous interactions 17

Homologous interactions

Color coding for hit scores

1 809
At

1 809
+ Dm
+ Rn
+ Hs
+ Mm
+ Sc
+ Ce
+ Ce
+ Ce
+ Hs
+ Hs
+ Hs
+ Sp
+ Hs
+ Sc
+ Hs
+ Sp
+ Sp

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Last updated: 15 Jul 2024