Protein: RAE1
Protein RAE1 (RNA export factor 1)

Gene: RAE1
Organism: Arabidopsis thaliana
Interactions: 188
UniProt ID: Q38942

Gene Ontology (top 5):
GO:0005635 - nuclear envelope
GO:0005643 - nuclear pore
GO:0015031 - protein transport
GO:0051028 - mRNA transport
GO:0080008 - Cul4-RING E3 ubiquitin ligase complex

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

1182632

DDB1A
DNA damage-binding protein 1a

1

14

Small-scale

0.656

High

265063

SC13B
Protein transport protein SEC13 homolog B

1

20

High-throughput

0.618

High

1182537

RAE1
Protein RAE1

1

18

High-throughput

0.618

High

1182573

NUP85
Nuclear pore complex protein NUP85

1

2

High-throughput

0.618

High

1182578

SEH1
Protein SEH1

1

19

High-throughput

0.618

High

90538

CPNB3
Chaperonin 60 subunit beta 3, chloroplastic

1

20

High-throughput

0.553

High

146732

TCPE
T-complex protein 1 subunit epsilon

1

20

High-throughput

0.553

High

636516

CPNA1
Chaperonin 60 subunit alpha 1, chloroplastic

1

20

High-throughput

0.553

High

636526

CPNB1
Chaperonin 60 subunit beta 1, chloroplastic

1

20

High-throughput

0.553

High

705043

TCPA
T-complex protein 1 subunit alpha

1

20

High-throughput

0.553

High

709194

CH60A
Chaperonin CPN60, mitochondrial

1

20

High-throughput

0.553

High

920954

ACT11
Actin-11

1

8

High-throughput

0.553

High

1182548

CPNA2
Chaperonin 60 subunit alpha 2, chloroplastic

1

20

High-throughput

0.553

High

1182556

TCPG
T-complex protein 1 subunit gamma

1

20

High-throughput

0.553

High

1182564

TCPZB
T-complex protein 1 subunit zeta 2

1

20

High-throughput

0.553

High

1182565

RH3
DEAD-box ATP-dependent RNA helicase 3, chloroplastic

1

13

High-throughput

0.553

High

1182582

TCPB
T-complex protein 1 subunit beta

1

20

High-throughput

0.553

High

1182585

TCPQ
T-complex protein 1 subunit theta

1

20

High-throughput

0.553

High

1182592

CPNB4
Chaperonin 60 subunit beta 4, chloroplastic

1

20

High-throughput

0.553

High

1182616

CPNB2
Chaperonin 60 subunit beta 2, chloroplastic

1

20

High-throughput

0.553

High

1182626

TCPD
T-complex protein 1 subunit delta

1

20

High-throughput

0.553

High

1182634

TCPZA
T-complex protein 1 subunit zeta 1

1

20

High-throughput

0.553

High

1182638

Q9S7V6
DGCR14-like protein

1

2

High-throughput

0.553

High

62391

NUA
Nuclear-pore anchor

1

17

High-throughput

0.479

High

99739

NU155
Nuclear pore complex protein NUP155

1

3

High-throughput

0.479

High

100539

Y14
RNA-binding protein Y14

1

15

High-throughput

0.479

High

100707

NU98B
Nuclear pore complex protein NUP98B

1

20

High-throughput

0.479

High

100776

NU133
Nuclear pore complex protein NUP133

1

2

High-throughput

0.479

High

101550

NU93B
Nuclear pore complex protein NUP93B

1

4

High-throughput

0.479

High

103764

NU205
Nuclear pore complex protein NUP205

1

3

High-throughput

0.479

High

198599

NP93A
Nuclear pore complex protein NUP93A

1

4

High-throughput

0.479

High

930108

CD48A
Cell division control protein 48 homolog A

1

8

High-throughput

0.479

High

1082091

GLE1
mRNA export factor GLE1

1

8

High-throughput

0.479

High

1182558

AAAS
Aladin

1

18

High-throughput

0.479

High

1182560

NUP54
Nuclear pore complex protein NUP54

1

3

High-throughput

0.479

High

1182562

NU107
Nuclear pore complex protein NUP107

1

4

High-throughput

0.479

High

1182563

NUP62
Nuclear pore complex protein NUP62

1

20

High-throughput

0.479

High

1182570

NUP58
Nuclear pore complex protein NUP58

1

7

High-throughput

0.479

High

1182574

NU98A
Nuclear pore complex protein NUP98A

1

20

High-throughput

0.479

High

1182595

NU160
Nuclear pore complex protein NUP160

1

1

High-throughput

0.479

High

1182598

NUP1
Nuclear pore complex protein NUP1

1

20

High-throughput

0.479

High

1182641

CD48D
Cell division control protein 48 homolog D

1

8

High-throughput

0.479

High

1182647

HSP7F
Heat shock 70 kDa protein 6, chloroplastic

1

18

High-throughput

0.479

High

103899

GP210
Nuclear pore complex protein GP210

1

0

High-throughput

0.458

High

1182567

Q8LAF4
Nucleoporin protein Ndc1-Nup protein

1

0

High-throughput

0.458

High

1182599

NUP88
Nuclear pore complex protein NUP88

1

0

High-throughput

0.458

High

1182606

C3H16
Zinc finger CCCH domain-containing protein 16

1

0

High-throughput

0.458

High

81846

STU
Protein kinase STUNTED

1

1

High-throughput

0.437

High

102001

F4JC74
Crooked neck protein, putative / cell cycle protein

1

17

High-throughput

0.437

High

198712

PDI21
Protein disulfide-isomerase like 2-1

1

10

High-throughput

0.437

High

199587

RK6
Large ribosomal subunit protein uL6c

1

8

High-throughput

0.437

High

200498

RL151
Large ribosomal subunit protein eL15z

1

4

High-throughput

0.437

High

308271

MDHX1
Malate dehydrogenase 1, peroxisomal

1

4

High-throughput

0.437

High

308421

ERG
GTP-binding protein ERG

1

4

High-throughput

0.437

High

509998

CB1A
Chlorophyll a-b binding protein 2, chloroplastic

1

3

High-throughput

0.437

High

601528

RL31
Large ribosomal subunit protein uL3z

1

7

High-throughput

0.437

High

607860

EFTU
Elongation factor Tu, chloroplastic

1

9

High-throughput

0.437

High

653935

HS701
Heat shock 70 kDa protein 1

1

11

High-throughput

0.437

High

653960

HS702
Heat shock 70 kDa protein 2

1

11

High-throughput

0.437

High

682960

G3PA1
Glyceraldehyde-3-phosphate dehydrogenase GAPA1, chloroplastic

1

6

High-throughput

0.437

High

682965

G3PB
Glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic

1

6

High-throughput

0.437

High

713533

TBB5
Tubulin beta-5 chain

1

17

High-throughput

0.437

High

713556

TBB9
Tubulin beta-9 chain

1

17

High-throughput

0.437

High

724836

ADT1
ADP,ATP carrier protein 1, mitochondrial

1

7

High-throughput

0.437

High

760726

CP20C
Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic

1

4

High-throughput

0.437

High

760733

G6PI
Glucose-6-phosphate isomerase, cytosolic

1

1

High-throughput

0.437

High

790818

BGL38
Myrosinase 1

1

1

High-throughput

0.437

High

829623

ADT2
ADP,ATP carrier protein 2, mitochondrial

1

7

High-throughput

0.437

High

843070

RL182
Large ribosomal subunit protein eL18y

1

5

High-throughput

0.437

High

843076

RL111
Large ribosomal subunit protein uL5z

1

5

High-throughput

0.437

High

880415

RL91
Large ribosomal subunit protein uL6z/uL6y

1

8

High-throughput

0.437

High

886229

RL4B
Large ribosomal subunit protein uL4y

1

7

High-throughput

0.437

High

1013552

ATPBM
ATP synthase subunit beta-1, mitochondrial

1

8

High-throughput

0.437

High

1020690

MDHC1
Malate dehydrogenase 1, cytoplasmic

1

4

High-throughput

0.437

High

1081855

EF1A3
Elongation factor 1-alpha 3

1

5

High-throughput

0.437

High

1082263

FPP4
Filament-like plant protein 4

1

10

High-throughput

0.437

High

1082367

TBA4
Tubulin alpha-4 chain

1

16

High-throughput

0.437

High

1182538

Q39141
Chlorophyll a-b binding protein, chloroplastic

1

3

High-throughput

0.437

High

1182541

Q3E9D9
DNAJ heat shock N-terminal domain-containing protein

1

8

High-throughput

0.437

High

1182544

RL241
Large ribosomal subunit protein eL24z

1

4

High-throughput

0.437

High

1182551

Q6NPS1
At1g61690

1

3

High-throughput

0.437

High

1182553

Q84JH2
Nuclear transport factor 2

1

7

High-throughput

0.437

High

1182554

HOS1
E3 ubiquitin-protein ligase HOS1

1

2

High-throughput

0.437

High

1182555

AP1G1
AP-1 complex subunit gamma-1

1

5

High-throughput

0.437

High

1182568

R23A1
Large ribosomal subunit protein uL23z

1

5

High-throughput

0.437

High

1182569

TRXX
Thioredoxin X, chloroplastic

1

12

High-throughput

0.437

High

1182571

TKTC1
Transketolase-1, chloroplastic

1

3

High-throughput

0.437

High

1182572

Q8RWW9
DNA ligase

1

9

High-throughput

0.437

High

1182575

PSRP2
Small ribosomal subunit protein cS22

1

6

High-throughput

0.437

High

1182577

FNRL2
Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic

1

1

High-throughput

0.437

High

1182579

RL101
Large ribosomal subunit protein uL16z

1

4

High-throughput

0.437

High

1182583

ALFP2
Fructose-bisphosphate aldolase 2, chloroplastic

1

1

High-throughput

0.437

High

1182587

BAS1A
2-Cys peroxiredoxin BAS1, chloroplastic

1

5

High-throughput

0.437

High

1182589

MIC60
MICOS complex subunit MIC60, mitochondrial

1

1

High-throughput

0.437

High

1182590

BGL37
Myrosinase 2

1

1

High-throughput

0.437

High

1182591

IRE1A
Serine/threonine-protein kinase/endoribonuclease IRE1a

1

1

High-throughput

0.437

High

1182594

HSP7N
Heat shock 70 kDa protein 18

1

11

High-throughput

0.437

High

1182596

CAR2
Protein C2-DOMAIN ABA-RELATED 2

1

5

High-throughput

0.437

High

1182597

HPR1
Glycerate dehydrogenase HPR, peroxisomal

1

6

High-throughput

0.437

High

1182600

Q9FGM6
NAD(P)-binding Rossmann-fold superfamily protein

1

2

High-throughput

0.437

High

1182601

RPS4B
Disease resistance protein RPS4B

1

1

High-throughput

0.437

High

1182604

FNRL1
Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic

1

1

High-throughput

0.437

High

1182605

NUCL1
Nucleolin 1

1

18

High-throughput

0.437

High

1182607

G3PC2
Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic

1

5

High-throughput

0.437

High

1182609

FDL1
F-box/FBD/LRR-repeat protein At1g13570

1

1

High-throughput

0.437

High

1182610

RL61
Large ribosomal subunit protein eL6z

1

4

High-throughput

0.437

High

1182613

SMC5
Structural maintenance of chromosomes protein 5

1

8

High-throughput

0.437

High

1182614

HS704
Heat shock 70 kDa protein 4

1

11

High-throughput

0.437

High

1182617

BIP1
Heat shock 70 kDa protein BIP1

1

12

High-throughput

0.437

High

1182620

G3PA2
Glyceraldehyde-3-phosphate dehydrogenase GAPA2, chloroplastic

1

6

High-throughput

0.437

High

1182622

GLO2
Glycolate oxidase 2

1

1

High-throughput

0.437

High

1182628

FBL62
Putative F-box/LRR-repeat protein At3g59170

1

1

High-throughput

0.437

High

1182630

Q9LZ61
AGAMOUS-like 99

1

1

High-throughput

0.437

High

1182631

ATL14
RING-H2 finger protein ATL14

1

2

High-throughput

0.437

High

1182633

SYPC
Proline--tRNA ligase, cytoplasmic

1

4

High-throughput

0.437

High

1182635

Q9M9X2
F18C1.6 protein

1

20

High-throughput

0.437

High

1182636

NOP5B
Probable nucleolar protein 5-2

1

11

High-throughput

0.437

High

1182643

RK3A
Large ribosomal subunit protein uL3c

1

8

High-throughput

0.437

High

1182644

RLA22
Large ribosomal subunit protein P2y

1

4

High-throughput

0.437

High

1182646

RL191
Large ribosomal subunit protein eL19x

1

3

High-throughput

0.437

High

1182648

LHCA3
Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic

1

3

High-throughput

0.437

High

1182651

CB5
Chlorophyll a-b binding protein CP26, chloroplastic

1

3

High-throughput

0.437

High

100038

F4I1X2
25S rRNA

1

0

High-throughput

0.249

Low

100394

F4I5R5
Holliday junction resolvase

1

0

High-throughput

0.249

Low

101785

TPLAT
Protein TPLATE

1

0

High-throughput

0.249

Low

102676

F4JP86
tRNA/rRNA methyltransferase

1

0

High-throughput

0.249

Low

103402

F4K5Q9
Uncharacterized protein

1

0

High-throughput

0.249

Low

103948

F4KIN5
Uncharacterized protein

1

0

High-throughput

0.249

Low

199118

O22764
non-specific serine/threonine protein kinase

1

0

High-throughput

0.249

Low

200329

C97B3
Cytochrome P450 97B3, chloroplastic

1

0

High-throughput

0.249

Low

235597

PSBP2
Putative oxygen-evolving enhancer protein 2-2

1

0

High-throughput

0.249

Low

265082

O64767
AICARFT/IMPCHase bienzyme family protein

1

0

High-throughput

0.249

Low

265109

DRL18
Probable disease resistance protein At1g61310

1

0

High-throughput

0.249

Low

266190

RS16A
Small ribosomal subunit protein bS16cy

1

0

High-throughput

0.249

Low

306519

AGL23
Agamous-like MADS-box protein AGL23

1

0

High-throughput

0.249

Low

307808

IF32
Translation initiation factor IF3-2, chloroplastic

1

0

High-throughput

0.249

Low

532260

RBS1B
Ribulose bisphosphate carboxylase small subunit 1B, chloroplastic

1

0

High-throughput

0.249

Low

680225

KPPR
Phosphoribulokinase, chloroplastic

1

0

High-throughput

0.249

Low

683034

RK9
Large ribosomal subunit protein bL9c

1

0

High-throughput

0.249

Low

690450

BCA1
Beta carbonic anhydrase 1, chloroplastic

1

0

High-throughput

0.249

Low

873674

TPIS
Triosephosphate isomerase, cytosolic

1

0

High-throughput

0.249

Low

1020696

Y1439
BTB/POZ domain-containing protein At1g04390

1

0

High-throughput

0.249

Low

1082513

Y3330
Putative metallophosphoesterase At3g03305

1

0

High-throughput

0.249

Low

1082524

STR11
Rhodanese-like domain-containing protein 11, chloroplastic

1

0

High-throughput

0.249

Low

1182539

Q3E6P1
Transmembrane protein

1

0

High-throughput

0.249

Low

1182540

Q3E7Q8
Cytochrome P450 superfamily protein

1

0

High-throughput

0.249

Low

1182542

PSBQ2
Oxygen-evolving enhancer protein 3-2, chloroplastic

1

0

High-throughput

0.249

Low

1182543

Q42139
AT4g32260/F10M6_100

1

0

High-throughput

0.249

Low

1182545

CATA3
Catalase-3

1

0

High-throughput

0.249

Low

1182546

NLTP1
Non-specific lipid-transfer protein 1

1

0

High-throughput

0.249

Low

1182547

GLNA2
Glutamine synthetase, chloroplastic/mitochondrial

1

0

High-throughput

0.249

Low

1182549

Q5BPS4
Uncharacterized protein

1

0

High-throughput

0.249

Low

1182550

Y2048
WEB family protein At2g40480

1

0

High-throughput

0.249

Low

1182552

Q7Y1Z8
Malonyl-CoA decarboxylase family protein

1

0

High-throughput

0.249

Low

1182557

Q8GW37
At5g24230

1

0

High-throughput

0.249

Low

1182559

Q8GYE4
Myb-like HTH transcriptional regulator family protein

1

0

High-throughput

0.249

Low

1182561

GSTUM
Glutathione S-transferase U22

1

0

High-throughput

0.249

Low

1182566

CSPL7
CASP-like protein 2B2

1

0

High-throughput

0.249

Low

1182576

RK35
Large ribosomal subunit protein bL35c

1

0

High-throughput

0.249

Low

1182580

EXEC1
Protein EXECUTER 1, chloroplastic

1

0

High-throughput

0.249

Low

1182581

Q93ZD1
AT5g01260/F7J8_240

1

0

High-throughput

0.249

Low

1182584

RFAC3
Protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic

1

0

High-throughput

0.249

Low

1182586

PCAP1
Plasma membrane-associated cation-binding protein 1

1

0

High-throughput

0.249

Low

1182588

Y5838
Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380

1

0

High-throughput

0.249

Low

1182593

Q9C7M2
Zinc finger

1

0

High-throughput

0.249

Low

1182602

Q9FKI9
Emb|CAB86085.1

1

0

High-throughput

0.249

Low

1182603

ZHD1
Zinc-finger homeodomain protein 1

1

0

High-throughput

0.249

Low

1182608

FUT12
Putative fucosyltransferase-like protein

1

0

High-throughput

0.249

Low

1182611

PGKH1
Phosphoglycerate kinase 1, chloroplastic

1

0

High-throughput

0.249

Low

1182612

GEX3
Protein GAMETE EXPRESSED 3

1

0

High-throughput

0.249

Low

1182615

PP227
Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial

1

0

High-throughput

0.249

Low

1182618

LECT4
Lectin-like protein At1g53080

1

0

High-throughput

0.249

Low

1182619

Q9LPC2
At1g01990

1

0

High-throughput

0.249

Low

1182621

EXP18
Expansin-A18

1

0

High-throughput

0.249

Low

1182623

YCED1
Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic

1

0

High-throughput

0.249

Low

1182624

Q9LT39
Leucine-rich repeat

1

0

High-throughput

0.249

Low

1182625

Q9LU25
DNA-directed RNA polymerase subunit beta

1

0

High-throughput

0.249

Low

1182627

INO3
Probable inositol 3-phosphate synthase isozyme 3

1

0

High-throughput

0.249

Low

1182629

BQMT
2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic

1

0

High-throughput

0.249

Low

1182637

MUB1
Membrane-anchored ubiquitin-fold protein 1

1

0

High-throughput

0.249

Low

1182639

CP41B
Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic

1

0

High-throughput

0.249

Low

1182640

PSAD2
Photosystem I reaction center subunit II-2, chloroplastic

1

0

High-throughput

0.249

Low

1182642

CALS9
Callose synthase 9

1

0

High-throughput

0.249

Low

1182645

RGA
DELLA protein RGA

1

0

High-throughput

0.249

Low

1182649

MSL6
Mechanosensitive ion channel protein 6

1

0

High-throughput

0.249

Low

1182650

GLYM1
Serine hydroxymethyltransferase 1, mitochondrial

1

0

High-throughput

0.249

Low

1182652

Q9ZUD8
F5O8.12 protein

1

0

High-throughput

0.249

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025