Protein: HMGA1
High mobility group protein HMG-I/HMG-Y (HMG-I(Y)) (High mobility group AT-hook protein 1) (High mobility group protein A1) (High mobility group protein R)

Gene: HMGA1
Organism: Homo sapiens
Interactions: 488
UniProt ID: P17096

Gene Ontology (top 5):
GO:0000978 - RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000987 - cis-regulatory region sequence-specific DNA binding
GO:0001221 - transcription coregulator binding
GO:0003677 - DNA binding
GO:0003680 - minor groove of adenine-thymine-rich DNA binding

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

601620

H31
Histone H3.1

5

5

High-throughput

0.702

High

601756

H2A2B
Histone H2A type 2-B

3

6

High-throughput

0.671

High

601550

CEBPB
CCAAT/enhancer-binding protein beta

3

3

Small-scale

0.670

High

486929

PARP1
Poly [ADP-ribose] polymerase 1

3

2

Small-scale

0.664

High

601701

H2B2E
Histone H2B type 2-E

3

15

High-throughput

0.662

High

601695

EZH2
Histone-lysine N-methyltransferase EZH2

3

3

Small-scale

0.656

High

601584

TXLNA
Alpha-taxilin

3

2

High-throughput

0.650

High

601583

PPARG
Peroxisome proliferator-activated receptor gamma

3

1

Small-scale

0.647

High

443163

CDK1
Cyclin-dependent kinase 1

3

1

Small-scale

0.646

High

464791

SP1
Transcription factor Sp1

3

0

Small-scale

0.642

High

283028

PSIP1
PC4 and SFRS1-interacting protein

2

3

Small-scale

0.641

High

601743

H32
Histone H3.2

3

5

High-throughput

0.640

High

601613

H4
Histone H4

3

0

High-throughput

0.634

High

277547

H2AY
Core histone macro-H2A.1

2

8

High-throughput

0.628

High

601619

CSK21
Casein kinase II subunit alpha

2

1

Small-scale

0.625

High

595670

H13
Histone H1.3

2

3

High-throughput

0.621

High

601811

ANM6
Protein arginine N-methyltransferase 6

2

0

Small-scale

0.618

High

601604

HMGA2
High mobility group protein HMGI-C

3

0

High-throughput

0.613

High

595917

H12
Histone H1.2

2

3

High-throughput

0.611

High

601601

MECP2
Methyl-CpG-binding protein 2

2

1

High-throughput

0.611

High

601651

CBX3
Chromobox protein homolog 3

2

5

High-throughput

0.611

High

601728

H2A2A
Histone H2A type 2-A

2

6

High-throughput

0.611

High

601791

KAT6A
Histone acetyltransferase KAT6A

2

5

High-throughput

0.611

High

601832

H2B1L
Histone H2B type 1-L

2

15

High-throughput

0.611

High

211266

RFOX2
RNA binding protein fox-1 homolog 2

2

1

High-throughput

0.606

High

601568

APEX1
DNA repair nuclease/redox regulator APEX1

2

0

Small-scale

0.602

High

243530

SMCA5
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5

2

4

High-throughput

0.601

High

355426

NSD2
Histone-lysine N-methyltransferase NSD2

2

3

High-throughput

0.601

High

542320

TOP2A
DNA topoisomerase 2-alpha

2

1

High-throughput

0.601

High

601578

BMI1
Polycomb complex protein BMI-1

2

2

High-throughput

0.601

High

601608

H2BFS
Histone H2B type F-S

2

15

High-throughput

0.601

High

601700

H31T
Histone H3.1t

2

5

High-throughput

0.601

High

601713

H2B2F
Histone H2B type 2-F

2

15

High-throughput

0.601

High

601799

H2B1H
Histone H2B type 1-H

2

15

High-throughput

0.601

High

601894

PARP2
Poly [ADP-ribose] polymerase 2

2

1

High-throughput

0.601

High

601897

BAZ1B
Tyrosine-protein kinase BAZ1B

2

5

High-throughput

0.601

High

413146

P53
Cellular tumor antigen p53

2

0

Small-scale

0.598

High

557838

XRCC6
X-ray repair cross-complementing protein 6

1

1

Small-scale

0.597

High

429258

JUN
Transcription factor Jun

2

3

Small-scale

0.594

High

601790

CBP
CREB-binding protein

2

3

Small-scale

0.594

High

601810

NSD1
Histone-lysine N-methyltransferase, H3 lysine-36 specific

2

2

High-throughput

0.588

High

285580

BAF
Barrier-to-autointegration factor

2

0

Small-scale

0.585

High

601606

FOXA1
Hepatocyte nuclear factor 3-alpha

2

0

High-throughput

0.585

High

601612

WDR5
WD repeat-containing protein 5

2

0

High-throughput

0.585

High

601642

C1QBP
Complement component 1 Q subcomponent-binding protein, mitochondrial

2

0

High-throughput

0.585

High

601752

NAA40
N-alpha-acetyltransferase 40

2

0

High-throughput

0.585

High

259398

BRD4
Bromodomain-containing protein 4

2

5

High-throughput

0.584

High

323158

TRI37
E3 ubiquitin-protein ligase TRIM37

2

2

High-throughput

0.584

High

371094

MYC
Myc proto-oncogene protein

2

1

High-throughput

0.584

High

521525

H14
Histone H1.4

2

3

High-throughput

0.584

High

601563

H2B1O
Histone H2B type 1-O

2

15

High-throughput

0.584

High

601609

H2B1D
Histone H2B type 1-D

2

15

High-throughput

0.584

High

601614

H2B1C
Histone H2B type 1-C/E/F/G/I

2

15

High-throughput

0.584

High

601628

H33
Histone H3.3

2

5

High-throughput

0.584

High

446619

NPM
Nucleophosmin

2

0

Small-scale

0.577

High

601549

KPCA
Protein kinase C alpha type

2

0

Small-scale

0.577

High

601621

NOP14
Nucleolar protein 14

2

0

High-throughput

0.576

High

601658

ORC2
Origin recognition complex subunit 2

2

0

Small-scale

0.576

High

601851

RGAP1
Rac GTPase-activating protein 1

2

0

High-throughput

0.576

High

601636

MP2K1
Dual specificity mitogen-activated protein kinase kinase 1

2

3

High-throughput

0.571

High

601687

RBP1
RalA-binding protein 1

2

1

High-throughput

0.571

High

601831

H2B1M
Histone H2B type 1-M

2

15

High-throughput

0.571

High

601567

PTBP1
Polypyrimidine tract-binding protein 1

1

1

Small-scale

0.568

High

601909

PA2G4
Proliferation-associated protein 2G4

1

1

Small-scale

0.568

High

601655

ATM
Serine-protein kinase ATM

1

1

Small-scale

0.561

High

601885

PD1L1
Programmed cell death 1 ligand 1

1

2

Small-scale

0.561

High

601678

CUL7
Cullin-7

2

0

High-throughput

0.559

High

601573

ELF1
ETS-related transcription factor Elf-1

1

0

Small-scale

0.554

High

601921

ORC6
Origin recognition complex subunit 6

1

0

Small-scale

0.554

High

172010

HNRDL
Heterogeneous nuclear ribonucleoprotein D-like

1

3

Small-scale

0.550

High

186615

HMGB3
High mobility group protein B3

1

2

Small-scale

0.550

High

402841

ANXA1
Annexin A1

1

1

Small-scale

0.550

High

456596

ANXA2
Annexin A2

1

1

Small-scale

0.550

High

481078

HMGB1
High mobility group protein B1

1

3

Small-scale

0.550

High

484899

ROA1
Heterogeneous nuclear ribonucleoprotein A1

1

3

Small-scale

0.550

High

576274

HNRPL
Heterogeneous nuclear ribonucleoprotein L

1

1

Small-scale

0.550

High

601566

HMGB2
High mobility group protein B2

1

3

Small-scale

0.550

High

601599

MAP2
Methionine aminopeptidase 2

1

1

Small-scale

0.550

High

601663

HNRPD
Heterogeneous nuclear ribonucleoprotein D0

1

3

Small-scale

0.550

High

601689

PCBP1
Poly(rC)-binding protein 1

1

1

Small-scale

0.550

High

601829

ROAA
Heterogeneous nuclear ribonucleoprotein A/B

1

3

Small-scale

0.550

High

601879

OLA1
Obg-like ATPase 1

1

1

Small-scale

0.550

High

440347

FYN
Tyrosine-protein kinase Fyn

2

0

High-throughput

0.547

High

601571

PEBP1
Phosphatidylethanolamine-binding protein 1

2

0

High-throughput

0.547

High

601603

KS6A3
Ribosomal protein S6 kinase alpha-3

2

0

High-throughput

0.547

High

601910

KCC2A
Calcium/calmodulin-dependent protein kinase type II subunit alpha

2

0

High-throughput

0.547

High

250445

HNRPQ
Heterogeneous nuclear ribonucleoprotein Q

1

0

Small-scale

0.544

High

478900

PO2F2
POU domain, class 2, transcription factor 2

1

3

Small-scale

0.536

High

576155

PO2F1
POU domain, class 2, transcription factor 1

1

3

Small-scale

0.536

High

130369

SPT5H
Transcription elongation factor SPT5

1

2

High-throughput

0.536

High

133079

FOXE1
Forkhead box protein E1

1

1

High-throughput

0.536

High

285068

EED
Polycomb protein EED

1

1

High-throughput

0.536

High

316742

MTA2
Metastasis-associated protein MTA2

1

2

High-throughput

0.536

High

320310

PHF14
PHD finger protein 14

1

1

High-throughput

0.536

High

331958

KAT7
Histone acetyltransferase KAT7

1

1

High-throughput

0.536

High

340819

NFAC1
Nuclear factor of activated T-cells, cytoplasmic 1

1

3

High-throughput

0.536

High

501907

H2AZ
Histone H2A.Z

1

7

High-throughput

0.536

High

502228

H2A1
Histone H2A type 1

1

6

High-throughput

0.536

High

507070

UBB
Polyubiquitin-B [Cleaved into: Ubiquitin]

1

1

High-throughput

0.536

High

559210

XRCC5
X-ray repair cross-complementing protein 5

1

1

High-throughput

0.536

High

591466

H2AX
Histone H2AX

1

7

High-throughput

0.536

High

601569

SMCA1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1

1

4

High-throughput

0.536

High

601572

CDC27
Cell division cycle protein 27 homolog

1

2

High-throughput

0.536

High

601575

MCM4
DNA replication licensing factor MCM4

1

3

High-throughput

0.536

High

601576

MCM7
DNA replication licensing factor MCM7

1

3

High-throughput

0.536

High

601579

RFC2
Replication factor C subunit 2

1

1

High-throughput

0.536

High

601585

RFC5
Replication factor C subunit 5

1

1

High-throughput

0.536

High

601589

CBX5
Chromobox protein homolog 5

1

5

High-throughput

0.536

High

601592

CDK8
Cyclin-dependent kinase 8

1

3

High-throughput

0.536

High

601595

MCM2
DNA replication licensing factor MCM2

1

3

High-throughput

0.536

High

601600

SMCA4
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4

1

3

High-throughput

0.536

High

601605

HIRA
Protein HIRA

1

2

High-throughput

0.536

High

601624

PRKDC
DNA-dependent protein kinase catalytic subunit

1

1

High-throughput

0.536

High

601627

CBX1
Chromobox protein homolog 1

1

5

High-throughput

0.536

High

601637

TOP2B
DNA topoisomerase 2-beta

1

1

High-throughput

0.536

High

601644

RBBP4
Histone-binding protein RBBP4

1

2

High-throughput

0.536

High

601650

MP2K5
Dual specificity mitogen-activated protein kinase kinase 5

1

1

High-throughput

0.536

High

601656

MTA1
Metastasis-associated protein MTA1

1

2

High-throughput

0.536

High

601666

SAFB2
Scaffold attachment factor B2

1

2

High-throughput

0.536

High

601668

ZMYM3
Zinc finger MYM-type protein 3

1

1

High-throughput

0.536

High

601670

MCM6
DNA replication licensing factor MCM6

1

3

High-throughput

0.536

High

601672

MDC1
Mediator of DNA damage checkpoint protein 1

1

4

High-throughput

0.536

High

601674

CBX2
Chromobox protein homolog 2

1

5

High-throughput

0.536

High

601675

CHD4
Chromodomain-helicase-DNA-binding protein 4

1

3

High-throughput

0.536

High

601686

RBBP5
Retinoblastoma-binding protein 5

1

2

High-throughput

0.536

High

601698

RBBP7
Histone-binding protein RBBP7

1

2

High-throughput

0.536

High

601718

RIF1
Telomere-associated protein RIF1

1

4

High-throughput

0.536

High

601720

ZMYM4
Zinc finger MYM-type protein 4

1

1

High-throughput

0.536

High

601738

BCOR
BCL-6 corepressor

1

1

High-throughput

0.536

High

601739

SRCAP
Helicase SRCAP

1

4

High-throughput

0.536

High

601742

UBN2
Ubinuclein-2

1

4

High-throughput

0.536

High

601747

POGZ
Pogo transposable element with ZNF domain

1

1

High-throughput

0.536

High

601748

RAI1
Retinoic acid-induced protein 1

1

5

High-throughput

0.536

High

601751

PB1
Protein polybromo-1

1

2

High-throughput

0.536

High

601760

VRK3
Serine/threonine-protein kinase VRK3

1

1

High-throughput

0.536

High

601771

RN169
E3 ubiquitin-protein ligase RNF169

1

1

High-throughput

0.536

High

601773

Z280C
Zinc finger protein 280C

1

1

High-throughput

0.536

High

601780

PHF10
PHD finger protein 10

1

3

High-throughput

0.536

High

601781

PHIP
PH-interacting protein

1

2

High-throughput

0.536

High

601785

ELYS
Protein ELYS

1

5

High-throughput

0.536

High

601787

TRIB2
Tribbles homolog 2

1

1

High-throughput

0.536

High

601794

SMRC1
SWI/SNF complex subunit SMARCC1

1

2

High-throughput

0.536

High

601798

H2A1C
Histone H2A type 1-C

1

6

High-throughput

0.536

High

601800

SMCE1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1

1

2

High-throughput

0.536

High

601807

CHAP1
Chromosome alignment-maintaining phosphoprotein 1

1

5

High-throughput

0.536

High

601813

PWP2A
PWWP domain-containing protein 2A

1

3

High-throughput

0.536

High

601821

IWS1
Protein IWS1 homolog

1

4

High-throughput

0.536

High

601822

RSF1
Remodeling and spacing factor 1

1

6

High-throughput

0.536

High

601824

UHRF1
E3 ubiquitin-protein ligase UHRF1

1

1

High-throughput

0.536

High

601825

RING2
E3 ubiquitin-protein ligase RING2

1

3

High-throughput

0.536

High

601827

SCAFB
Protein SCAF11

1

3

High-throughput

0.536

High

601828

BARD1
BRCA1-associated RING domain protein 1

1

1

High-throughput

0.536

High

601841

ZSA5A
Zinc finger and SCAN domain-containing protein 5A

1

2

High-throughput

0.536

High

601868

HM20A
High mobility group protein 20A

1

4

High-throughput

0.536

High

601869

BRD7
Bromodomain-containing protein 7

1

3

High-throughput

0.536

High

601874

BAZ1A
Bromodomain adjacent to zinc finger domain protein 1A

1

6

High-throughput

0.536

High

601887

H2AW
Core histone macro-H2A.2

1

8

High-throughput

0.536

High

601891

ASH2L
Set1/Ash2 histone methyltransferase complex subunit ASH2

1

2

High-throughput

0.536

High

601895

TCF20
Transcription factor 20

1

4

High-throughput

0.536

High

601900

APC7
Anaphase-promoting complex subunit 7

1

1

High-throughput

0.536

High

601901

RCOR1
REST corepressor 1

1

3

High-throughput

0.536

High

601903

TPX2
Targeting protein for Xklp2

1

1

High-throughput

0.536

High

601913

TR150
Thyroid hormone receptor-associated protein 3

1

3

High-throughput

0.536

High

601917

MTF2
Metal-response element-binding transcription factor 2

1

1

High-throughput

0.536

High

601925

CABIN
Calcineurin-binding protein cabin-1

1

5

High-throughput

0.536

High

520508

RARA
Retinoic acid receptor alpha

1

1

Small-scale

0.527

High

298296

DNJC8
DnaJ homolog subfamily C member 8

1

0

Small-scale

0.527

High

430977

LA
Lupus La protein

1

0

Small-scale

0.527

High

569048

T2FB
General transcription factor IIF subunit 2

1

0

Small-scale

0.527

High

601552

RCC1
Regulator of chromosome condensation

1

0

Small-scale

0.527

High

601554

NUCL
Nucleolin

1

0

Small-scale

0.527

High

601556

IF2B
Eukaryotic translation initiation factor 2 subunit 2

1

0

Small-scale

0.527

High

601648

PP1R8
Nuclear inhibitor of protein phosphatase 1

1

0

Small-scale

0.527

High

601737

CWC27
Spliceosome-associated protein CWC27 homolog

1

0

Small-scale

0.527

High

601633

EWS
RNA-binding protein EWS

1

0

High-throughput

0.518

High

132697

BMAL1
Basic helix-loop-helix ARNT-like protein 1

1

2

High-throughput

0.515

High

174214

ARHGA
Rho guanine nucleotide exchange factor 10

1

2

High-throughput

0.515

High

418821

H2A1B
Histone H2A type 1-B/E

1

6

High-throughput

0.515

High

587550

DESP
Desmoplakin

1

1

High-throughput

0.515

High

595301

H15
Histone H1.5

1

3

High-throughput

0.515

High

601581

SOX6
Transcription factor SOX-6

1

3

High-throughput

0.515

High

601596

RGS6
Regulator of G-protein signaling 6

1

1

High-throughput

0.515

High

601597

RGS3
Regulator of G-protein signaling 3

1

2

High-throughput

0.515

High

601729

ELP2
Elongator complex protein 2

1

2

High-throughput

0.515

High

601786

TITIN
Titin

1

2

High-throughput

0.515

High

601809

H2A1H
Histone H2A type 1-H

1

6

High-throughput

0.515

High

601823

MINT
Msx2-interacting protein

1

2

High-throughput

0.515

High

601834

AKAP9
A-kinase anchor protein 9

1

2

High-throughput

0.515

High

125824

AP4M1
AP-4 complex subunit mu-1

1

0

High-throughput

0.513

High

138625

IMA4
Importin subunit alpha-4

1

0

High-throughput

0.513

High

355138

ACL6A
Actin-like protein 6A

1

0

High-throughput

0.513

High

446506

DPOLB
DNA polymerase beta

1

0

High-throughput

0.513

High

455690

H10
Histone H1.0

1

0

High-throughput

0.513

High

593011

CREB1
Cyclic AMP-responsive element-binding protein 1

1

0

High-throughput

0.513

High

601561

KAPCG
cAMP-dependent protein kinase catalytic subunit gamma

1

0

High-throughput

0.513

High

601564

RPB1
DNA-directed RNA polymerase II subunit RPB1

1

0

High-throughput

0.513

High

601591

NEDD4
E3 ubiquitin-protein ligase NEDD4

1

0

High-throughput

0.513

High

601598

DNLI3
DNA ligase 3

1

0

High-throughput

0.513

High

601602

HCFC1
Host cell factor 1

1

0

High-throughput

0.513

High

601632

XPC
DNA repair protein complementing XP-C cells

1

0

High-throughput

0.513

High

601646

SNF5
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1

1

0

High-throughput

0.513

High

601653

SRSF9
Serine/arginine-rich splicing factor 9

1

0

High-throughput

0.513

High

601660

CUL3
Cullin-3

1

0

High-throughput

0.513

High

601677

NUMA1
Nuclear mitotic apparatus protein 1

1

0

High-throughput

0.513

High

601680

SUZ12
Polycomb protein SUZ12

1

0

High-throughput

0.513

High

601694

VPS72
Vacuolar protein sorting-associated protein 72 homolog

1

0

High-throughput

0.513

High

601697

DDB1
DNA damage-binding protein 1

1

0

High-throughput

0.513

High

601714

HP1B3
Heterochromatin protein 1-binding protein 3

1

0

High-throughput

0.513

High

601724

MSL1
Male-specific lethal 1 homolog

1

0

High-throughput

0.513

High

601725

INT3
Integrator complex subunit 3

1

0

High-throughput

0.513

High

601734

CTR9
RNA polymerase-associated protein CTR9 homolog

1

0

High-throughput

0.513

High

601778

CDC26
Anaphase-promoting complex subunit CDC26

1

0

High-throughput

0.513

High

601783

ING5
Inhibitor of growth protein 5

1

0

High-throughput

0.513

High

601788

H1X
Histone H1.10

1

0

High-throughput

0.513

High

601802

P5CR2
Pyrroline-5-carboxylate reductase 2

1

0

High-throughput

0.513

High

601808

LCOR
Ligand-dependent corepressor

1

0

High-throughput

0.513

High

601812

ZN512
Zinc finger protein 512

1

0

High-throughput

0.513

High

601817

VPS35
Vacuolar protein sorting-associated protein 35

1

0

High-throughput

0.513

High

601847

DPY30
Protein dpy-30 homolog

1

0

High-throughput

0.513

High

601857

ZN644
Zinc finger protein 644

1

0

High-throughput

0.513

High

601872

DPOE3
DNA polymerase epsilon subunit 3

1

0

High-throughput

0.513

High

601873

CHRC1
Chromatin accessibility complex protein 1

1

0

High-throughput

0.513

High

601876

STK36
Serine/threonine-protein kinase 36

1

0

High-throughput

0.513

High

601877

SOSSC
SOSS complex subunit C

1

0

High-throughput

0.513

High

601890

NCDN
Neurochondrin

1

0

High-throughput

0.513

High

601898

SCOC
Short coiled-coil protein

1

0

High-throughput

0.513

High

601911

RUVB2
RuvB-like 2

1

0

High-throughput

0.513

High

583434

ATF2
Cyclic AMP-dependent transcription factor ATF-2

1

2

Small-scale

0.501

High

601555

NFKB1
Nuclear factor NF-kappa-B p105 subunit

1

1

Small-scale

0.501

High

601623

SRPK2
SRSF protein kinase 2

1

2

High-throughput

0.501

High

601638

PO3F1
POU domain, class 3, transcription factor 1

1

3

Small-scale

0.501

High

601690

PCBP2
Poly(rC)-binding protein 2

1

2

Small-scale

0.501

High

601792

KAT2B
Histone acetyltransferase KAT2B

1

2

Small-scale

0.501

High

144226

ACACB
Acetyl-CoA carboxylase 2

1

0

High-throughput

0.493

High

192187

YKT6
Synaptobrevin homolog YKT6

1

0

High-throughput

0.493

High

601586

HD
Huntingtin

1

0

High-throughput

0.493

High

601662

TF2H3
General transcription factor IIH subunit 3

1

0

High-throughput

0.493

High

601693

CIP4
Cdc42-interacting protein 4

1

0

High-throughput

0.493

High

601709

CAVN4
Caveolae-associated protein 4

1

0

High-throughput

0.493

High

601735

FBX38
F-box only protein 38

1

0

High-throughput

0.493

High

601784

SEPT1
Septin-1

1

0

High-throughput

0.493

High

601789

PHF3
PHD finger protein 3

1

0

High-throughput

0.493

High

601793

SHIP1
Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1

1

0

High-throughput

0.493

High

601835

JPH2
Junctophilin-2

1

0

High-throughput

0.493

High

601854

ATX3L
Ataxin-3-like protein

1

0

High-throughput

0.493

High

601926

ROBO1
Roundabout homolog 1

1

0

High-throughput

0.493

High

64933

ARRD5
Arrestin domain-containing protein 5

1

1

High-throughput

0.489

High

388999

FINC
Fibronectin

1

1

High-throughput

0.489

High

601679

EMC2
ER membrane protein complex subunit 2

1

1

High-throughput

0.489

High

601804

WDR89
WD repeat-containing protein 89

1

1

High-throughput

0.489

High

421454

A4
Amyloid-beta precursor protein

1

0

High-throughput

0.480

High

533868

IRF1
Interferon regulatory factor 1

1

0

Small-scale

0.480

High

601562

NFYA
Nuclear transcription factor Y subunit alpha

1

0

Small-scale

0.480

High

601570

MK01
Mitogen-activated protein kinase 1

1

0

Small-scale

0.480

High

601657

ORC1
Origin recognition complex subunit 1

1

0

Small-scale

0.480

High

601882

HPF1
Histone PARylation factor 1

1

0

Small-scale

0.480

High

135049

IF2B3
Insulin-like growth factor 2 mRNA-binding protein 3

1

2

High-throughput

0.479

High

142821

NFIB
Nuclear factor 1 B-type

1

1

High-throughput

0.479

High

160045

CHD1
Chromodomain-helicase-DNA-binding protein 1

1

3

Small-scale

0.479

High

171834

ZN263
Zinc finger protein 263

1

1

Small-scale

0.479

High

176139

PER2
Period circadian protein homolog 2

1

2

Small-scale

0.479

High

190117

TNC18
Trinucleotide repeat-containing gene 18 protein

1

4

High-throughput

0.479

High

256762

H2B1K
Histone H2B type 1-K

1

15

High-throughput

0.479

High

271878

OBSL1
Obscurin-like protein 1

1

2

High-throughput

0.479

High

330644

KI20A
Kinesin-like protein KIF20A

1

2

High-throughput

0.479

High

334677

IPO7
Importin-7

1

2

Small-scale

0.479

High

345338

STAU1
Double-stranded RNA-binding protein Staufen homolog 1

1

1

High-throughput

0.479

High

351370

CBX7
Chromobox protein homolog 7

1

5

Small-scale

0.479

High

400241

RAF1
RAF proto-oncogene serine/threonine-protein kinase

1

1

High-throughput

0.479

High

405767

MYCN
N-myc proto-oncogene protein

1

1

High-throughput

0.479

High

449675

H2B1J
Histone H2B type 1-J

1

15

High-throughput

0.479

High

461119

HS90A
Heat shock protein HSP 90-alpha

1

1

High-throughput

0.479

High

468040

HS90B
Heat shock protein HSP 90-beta

1

1

High-throughput

0.479

High

473771

NFIC
Nuclear factor 1 C-type

1

3

High-throughput

0.479

High

601551

IBP3
Insulin-like growth factor-binding protein 3

1

1

Small-scale

0.479

High

601565

CDK2
Cyclin-dependent kinase 2

1

1

High-throughput

0.479

High

601574

H2B1B
Histone H2B type 1-B

1

15

High-throughput

0.479

High

601593

CENPA
Histone H3-like centromeric protein A

1

5

High-throughput

0.479

High

601616

RS27A
Ubiquitin-ribosomal protein eS31 fusion protein

1

2

High-throughput

0.479

High

601617

RL40
Ubiquitin-ribosomal protein eL40 fusion protein

1

2

High-throughput

0.479

High

601634

PO5F1
POU domain, class 5, transcription factor 1

1

3

High-throughput

0.479

High

601639

KMT2A
Histone-lysine N-methyltransferase 2A

1

3

High-throughput

0.479

High

601641

TF65
Transcription factor p65

1

3

High-throughput

0.479

High

601643

GOGA3
Golgin subfamily A member 3

1

1

High-throughput

0.479

High

601647

GRSF1
G-rich sequence factor 1

1

1

High-throughput

0.479

High

601659

IKZF1
DNA-binding protein Ikaros

1

1

High-throughput

0.479

High

601673

UBP10
Ubiquitin carboxyl-terminal hydrolase 10

1

2

Small-scale

0.479

High

601676

IMB1
Importin subunit beta-1

1

2

Small-scale

0.479

High

601681

TNIP1
TNFAIP3-interacting protein 1

1

1

High-throughput

0.479

High

601699

HIF1A
Hypoxia-inducible factor 1-alpha

1

1

Small-scale

0.479

High

601707

PAN2
PAN2-PAN3 deadenylation complex catalytic subunit PAN2

1

3

High-throughput

0.479

High

601721

RN123
E3 ubiquitin-protein ligase RNF123

1

2

High-throughput

0.479

High

601722

A16L1
Autophagy-related protein 16-1

1

2

High-throughput

0.479

High

601727

H2B2C
Putative histone H2B type 2-C

1

15

High-throughput

0.479

High

601731

H3C
Histone H3.3C

1

5

High-throughput

0.479

High

601753

ZCH18
Zinc finger CCCH domain-containing protein 18

1

5

High-throughput

0.479

High

601754

TAXB1
Tax1-binding protein 1

1

1

High-throughput

0.479

High

601766

H2B3B
Histone H2B type 3-B

1

15

High-throughput

0.479

High

601795

TNPO1
Transportin-1

1

2

Small-scale

0.479

High

601796

USP9X
Ubiquitin carboxyl-terminal hydrolase 9X

1

2

Small-scale

0.479

High

601797

UBP7
Ubiquitin carboxyl-terminal hydrolase 7

1

4

Small-scale

0.479

High

601801

H2B1A
Histone H2B type 1-A

1

15

High-throughput

0.479

High

601819

MED15
Mediator of RNA polymerase II transcription subunit 15

1

4

High-throughput

0.479

High

601820

RANB9
Ran-binding protein 9

1

1

High-throughput

0.479

High

601830

H2B1N
Histone H2B type 1-N

1

15

High-throughput

0.479

High

601833

VRK1
Serine/threonine-protein kinase VRK1

1

1

High-throughput

0.479

High

601840

PCGF1
Polycomb group RING finger protein 1

1

2

High-throughput

0.479

High

601861

ECT2
Protein ECT2

1

2

High-throughput

0.479

High

601864

NANOG
Homeobox protein NANOG

1

1

High-throughput

0.479

High

601867

CWC22
Pre-mRNA-splicing factor CWC22 homolog

1

3

Small-scale

0.479

High

601896

TBK1
Serine/threonine-protein kinase TBK1

1

1

High-throughput

0.479

High

601902

IKZF3
Zinc finger protein Aiolos

1

1

High-throughput

0.479

High

601907

UBP24
Ubiquitin carboxyl-terminal hydrolase 24

1

2

Small-scale

0.479

High

601918

DCAF1
DDB1- and CUL4-associated factor 1

1

1

Small-scale

0.479

High

601922

MAFB
Transcription factor MafB

1

1

High-throughput

0.479

High

601924

NCOR2
Nuclear receptor corepressor 2

1

4

Small-scale

0.479

High

601630

ECT2L
Epithelial cell-transforming sequence 2 oncogene-like

1

2

High-throughput

0.470

High

601875

STRN4
Striatin-4

1

1

High-throughput

0.470

High

601927

PCLO
Protein piccolo

1

1

High-throughput

0.470

High

601843

HEMGN
Hemogen

1

0

Small-scale

0.460

High

601865

RENT2
Regulator of nonsense transcripts 2

1

0

High-throughput

0.460

High

126055

AP3B1
AP-3 complex subunit beta-1

1

0

Small-scale

0.458

High

136821

AGRIN
Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment

1

0

High-throughput

0.458

High

156928

CTRO
Citron Rho-interacting kinase

1

0

High-throughput

0.458

High

222698

PRC1
Protein regulator of cytokinesis 1

1

0

High-throughput

0.458

High

254324

CC14B
Dual specificity protein phosphatase CDC14B

1

0

High-throughput

0.458

High

297443

PIAS1
E3 SUMO-protein ligase PIAS1

1

0

High-throughput

0.458

High

362720

EGFR
Epidermal growth factor receptor

1

0

High-throughput

0.458

High

378358

IFNB
Interferon beta

1

0

Small-scale

0.458

High

403268

CSF2
Granulocyte-macrophage colony-stimulating factor

1

0

Small-scale

0.458

High

482301

F16P1
Fructose-1,6-bisphosphatase 1

1

0

High-throughput

0.458

High

583176

FOLR1
Folate receptor alpha

1

0

High-throughput

0.458

High

601557

BTF3
Transcription factor BTF3

1

0

High-throughput

0.458

High

601558

LMNB1
Lamin-B1

1

0

High-throughput

0.458

High

601559

HNF1A
Hepatocyte nuclear factor 1-alpha

1

0

Small-scale

0.458

High

601577

GPC1
Glypican-1 [Cleaved into: Secreted glypican-1]

1

0

High-throughput

0.458

High

601580

MSX2
Homeobox protein MSX-2

1

0

High-throughput

0.458

High

601587

NKX21
Homeobox protein Nkx-2.1

1

0

High-throughput

0.458

High

601588

EFTS
Elongation factor Ts, mitochondrial

1

0

High-throughput

0.458

High

601590

RS10
Small ribosomal subunit protein eS10

1

0

High-throughput

0.458

High

601610

NLRP6
NACHT, LRR and PYD domains-containing protein 6

1

0

High-throughput

0.458

High

601611

IL2
Interleukin-2

1

0

Small-scale

0.458

High

601615

RBX1
E3 ubiquitin-protein ligase RBX1

1

0

High-throughput

0.458

High

601618

UBC9
SUMO-conjugating enzyme UBC9

1

0

Small-scale

0.458

High

601622

GTF2I
General transcription factor II-I

1

0

High-throughput

0.458

High

601625

SARNP
SAP domain-containing ribonucleoprotein

1

0

High-throughput

0.458

High

601626

RL24
Large ribosomal subunit protein eL24

1

0

High-throughput

0.458

High

601629

FKBP3
Peptidyl-prolyl cis-trans isomerase FKBP3

1

0

High-throughput

0.458

High

601631

SET
Protein SET

1

0

Small-scale

0.458

High

601649

REST
RE1-silencing transcription factor

1

0

High-throughput

0.458

High

601654

G3BP1
Ras GTPase-activating protein-binding protein 1

1

0

High-throughput

0.458

High

601667

ICT1
Large ribosomal subunit protein mL62

1

0

High-throughput

0.458

High

601669

HIC1
Hypermethylated in cancer 1 protein

1

0

Small-scale

0.458

High

601682

U5S1
116 kDa U5 small nuclear ribonucleoprotein component

1

0

High-throughput

0.458

High

601683

KIF14
Kinesin-like protein KIF14

1

0

High-throughput

0.458

High

601696

E2F4
Transcription factor E2F4

1

0

High-throughput

0.458

High

601732

JMJD6
Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6

1

0

Small-scale

0.458

High

601746

DPPA4
Developmental pluripotency-associated protein 4

1

0

High-throughput

0.458

High

601749

SLN11
Schlafen family member 11

1

0

High-throughput

0.458

High

601762

SMC5
Structural maintenance of chromosomes protein 5

1

0

High-throughput

0.458

High

601765

CMTR1
Cap-specific mRNA

1

0

High-throughput

0.458

High

601768

CGAS
Cyclic GMP-AMP synthase

1

0

Small-scale

0.458

High

601779

DOT1L
Histone-lysine N-methyltransferase, H3 lysine-79 specific

1

0

High-throughput

0.458

High

601803

DCPS
m7GpppX diphosphatase

1

0

High-throughput

0.458

High

601826

PARK7
Parkinson disease protein 7

1

0

High-throughput

0.458

High

601842

DDA1
DET1- and DDB1-associated protein 1

1

0

High-throughput

0.458

High

601845

FACD2
Fanconi anemia group D2 protein

1

0

High-throughput

0.458

High

601849

UBE2O
(E3-independent) E2 ubiquitin-conjugating enzyme

1

0

High-throughput

0.458

High

601855

CHM4B
Charged multivesicular body protein 4b

1

0

High-throughput

0.458

High

601866

PRD16
Histone-lysine N-methyltransferase PRDM16

1

0

High-throughput

0.458

High

601870

ANLN
Anillin

1

0

High-throughput

0.458

High

601893

ZRAN1
Ubiquitin thioesterase ZRANB1

1

0

High-throughput

0.458

High

601915

RM11
Large ribosomal subunit protein uL11m

1

0

High-throughput

0.458

High

601916

ZN330
Zinc finger protein 330

1

0

High-throughput

0.458

High

601919

LSM4
U6 snRNA-associated Sm-like protein LSm4

1

0

High-throughput

0.458

High

601923

RBM8A
RNA-binding protein 8A

1

0

High-throughput

0.458

High

61897

GTPBA
GTP-binding protein 10

1

1

High-throughput

0.445

High

182240

WDR46
WD repeat-containing protein 46

1

1

High-throughput

0.445

High

326399

ZN202
Zinc finger protein 202

1

1

High-throughput

0.445

High

342099

BRD1
Bromodomain-containing protein 1

1

4

High-throughput

0.445

High

529021

TAU
Microtubule-associated protein tau

1

3

High-throughput

0.445

High

601635

KIF23
Kinesin-like protein KIF23

1

1

High-throughput

0.445

High

601640

CENPC
Centromere protein C

1

1

High-throughput

0.445

High

601652

DDX10
Probable ATP-dependent RNA helicase DDX10

1

2

High-throughput

0.445

High

601671

TRIPC
E3 ubiquitin-protein ligase TRIP12

1

1

High-throughput

0.445

High

601684

WDR43
WD repeat-containing protein 43

1

2

High-throughput

0.445

High

601692

TRBP2
RISC-loading complex subunit TARBP2

1

1

High-throughput

0.445

High

601706

GLYR1
Cytokine-like nuclear factor N-PAC

1

1

High-throughput

0.445

High

601708

GLE1
mRNA export factor GLE1

1

1

High-throughput

0.445

High

601710

NOM1
Nucleolar MIF4G domain-containing protein 1

1

2

High-throughput

0.445

High

601719

RSBN1
Lysine-specific demethylase 9

1

1

High-throughput

0.445

High

601723

SPT2
Protein SPT2 homolog

1

2

High-throughput

0.445

High

601733

RSBNL
Lysine-specific demethylase RSBN1L

1

1

High-throughput

0.445

High

601761

PHC2
Polyhomeotic-like protein 2

1

2

High-throughput

0.445

High

601763

DHX37
Probable ATP-dependent RNA helicase DHX37

1

1

High-throughput

0.445

High

601769

DDX51
ATP-dependent RNA helicase DDX51

1

3

High-throughput

0.445

High

601775

NGDN
Neuroguidin

1

1

High-throughput

0.445

High

601777

DDX55
ATP-dependent RNA helicase DDX55

1

2

High-throughput

0.445

High

601782

BBX
HMG box transcription factor BBX

1

2

High-throughput

0.445

High

601836

BUD13
BUD13 homolog

1

3

High-throughput

0.445

High

601839

TRI56
E3 ubiquitin-protein ligase TRIM56

1

1

High-throughput

0.445

High

601850

REXO4
RNA exonuclease 4

1

1

High-throughput

0.445

High

601852

HIPK2
Homeodomain-interacting protein kinase 2

1

2

Small-scale

0.445

High

601860

DDX31
ATP-dependent DNA helicase DDX31

1

2

High-throughput

0.445

High

601862

WDR76
WD repeat-containing protein 76

1

2

High-throughput

0.445

High

601863

UBP42
Ubiquitin carboxyl-terminal hydrolase 42

1

1

High-throughput

0.445

High

601871

SAS10
Something about silencing protein 10

1

1

High-throughput

0.445

High

601888

UBP36
Ubiquitin carboxyl-terminal hydrolase 36

1

1

High-throughput

0.445

High

601906

WDR3
WD repeat-containing protein 3

1

1

High-throughput

0.445

High

601920

UTP18
U3 small nucleolar RNA-associated protein 18 homolog

1

1

High-throughput

0.445

High

476425

IBP1
Insulin-like growth factor-binding protein 1

1

1

Small-scale

0.437

High

601664

TRI29
Tripartite motif-containing protein 29

1

1

Small-scale

0.437

High

601704

CCD57
Coiled-coil domain-containing protein 57

1

1

Small-scale

0.437

High

134235

RPOM
DNA-directed RNA polymerase, mitochondrial

1

0

High-throughput

0.426

High

138368

ZN593
Zinc finger protein 593

1

0

High-throughput

0.426

High

140538

MPP10
U3 small nucleolar ribonucleoprotein protein MPP10

1

0

High-throughput

0.426

High

208174

RRP8
Ribosomal RNA-processing protein 8

1

0

High-throughput

0.426

High

244311

NPA1P
Nucleolar pre-ribosomal-associated protein 1

1

0

High-throughput

0.426

High

297924

SPF27
Pre-mRNA-splicing factor SPF27

1

0

High-throughput

0.426

High

601607

RRP1
Ribosomal RNA processing protein 1 homolog A

1

0

High-throughput

0.426

High

601661

NOG2
Nucleolar GTP-binding protein 2

1

0

High-throughput

0.426

High

601688

TTF1
Transcription termination factor 1

1

0

High-throughput

0.426

High

601691

DLGP5
Disks large-associated protein 5

1

0

High-throughput

0.426

High

601702

KNOP1
Lysine-rich nucleolar protein 1

1

0

High-throughput

0.426

High

601703

TSR1
Pre-rRNA-processing protein TSR1 homolog

1

0

High-throughput

0.426

High

601712

TDIF2
Deoxynucleotidyltransferase terminal-interacting protein 2

1

0

High-throughput

0.426

High

601715

SPOUT
28S rRNA

1

0

High-throughput

0.426

High

601730

NEPRO
Nucleolus and neural progenitor protein

1

0

High-throughput

0.426

High

601736

CC137
Coiled-coil domain-containing protein 137

1

0

High-throughput

0.426

High

601744

CENPU
Centromere protein U

1

0

High-throughput

0.426

High

601745

NOL8
Nucleolar protein 8

1

0

High-throughput

0.426

High

601755

SPAS2
Spermatogenesis-associated serine-rich protein 2

1

0

High-throughput

0.426

High

601757

RIOX2
Ribosomal oxygenase 2

1

0

High-throughput

0.426

High

601759

ERI1
3'-5' exoribonuclease 1

1

0

High-throughput

0.426

High

601774

PAPD5
Terminal nucleotidyltransferase 4B

1

0

High-throughput

0.426

High

601805

IMP4
U3 small nucleolar ribonucleoprotein protein IMP4

1

0

High-throughput

0.426

High

601806

PRR11
Proline-rich protein 11

1

0

High-throughput

0.426

High

601814

MUS81
Structure-specific endonuclease subunit MUS81

1

0

High-throughput

0.426

High

601815

F111A
Serine protease FAM111A

1

0

High-throughput

0.426

High

601816

TEFM
Transcription elongation factor, mitochondrial

1

0

High-throughput

0.426

High

601837

UTP23
rRNA-processing protein UTP23 homolog

1

0

High-throughput

0.426

High

601844

NUSAP
Nucleolar and spindle-associated protein 1

1

0

High-throughput

0.426

High

601848

ZDHC5
Palmitoyltransferase ZDHHC5

1

0

High-throughput

0.426

High

601856

ESF1
ESF1 homolog

1

0

High-throughput

0.426

High

601858

DHX33
ATP-dependent RNA helicase DHX33

1

0

High-throughput

0.426

High

601859

NOL6
Nucleolar protein 6

1

0

High-throughput

0.426

High

601880

DDX28
Probable ATP-dependent RNA helicase DDX28

1

0

High-throughput

0.426

High

601881

SDA1
Protein SDA1 homolog

1

0

High-throughput

0.426

High

601883

LYAR
Cell growth-regulating nucleolar protein

1

0

High-throughput

0.426

High

601884

TEX10
Testis-expressed protein 10

1

0

High-throughput

0.426

High

601886

TAP26
Thyroid transcription factor 1-associated protein 26

1

0

High-throughput

0.426

High

601899

TRM6
tRNA

1

0

High-throughput

0.426

High

601904

ABT1
Activator of basal transcription 1

1

0

High-throughput

0.426

High

601905

UTP16
U3 small nucleolar RNA-associated protein NOL7

1

0

High-throughput

0.426

High

601908

SMAG1
Protein Smaug homolog 1

1

0

High-throughput

0.426

High

601912

DDX52
Probable ATP-dependent RNA helicase DDX52

1

0

High-throughput

0.426

High

601914

RRP7A
Ribosomal RNA-processing protein 7 homolog A

1

0

High-throughput

0.426

High

601594

CEBPA
CCAAT/enhancer-binding protein alpha

1

3

High-throughput

0.408

High

601553

VCAM1
Vascular cell adhesion protein 1

1

2

High-throughput

0.407

High

601846

ACE2
Angiotensin-converting enzyme 2

2

0

High-throughput

0.305

High

601685

PDK1
[Pyruvate dehydrogenase

1

0

High-throughput

0.279

Low

352933

AGR2
Anterior gradient protein 2 homolog

1

0

High-throughput

0.269

Low

601560

CD72
B-cell differentiation antigen CD72

1

0

High-throughput

0.269

Low

601582

ARRC
Arrestin-C

1

0

High-throughput

0.269

Low

601645

ABCC8
ATP-binding cassette sub-family C member 8

1

0

High-throughput

0.269

Low

601705

MST1L
Putative macrophage stimulating 1-like protein

1

0

High-throughput

0.269

Low

601716

CAMP1
Calmodulin-regulated spectrin-associated protein 1

1

0

High-throughput

0.269

Low

601717

CODA1
Collagen alpha-1(XIII) chain

1

0

High-throughput

0.269

Low

601726

BLT3A
Bridge-like lipid transfer protein family member 3A

1

0

High-throughput

0.269

Low

601750

ADCK1
AarF domain-containing protein kinase 1

1

0

High-throughput

0.269

Low

601764

CFA46
Cilia- and flagella-associated protein 46

1

0

High-throughput

0.269

Low

601770

CNBD1
Cyclic nucleotide-binding domain-containing protein 1

1

0

High-throughput

0.269

Low

601772

RN214
RING finger protein 214

1

0

High-throughput

0.269

Low

601818

PANX2
Pannexin-2

1

0

High-throughput

0.269

Low

601878

KCND1
A-type voltage-gated potassium channel KCND1

1

0

High-throughput

0.269

Low

601889

UNC79
Protein unc-79 homolog

1

0

High-throughput

0.269

Low

378606

IL2RA
Interleukin-2 receptor subunit alpha

1

0

Small-scale

0.249

Low

590785

TIMP2
Metalloproteinase inhibitor 2

1

0

High-throughput

0.249

Low

601740

S2548
Solute carrier family 25 member 48

1

0

High-throughput

0.249

Low

601741

TRI67
Tripartite motif-containing protein 67

1

0

High-throughput

0.249

Low

601758

CCD71
Coiled-coil domain-containing protein 71

1

0

Small-scale

0.249

Low

601776

TRI58
E3 ubiquitin-protein ligase TRIM58

1

0

Small-scale

0.249

Low

601838

PXL2A
Peroxiredoxin-like 2A

1

0

High-throughput

0.249

Low

601853

MTRFR
Mitochondrial translation release factor in rescue

1

0

High-throughput

0.249

Low

601892

ABCF2
ATP-binding cassette sub-family F member 2

1

0

High-throughput

0.249

Low

601665

URB2
Unhealthy ribosome biogenesis protein 2 homolog

1

0

High-throughput

0.232

Low

601711

DDX6L
Probable ATP-dependent RNA helicase DDX60-like

1

0

High-throughput

0.232

Low

601767

SRBD1
S1 RNA-binding domain-containing protein 1

1

0

High-throughput

0.232

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025