HitPredict

Interactor 1: SMD1 (Q02260)
Small nuclear ribonucleoprotein Sm D1 (Sm-D1) (snRNP core protein D1)
Gene: SMD1

Interactor 2: PRP3 (Q03338)
U4/U6 small nuclear ribonucleoprotein PRP3 (Pre-mRNA-splicing factor 3)
Gene: PRP3

Species: Saccharomyces cerevisiae S288C

Source: intact

Category: High-throughput

Confidence: High

Method score Annotation score Interaction score
0.62 1.00 0.789

The method score is based on:

Property Details
Experiments 16429126, 37968396
Identification Methods affinity chromatography technology, tandem affinity purification
Interaction Type physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains DUF1115~LSM
Common GO terms GO:0000245 - spliceosomal complex assembly
GO:0000387 - spliceosomal snRNP assembly
GO:0000398 - mRNA splicing, via spliceosome
GO:0005634 - nucleus
GO:0005681 - spliceosomal complex
and 3 others

more...
Homologous interactions 1

Homologous interactions

Color coding for hit scores

1 146
Sc

1 469
+ Hs

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024