Protein: YG5B
Uncharacterized RNA-binding protein YGR250C

Gene: YG5B, YGR250C
Organism: Saccharomyces cerevisiae S288C
Interactions: 50
UniProt ID: P53316

Gene Ontology (top 5):
GO:0000381 - regulation of alternative mRNA splicing, via spliceosome
GO:0003729 - mRNA binding
GO:0003730 - mRNA 3'-UTR binding
GO:0005634 - nucleus
GO:0005737 - cytoplasm

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

775546

SGN1
RNA-binding protein SGN1

9

18

Small-scale

0.976

High

376874

PABP
Polyadenylate-binding protein, cytoplasmic and nuclear

2

18

Small-scale

0.789

High

861434

NCBP2
Nuclear cap-binding protein subunit 2

2

18

High-throughput

0.775

High

339764

CDK1
Cyclin-dependent kinase 1

2

5

Small-scale

0.754

High

676241

XPO1
Exportin-1

1

6

High-throughput

0.691

High

810818

IKS1
Probable serine/threonine-protein kinase IKS1

1

7

High-throughput

0.691

High

861432

PRP11
Pre-mRNA-splicing factor PRP11

1

1

High-throughput

0.691

High

861426

PPID
Peptidyl-prolyl cis-trans isomerase CPR6

1

0

High-throughput

0.663

High

694154

PUB1
Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1

1

19

High-throughput

0.618

High

491961

HSP71
Heat shock protein SSA1

2

4

High-throughput

0.584

High

763816

RBG1
Ribosome-interacting GTPase 1

2

3

Small-scale

0.576

High

715367

SPT7
Transcriptional activator SPT7

1

3

High-throughput

0.536

High

814145

SSN8
RNA polymerase II holoenzyme cyclin-like subunit

1

4

High-throughput

0.536

High

837266

IMDH4
Inosine-5'-monophosphate dehydrogenase 4

1

2

High-throughput

0.536

High

861429

GCN5
Histone acetyltransferase GCN5

1

10

High-throughput

0.536

High

861437

SUS1
Transcription and mRNA export factor SUS1

1

4

High-throughput

0.536

High

392516

H2A2
Histone H2A.2

1

8

High-throughput

0.515

High

425134

LEUC
3-isopropylmalate dehydratase

1

3

High-throughput

0.515

High

764103

RV167
Reduced viability upon starvation protein 167

1

2

High-throughput

0.515

High

861431

HMO1
High mobility group protein 1

1

6

High-throughput

0.515

High

381619

GAL80
Galactose/lactose metabolism regulatory protein GAL80

1

0

High-throughput

0.493

High

811408

TCPQ
T-complex protein 1 subunit theta

1

0

High-throughput

0.493

High

861438

NOP14
Nucleolar complex protein 14

1

0

High-throughput

0.493

High

366653

HSP82
ATP-dependent molecular chaperone HSP82

1

4

High-throughput

0.479

High

410430

SC160
Protein SCP160

1

20

High-throughput

0.479

High

544152

HSC82
ATP-dependent molecular chaperone HSC82

1

4

High-throughput

0.479

High

558173

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

1

High-throughput

0.479

High

605097

XRN1
5'-3' exoribonuclease 1

1

4

Small-scale

0.479

High

662885

TF2B
Transcription initiation factor IIB

1

2

High-throughput

0.479

High

728288

DEF1
RNA polymerase II degradation factor 1

1

3

High-throughput

0.479

High

730869

CENPA
Histone H3-like centromeric protein CSE4

1

2

High-throughput

0.479

High

775566

MPH1
ATP-dependent DNA helicase MPH1

1

8

High-throughput

0.479

High

861436

CMR1
DNA damage-binding protein CMR1

1

6

High-throughput

0.479

High

334963

G3P1
Glyceraldehyde-3-phosphate dehydrogenase 1

1

2

High-throughput

0.470

High

667823

SEC65
Signal recognition particle subunit SEC65

1

1

High-throughput

0.470

High

752048

SRP72
Signal recognition particle subunit SRP72

1

2

High-throughput

0.470

High

858764

YOR1
Oligomycin resistance ATP-dependent permease YOR1

1

1

High-throughput

0.470

High

701007

SMY2
Protein SMY2

1

0

High-throughput

0.458

High

861427

CUZ1
CDC48-associated ubiquitin-like/zinc finger protein 1

1

0

Small-scale

0.458

High

861428

APJ1
J domain-containing protein APJ1

1

0

High-throughput

0.458

High

861430

MTQ2
eRF1 methyltransferase catalytic subunit MTQ2

1

0

High-throughput

0.458

High

861433

VAM6
Vacuolar morphogenesis protein 6

1

0

High-throughput

0.458

High

494559

HSP72
Heat shock protein SSA2

1

4

High-throughput

0.445

High

837444

UBP8
Ubiquitin carboxyl-terminal hydrolase 8

1

2

High-throughput

0.445

High

861435

AHA1
Hsp90 co-chaperone AHA1

1

0

High-throughput

0.438

High

397608

OTC
Ornithine carbamoyltransferase

1

0

High-throughput

0.269

Low

743819

ATPG
ATP synthase subunit gamma, mitochondrial

1

0

High-throughput

0.269

Low

474357

U5072
UPF0507 protein YML002W

1

0

High-throughput

0.249

Low

547999

SEC11
Signal peptidase complex catalytic subunit SEC11

1

0

High-throughput

0.249

Low

701520

SC61A
Protein transport protein SEC61

1

0

High-throughput

0.249

Low


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Last updated: 15 Jul 2024