HitPredict

Interactor 1: YBOX1 (P67809)
Y-box-binding protein 1 (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (DNA-binding protein B) (DBPB) (Enhancer factor I subunit A) (EFI-A) (Nuclease-sensitive element-binding protein 1) (Y-box transcription factor)
Gene: YBX1

Interactor 2: DDX28 (Q9NUL7)
Probable ATP-dependent RNA helicase DDX28 (EC 3.6.4.13) (Mitochondrial DEAD box protein 28)
Gene: DDX28

Species: Homo sapiens

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.54	0.60	0.571

Property	Details
Experiments	23986595, 25497084
Identification Methods	anti tag coimmunoprecipitation, anti bait coimmunoprecipitation
Interaction Type	physical association, association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003723 - RNA binding GO:0005654 - nucleoplasm GO:0005829 - cytosol
Homologous interactions	18

Homologous interactions

Color coding for hit scores

	1 324 Hs			1 540
+	Hs
		931311 YBOX1_HUMAN (1-324): 4.21e-69: 220: 100.00		DDX17_HUMAN (59-535): 4.77e-132: 403: 24.90
+	Hs
		571395 YBOX1_HUMAN (1-324): 4.21e-69: 220: 100.00		DDX5_HUMAN (51-535): 8.85e-133: 401: 26.34
+	Hs
		78151 YBOX1_HUMAN (1-324): 4.21e-69: 220: 100.00		B5BUE6_HUMAN (51-535): 1.88e-132: 400: 26.34
+	Hs
		133971 YBOX1_HUMAN (1-324): 4.21e-69: 220: 100.00		DDX3X_HUMAN (4-536): 2.55e-126: 386: 20.84
+	Hs
		1346049 YBOX2_HUMAN (23-314): 7.22e-48: 166: 44.15		DDX28_HUMAN (1-540): 2.48e-135: 405: 100.00
+	Hs
		1334552 LN28A_HUMAN (50-217): 1.06e-42: 148: 23.46		DDX28_HUMAN (1-540): 2.48e-135: 405: 100.00
+	Hs
		1271664 LN28A_HUMAN (50-217): 1.06e-42: 148: 23.46		DDX17_HUMAN (59-535): 4.77e-132: 403: 24.90
+	Hs
		571600 LN28A_HUMAN (50-217): 1.06e-42: 148: 23.46		DDX5_HUMAN (51-535): 8.85e-133: 401: 26.34
+	Hs
		134211 LN28A_HUMAN (50-217): 1.06e-42: 148: 23.46		DDX3X_HUMAN (4-536): 2.55e-126: 386: 20.84
+	Ce
		248035 O62213_CAEEL (40-143): 9.08e-46: 156: 70.19		Q9XUW5_CAEEL (73-533): 6.12e-120: 366: 25.97
+	Ce
		106462 G5EDV3_CAEEL (47-190): 1.78e-33: 126: 41.51		Q9XUW5_CAEEL (73-533): 6.12e-120: 366: 25.97
+	Hs
		1328085 LN28A_HUMAN (50-217): 1.06e-42: 148: 23.46		DDX47_HUMAN (102-534): 3.12e-48: 175: 34.40
+	Ce
		248030 O62213_CAEEL (40-143): 9.08e-46: 156: 70.19		Q9N3F4_CAEEL (128-493): 1.92e-39: 154: 30.50
+	Ec
		465120 CSPC_ECOLI (57-127): 4.53e-35: 123: 43.66		DEAD_ECOLI (127-538): 6.11e-41: 158: 32.93
+	Ce
		106457 G5EDV3_CAEEL (47-190): 1.78e-33: 126: 41.51		Q9N3F4_CAEEL (128-493): 1.92e-39: 154: 30.50
+	Ec
		464324 CSPE_ECOLI (57-127): 2.34e-34: 122: 43.66		DEAD_ECOLI (127-538): 6.11e-41: 158: 32.93
+	Ec
		465119 CSPA_ECOLI (55-127): 1.2e-34: 122: 41.10		DEAD_ECOLI (127-538): 6.11e-41: 158: 32.93
+	Ec
		464297 CSPD_ECOLI (60-128): 3.41e-28: 106: 40.58		DEAD_ECOLI (127-538): 6.11e-41: 158: 32.93