Protein: PCF11
Protein PCF11 (protein 1 of CF I)

Gene: PCF11
Organism: Saccharomyces cerevisiae S288C
Interactions: 101
UniProt ID: P39081

Gene Ontology (top 5):
GO:0000993 - RNA polymerase II complex binding
GO:0003729 - mRNA binding
GO:0005634 - nucleus
GO:0005737 - cytoplasm
GO:0005829 - cytosol

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

761159

CLP1
mRNA cleavage and polyadenylation factor CLP1

19

4

Small-scale

0.989

High

628789

RNA15
mRNA 3'-end-processing protein RNA15

20

3

Small-scale

0.766

High

628757

RNA14
mRNA 3'-end-processing protein RNA14

14

4

Small-scale

0.763

High

375396

RPB1
DNA-directed RNA polymerase II subunit RPB1

7

5

Small-scale

0.738

High

761150

YSH1
Endoribonuclease YSH1

5

3

Small-scale

0.712

High

761162

CFT2
Cleavage factor two protein 2

5

3

Small-scale

0.712

High

761165

YRA1
RNA annealing protein YRA1

3

3

Small-scale

0.674

High

761140

PTA1
Pre-tRNA-processing protein PTA1

3

2

Small-scale

0.655

High

667519

PAP
Poly(A) polymerase

3

0

Small-scale

0.634

High

440035

RPB2
DNA-directed RNA polymerase II subunit RPB2

2

3

Small-scale

0.629

High

761117

PCF11
Protein PCF11

1

4

Small-scale

0.621

High

761129

LSM8
U6 snRNA-associated Sm-like protein LSm8

2

1

High-throughput

0.603

High

728137

MPE1
Protein MPE1

2

0

High-throughput

0.595

High

550038

CSK21
Casein kinase II subunit alpha

2

1

High-throughput

0.588

High

761154

CFT1
Protein CFT1

2

2

Small-scale

0.584

High

376790

PABP
Polyadenylate-binding protein, cytoplasmic and nuclear

2

1

Small-scale

0.571

High

761142

ADA2
Transcriptional adapter 2

2

0

High-throughput

0.565

High

761152

SP382
Pre-mRNA-splicing factor SPP382

2

0

High-throughput

0.565

High

368070

EF1A
Elongation factor 1-alpha

2

0

High-throughput

0.559

High

662246

TF2B
Transcription initiation factor IIB

2

0

Small-scale

0.559

High

752363

IMDH2
Inosine-5'-monophosphate dehydrogenase 2

1

1

High-throughput

0.536

High

761132

IMDH3
Inosine-5'-monophosphate dehydrogenase 3

1

1

High-throughput

0.536

High

645210

RL16B
Large ribosomal subunit protein uL13B

1

0

High-throughput

0.513

High

588084

HSP60
Heat shock protein 60, mitochondrial

1

1

High-throughput

0.500

High

761151

ATG17
Autophagy-related protein 17

1

0

High-throughput

0.486

High

761127

SERB
Phosphoserine phosphatase

1

0

Small-scale

0.480

High

664826

BMH1
Protein BMH1

1

0

High-throughput

0.479

High

558060

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

4

High-throughput

0.479

High

761136

SSU72
RNA polymerase II subunit A C-terminal domain phosphatase SSU72

1

1

Small-scale

0.479

High

761155

SUB2
ATP-dependent RNA helicase SUB2

1

2

Small-scale

0.479

High

481510

RS11B
Small ribosomal subunit protein uS17B

1

0

High-throughput

0.458

High

507676

SYLM
Leucine--tRNA ligase, mitochondrial

1

0

High-throughput

0.458

High

637131

CYPC
Peptidyl-prolyl cis-trans isomerase C, mitochondrial

1

0

High-throughput

0.458

High

688248

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

0

High-throughput

0.458

High

710170

NCBP1
Nuclear cap-binding protein complex subunit 1

1

0

Small-scale

0.458

High

761130

JHD2
Histone demethylase JHD2

1

0

Small-scale

0.458

High

761164

SCC1
Sister chromatid cohesion protein 1

1

0

High-throughput

0.458

High

761166

RIO1
Serine/threonine-protein kinase RIO1

1

0

High-throughput

0.458

High

419338

HAP2
Transcriptional activator HAP2

1

2

High-throughput

0.457

High

704926

PACC
pH-response transcription factor pacC/RIM101

1

1

High-throughput

0.457

High

761119

IF2P
Eukaryotic translation initiation factor 5B

1

1

High-throughput

0.457

High

761128

FIP1
Pre-mRNA polyadenylation factor FIP1

1

1

High-throughput

0.457

High

761153

MLC2
Myosin light chain 2

1

1

High-throughput

0.457

High

761170

NOP56
Nucleolar protein 56

1

2

High-throughput

0.457

High

511341

SSB1
Ribosome-associated molecular chaperone SSB1

1

1

High-throughput

0.445

High

761125

SSB2
Ribosome-associated molecular chaperone SSB2

1

1

High-throughput

0.445

High

761131

RL4B
Large ribosomal subunit protein uL4B

1

1

High-throughput

0.445

High

423720

IPMK
Inositol polyphosphate multikinase

1

0

High-throughput

0.438

High

500653

AK
Aspartokinase

1

0

High-throughput

0.438

High

627618

NAP1
Nucleosome assembly protein

1

0

High-throughput

0.438

High

635860

PAT1
Deadenylation-dependent mRNA-decapping factor PAT1

1

0

High-throughput

0.438

High

643178

PPZ1
Serine/threonine-protein phosphatase PP-Z1

1

0

High-throughput

0.438

High

699408

RAD54
DNA repair and recombination protein RAD54

1

0

High-throughput

0.438

High

706000

NIP80
Protein NIP100

1

0

High-throughput

0.438

High

707231

NPL4
Nuclear protein localization protein 4

1

0

High-throughput

0.438

High

731244

YPT53
GTP-binding protein YPT53

1

0

High-throughput

0.438

High

761120

SAP1
Protein SAP1

1

0

High-throughput

0.438

High

761121

ARB1
ABC transporter ATP-binding protein ARB1

1

0

High-throughput

0.438

High

761124

LSM5
U6 snRNA-associated Sm-like protein LSm5

1

0

High-throughput

0.438

High

761126

SEC9
Protein transport protein SEC9

1

0

High-throughput

0.438

High

761133

ART5
Arrestin-related trafficking adapter 5

1

0

High-throughput

0.438

High

761135

ZPR1
Zinc finger chaperone ZPR1

1

0

High-throughput

0.438

High

761138

CNM67
Chaotic nuclear migration protein 67

1

0

High-throughput

0.438

High

761141

MEH1
Protein MEH1

1

0

High-throughput

0.438

High

761144

YD132
Uncharacterized protein YDR132C

1

0

High-throughput

0.438

High

761148

SFH1
Chromatin structure-remodeling complex subunit SFH1

1

0

High-throughput

0.438

High

761156

SHS1
Seventh homolog of septin 1

1

0

High-throughput

0.438

High

761157

NBA1
Protein NBA1

1

0

High-throughput

0.438

High

761160

SNX3
Sorting nexin-3

1

0

High-throughput

0.438

High

761161

HFI1
Transcriptional coactivator HFI1/ADA1

1

0

High-throughput

0.438

High

761163

NSL1
Kinetochore-associated protein NSL1

1

0

High-throughput

0.438

High

761167

TIP41
Type 2A phosphatase activator TIP41

1

0

High-throughput

0.438

High

761168

WTM2
Transcriptional modulator WTM2

1

0

High-throughput

0.438

High

761171

NKP1
Inner kinetochore subunit NKP1

1

0

High-throughput

0.438

High

141337

RS9A
Small ribosomal subunit protein uS4A

1

0

High-throughput

0.426

High

405191

RL17A
Large ribosomal subunit protein uL22A

1

0

High-throughput

0.426

High

478200

HSP77
Import motor subunit, mitochondrial

1

0

High-throughput

0.426

High

493988

HSP72
Heat shock protein SSA2

1

0

High-throughput

0.426

High

667181

RL8B
Large ribosomal subunit protein eL8B

1

0

High-throughput

0.426

High

761139

NAF1
H/ACA ribonucleoprotein complex non-core subunit NAF1

1

0

High-throughput

0.426

High

561121

CDC23
Anaphase-promoting complex subunit CDC23

1

1

High-throughput

0.417

High

761123

SHO1
High osmolarity signaling protein SHO1

2

0

High-throughput

0.314

High

761172

ATG11
Autophagy-related protein 11

2

0

High-throughput

0.307

High

761143

PML39
Pre-mRNA leakage protein 39

1

0

High-throughput

0.249

Low

141908

YP076
Putative uncharacterized protein YPR076W

1

0

High-throughput

0.238

Low

697355

ISC10
Meiosis-specific protein ISC10

1

0

High-throughput

0.238

Low

732064

YKO7
Putative uncharacterized protein YKL147C

1

0

High-throughput

0.238

Low

747206

EXO84
Exocyst complex component EXO84

1

0

High-throughput

0.238

Low

753259

YHE9
Uncharacterized protein YHL049C

1

0

High-throughput

0.238

Low

761118

GEM1
Mitochondrial Rho GTPase 1

1

0

High-throughput

0.238

Low

761122

NU157
Nucleoporin NUP157

1

0

High-throughput

0.238

Low

761134

PEX8
Peroxisomal biogenesis factor 8

1

0

High-throughput

0.238

Low

761137

PRA1
Prenylated Rab acceptor 1

1

0

High-throughput

0.238

Low

761145

RAV2
Regulator of V-ATPase in vacuolar membrane protein 2

1

0

High-throughput

0.238

Low

761146

GMC1
Putative multicopper oxidase GMC1

1

0

High-throughput

0.238

Low

761147

RM51
Large ribosomal subunit protein mL43

1

0

High-throughput

0.238

Low

761149

PIG1
Serine/threonine-protein phosphatase 1 regulatory subunit PIG1

1

0

High-throughput

0.238

Low

761158

THI72
Thiamine transporter THI72

1

0

High-throughput

0.238

Low

761169

LPX1
Peroxisomal membrane protein LPX1

1

0

High-throughput

0.238

Low

761173

YL149
Uncharacterized protein YLR149C

1

0

High-throughput

0.238

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024