HitPredict

Interactor 1: RDM3 (F4JW79)
Protein RNA-directed DNA methylation 3 (KOW domain-containing transcription factor 1) (Protein SPT5-like)
Gene: RDM3

Interactor 2: AGO4 (Q9ZVD5)
Protein argonaute 4 (AtAGO4) (Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 11)
Gene: AGO4

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.72 0.60 0.657

The method score is based on:

Property Details
Experiments 19410546, 19343051
Identification Methods pull down, affinity chromatography technology, anti bait coimmunoprecipitation, anti tag coimmunoprecipitation
Interaction Type direct interaction, physical association

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0003682 - chromatin binding
GO:0005654 - nucleoplasm
GO:0030422 - siRNA processing
GO:0031507 - heterochromatin formation
GO:0080188 - gene silencing by siRNA-directed DNA methylation
Homologous interactions 18

Homologous interactions

Color coding for hit scores

1 1493
At

1 924
+ At
+ Hs
+ Hs
+ Hs
+ At
+ Hs
+ Mm
+ Mm
+ Mm
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Dr

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Last updated: 15 Jul 2024