Protein: VPS50
Syndetin (Coiled-coil domain-containing protein 132) (EARP/GARPII complex subunit VPS50)

Gene: VPS50
Organism: Homo sapiens
Interactions: 113
UniProt ID: Q96JG6

Gene Ontology (top 5):
GO:0000149 - SNARE binding
GO:0015031 - protein transport
GO:0016020 - membrane
GO:0032456 - endocytic recycling
GO:0048471 - perinuclear region of cytoplasm

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

1137638

VPS53
Vacuolar protein sorting-associated protein 53 homolog

7

6

Small-scale

0.751

High

1295160

VPS51
Vacuolar protein sorting-associated protein 51 homolog

7

3

Small-scale

0.750

High

1230698

VPS52
Vacuolar protein sorting-associated protein 52 homolog

6

6

Small-scale

0.738

High

1121543

EIPR1
EARP and GARP complex-interacting protein 1

6

2

Small-scale

0.733

High

726362

BASI
Basigin

3

2

High-throughput

0.667

High

1295158

VPS54
Vacuolar protein sorting-associated protein 54

3

1

High-throughput

0.667

High

320386

SNP29
Synaptosomal-associated protein 29

3

0

High-throughput

0.638

High

626575

FPR2
N-formyl peptide receptor 2

2

3

High-throughput

0.628

High

771230

CD79B
B-cell antigen receptor complex-associated protein beta chain

2

0

High-throughput

0.602

High

1295154

S39A9
Zinc transporter ZIP9

2

0

High-throughput

0.602

High

1295155

EXOC1
Exocyst complex component 1

2

0

High-throughput

0.602

High

212972

STX6
Syntaxin-6

2

2

Small-scale

0.594

High

172180

GP182
G-protein coupled receptor 182

1

3

High-throughput

0.536

High

1295141

CML1
Chemerin-like receptor 1

1

3

High-throughput

0.536

High

129415

GOLI4
Golgi integral membrane protein 4

1

0

High-throughput

0.513

High

280905

KRT37
Keratin, type I cuticular Ha7

1

0

High-throughput

0.513

High

631081

LAMA1
Laminin subunit alpha-1

1

0

High-throughput

0.513

High

666459

RABP2
Cellular retinoic acid-binding protein 2

1

0

High-throughput

0.513

High

729158

K22E
Keratin, type II cytoskeletal 2 epidermal

1

0

High-throughput

0.513

High

985375

VMAT2
Synaptic vesicular amine transporter

1

0

High-throughput

0.513

High

1052461

FLOT2
Flotillin-2

1

0

High-throughput

0.513

High

1232059

LRC25
Leucine-rich repeat-containing protein 25

1

0

High-throughput

0.513

High

1295142

CAB45
45 kDa calcium-binding protein

1

0

High-throughput

0.513

High

1295143

TRAIP
E3 ubiquitin-protein ligase TRAIP

1

0

High-throughput

0.513

High

1295153

GTR9
Solute carrier family 2, facilitated glucose transporter member 9

1

0

High-throughput

0.513

High

1295157

TMEM9
Proton-transporting V-type ATPase complex assembly regulator TMEM9

1

0

High-throughput

0.513

High

1295165

RPGF2
Rap guanine nucleotide exchange factor 2

1

0

High-throughput

0.513

High

152172

STX16
Syntaxin-16

1

3

Small-scale

0.500

High

261706

VAMP4
Vesicle-associated membrane protein 4

1

2

Small-scale

0.500

High

1079401

VAMP3
Vesicle-associated membrane protein 3

1

2

Small-scale

0.500

High

1205357

STX12
Syntaxin-12

1

3

Small-scale

0.500

High

1284292

VTI1A
Vesicle transport through interaction with t-SNAREs homolog 1A

1

1

Small-scale

0.500

High

1264420

CTBL1
Beta-catenin-like protein 1

1

0

High-throughput

0.493

High

723379

APJ
Apelin receptor

1

2

High-throughput

0.489

High

856448

EFNA4
Ephrin-A4

1

1

High-throughput

0.489

High

1031050

GPR17
Uracil nucleotide/cysteinyl leukotriene receptor

1

1

High-throughput

0.489

High

1273553

TF3B
Transcription factor IIIB 90 kDa subunit

1

1

High-throughput

0.489

High

1295164

PSF2
DNA replication complex GINS protein PSF2

1

1

High-throughput

0.489

High

1295166

NPTN
Neuroplastin

1

1

High-throughput

0.489

High

476208

UBC
Polyubiquitin-C [Cleaved into: Ubiquitin]

1

0

High-throughput

0.480

High

178728

STX7
Syntaxin-7

1

3

High-throughput

0.479

High

527713

LAMP2
Lysosome-associated membrane glycoprotein 2

1

1

High-throughput

0.479

High

591977

RAB4A
Ras-related protein Rab-4A

1

4

High-throughput

0.479

High

845670

RAB9A
Ras-related protein Rab-9A

1

2

High-throughput

0.479

High

914283

RB11A
Ras-related protein Rab-11A

1

1

High-throughput

0.479

High

1146736

A16L1
Autophagy-related protein 16-1

1

1

High-throughput

0.479

High

1152038

LTOR1
Ragulator complex protein LAMTOR1

1

1

High-throughput

0.479

High

1188352

ATG9A
Autophagy-related protein 9A

1

1

High-throughput

0.479

High

1295163

DD19B
ATP-dependent RNA helicase DDX19B

1

1

High-throughput

0.479

High

364407

TFR1
Transferrin receptor protein 1

1

0

High-throughput

0.458

High

742469

SYUA
Alpha-synuclein

1

0

High-throughput

0.458

High

875227

TERA
Transitional endoplasmic reticulum ATPase

1

0

High-throughput

0.458

High

1039289

DCTN2
Dynactin subunit 2

1

0

High-throughput

0.458

High

1122604

CCD93
Coiled-coil domain-containing protein 93

1

0

High-throughput

0.458

High

1160270

PKN3
Serine/threonine-protein kinase N3

1

0

High-throughput

0.458

High

1252286

GOGA5
Golgin subfamily A member 5

1

0

High-throughput

0.458

High

1264876

RFFL
E3 ubiquitin-protein ligase rififylin

1

0

Small-scale

0.458

High

1295144

NUF2
Kinetochore protein Nuf2

1

0

High-throughput

0.458

High

1295145

AMRA1
Activating molecule in BECN1-regulated autophagy protein 1

1

0

High-throughput

0.458

High

1295161

RABX5
Rab5 GDP/GTP exchange factor

1

0

High-throughput

0.458

High

68307

P20L1
PHD finger protein 20-like protein 1

1

1

High-throughput

0.437

High

126162

BMAL1
Basic helix-loop-helix ARNT-like protein 1

1

1

High-throughput

0.437

High

181554

CLOCK
Circadian locomoter output cycles protein kaput

1

1

High-throughput

0.437

High

385353

NTRK1
High affinity nerve growth factor receptor

1

1

High-throughput

0.437

High

1034373

SF3B2
Splicing factor 3B subunit 2

1

1

High-throughput

0.437

High

1285322

PF21A
PHD finger protein 21A

1

1

High-throughput

0.437

High

101789

F8W9L8
PHD finger protein 20-like protein 1

1

1

High-throughput

0.407

High

108869

H0YEX5
Splicing factor 3b subunit 2

1

1

High-throughput

0.407

High

110652

H3BQK0
RNA helicase

1

1

High-throughput

0.407

High

1290386

DTBP1
Dysbindin

3

0

High-throughput

0.347

High

174426

FANCG
Fanconi anemia group G protein

1

0

High-throughput

0.279

Low

201538

DHH
Desert hedgehog protein

1

0

High-throughput

0.279

Low

988827

ZN33A
Zinc finger protein 33A

1

0

High-throughput

0.279

Low

1065015

R3HD1
R3H domain-containing protein 1

1

0

High-throughput

0.279

Low

1102625

INSY1
Inhibitory synaptic factor 1

1

0

High-throughput

0.279

Low

1218906

HSC20
Iron-sulfur cluster co-chaperone protein HscB

1

0

High-throughput

0.279

Low

1295140

OPALI
Opalin

1

0

High-throughput

0.279

Low

1295146

S22A4
Solute carrier family 22 member 4

1

0

High-throughput

0.279

Low

1295147

PPIL3
Peptidyl-prolyl cis-trans isomerase-like 3

1

0

High-throughput

0.279

Low

81752

RBG10
Rab GTPase-activating protein 1-like, isoform 10

1

0

High-throughput

0.249

Low

122224

PSMD9
26S proteasome non-ATPase regulatory subunit 9

1

0

High-throughput

0.249

Low

164450

TRI66
Tripartite motif-containing protein 66

1

0

High-throughput

0.249

Low

204411

MS18B
Protein Mis18-beta

1

0

High-throughput

0.249

Low

232426

KDM1A
Lysine-specific histone demethylase 1A

1

0

High-throughput

0.249

Low

317498

YETS4
YEATS domain-containing protein 4

1

0

High-throughput

0.249

Low

319303

BRD1
Bromodomain-containing protein 1

1

0

High-throughput

0.249

Low

471643

TFPT
TCF3 fusion partner

1

0

High-throughput

0.249

Low

721168

RFA3
Replication protein A 14 kDa subunit

1

0

High-throughput

0.249

Low

898174

MAX
Protein max

1

0

High-throughput

0.249

Low

1050142

GIT2
ARF GTPase-activating protein GIT2

1

0

High-throughput

0.249

Low

1081126

CCDC6
Coiled-coil domain-containing protein 6

1

0

High-throughput

0.249

Low

1118336

GRAP1
GRIP1-associated protein 1

1

0

High-throughput

0.249

Low

1155869

PHLB3
Pleckstrin homology-like domain family B member 3

1

0

High-throughput

0.249

Low

1157593

CAVN1
Caveolae-associated protein 1

1

0

High-throughput

0.249

Low

1159414

FBX42
F-box only protein 42

1

0

High-throughput

0.249

Low

1171259

TRI67
Tripartite motif-containing protein 67

1

0

High-throughput

0.249

Low

1190391

HAUS6
HAUS augmin-like complex subunit 6

1

0

High-throughput

0.249

Low

1205114

DZIP3
E3 ubiquitin-protein ligase DZIP3

1

0

High-throughput

0.249

Low

1243887

FBX22
F-box only protein 22

1

0

High-throughput

0.249

Low

1254481

CCHCR
Coiled-coil alpha-helical rod protein 1

1

0

High-throughput

0.249

Low

1282104

P2R3C
Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma

1

0

High-throughput

0.249

Low

1289749

THA11
THAP domain-containing protein 11

1

0

High-throughput

0.249

Low

1295138

SCLT1
Sodium channel and clathrin linker 1

1

0

High-throughput

0.249

Low

1295139

RPR1A
Regulation of nuclear pre-mRNA domain-containing protein 1A

1

0

High-throughput

0.249

Low

1295148

PKHA4
Pleckstrin homology domain-containing family A member 4

1

0

High-throughput

0.249

Low

1295150

NCK5L
Nck-associated protein 5-like

1

0

High-throughput

0.249

Low

1295151

TUFT1
Tuftelin

1

0

High-throughput

0.249

Low

1295152

HM20A
High mobility group protein 20A

1

0

High-throughput

0.249

Low

1295156

TLS1
Splicing factor C9orf78

1

0

High-throughput

0.249

Low

1295159

ZRAN1
Ubiquitin thioesterase ZRANB1

1

0

High-throughput

0.249

Low

1295162

RCOR1
REST corepressor 1

1

0

High-throughput

0.249

Low

1091159

WHAL1
Putative WASP homolog-associated protein with actin, membranes and microtubules-like protein 1

1

0

High-throughput

0.232

Low

1295149

NRDE2
Nuclear exosome regulator NRDE2

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024