Protein: RL13
Large ribosomal subunit protein uL13 (50S ribosomal protein L13)

Gene: RL13, rplM
Organism: Escherichia coli K-12
Interactions: 142
UniProt ID: P0AA10

Gene Ontology (top 5):
GO:0002181 - cytoplasmic translation
GO:0003729 - mRNA binding
GO:0003735 - structural constituent of ribosome
GO:0005737 - cytoplasm
GO:0005829 - cytosol

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

465560

MUKB
Chromosome partition protein MukB

2

2

High-throughput

0.601

High

465585

YDCY
Uncharacterized protein YdcY

2

0

High-throughput

0.588

High

393739

PNP
Polyribonucleotide nucleotidyltransferase

2

2

High-throughput

0.588

High

415757

TOP1
DNA topoisomerase 1

2

1

High-throughput

0.588

High

463526

RHLB
ATP-dependent RNA helicase RhlB

2

4

High-throughput

0.588

High

464936

LON
Lon protease

2

1

High-throughput

0.588

High

465526

CLPA
ATP-dependent Clp protease ATP-binding subunit ClpA

2

4

High-throughput

0.588

High

465551

SELB
Selenocysteine-specific elongation factor

2

3

High-throughput

0.588

High

465566

AIDB
Putative acyl-CoA dehydrogenase AidB

2

1

High-throughput

0.588

High

465577

RL4
Large ribosomal subunit protein uL4

2

2

High-throughput

0.588

High

465581

RLMB
23S rRNA

2

3

High-throughput

0.588

High

462833

SSRP
SsrA-binding protein

2

0

High-throughput

0.576

High

465550

DPO3A
DNA polymerase III subunit alpha

2

0

High-throughput

0.576

High

336965

PHSM
Maltodextrin phosphorylase

2

0

High-throughput

0.563

High

343884

SYGA
Glycine--tRNA ligase alpha subunit

2

0

High-throughput

0.563

High

458922

HFQ
RNA-binding protein Hfq

2

0

High-throughput

0.563

High

465522

YBCJ
Putative RNA-binding protein YbcJ

2

0

High-throughput

0.563

High

465535

YIBL
Uncharacterized protein YibL

2

0

High-throughput

0.563

High

465538

RL23
Large ribosomal subunit protein uL23

2

0

High-throughput

0.563

High

465544

SPOT
Bifunctional

2

0

High-throughput

0.563

High

465546

YHBY
RNA-binding protein YhbY

2

0

High-throughput

0.563

High

465554

ICLR
Transcriptional repressor IclR

2

0

High-throughput

0.563

High

465558

RNE
Ribonuclease E

2

0

High-throughput

0.563

High

465603

YAJL
Protein/nucleic acid deglycase 3

2

0

Small-scale

0.547

High

358378

RL15
Large ribosomal subunit protein uL15

1

3

High-throughput

0.536

High

460637

RL19
Large ribosomal subunit protein bL19

1

2

High-throughput

0.536

High

461190

RL9
Large ribosomal subunit protein bL9

1

2

High-throughput

0.536

High

461418

RS13
Small ribosomal subunit protein uS13

1

1

High-throughput

0.536

High

461925

RS3
Small ribosomal subunit protein uS3

1

2

High-throughput

0.536

High

462306

RS5
Small ribosomal subunit protein uS5

1

2

High-throughput

0.536

High

462470

RS9
Small ribosomal subunit protein uS9

1

2

High-throughput

0.536

High

465537

RL14
Large ribosomal subunit protein uL14

1

3

High-throughput

0.536

High

465545

RL17
Large ribosomal subunit protein bL17

1

3

High-throughput

0.536

High

465576

RL2
Large ribosomal subunit protein uL2

1

6

High-throughput

0.536

High

343725

SYW
Tryptophan--tRNA ligase

1

1

High-throughput

0.484

High

368605

DPO3E
DNA polymerase III subunit epsilon

1

1

High-throughput

0.484

High

368642

UVRD
DNA helicase II

1

3

High-throughput

0.484

High

459006

IHFB
Integration host factor subunit beta

1

1

High-throughput

0.484

High

459471

IF2
Translation initiation factor IF-2

1

7

High-throughput

0.484

High

459785

LPXA
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase

1

1

High-throughput

0.484

High

459858

MURA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase

1

1

High-throughput

0.484

High

460114

IPYR
Inorganic pyrophosphatase

1

2

High-throughput

0.484

High

463569

SYT
Threonine--tRNA ligase

1

2

High-throughput

0.484

High

463850

RPOC
DNA-directed RNA polymerase subunit beta'

1

1

High-throughput

0.484

High

464299

CSPD
Cold shock-like protein CspD

1

6

High-throughput

0.484

High

464359

CSPG
Cold shock-like protein CspG

1

6

High-throughput

0.484

High

465121

DEAD
ATP-dependent RNA helicase DeaD

1

5

High-throughput

0.484

High

465316

ULAR
HTH-type transcriptional regulator UlaR

1

1

High-throughput

0.484

High

465445

CSPC
Cold shock-like protein CspC

1

6

High-throughput

0.484

High

465521

RLUC
Ribosomal large subunit pseudouridine synthase C

1

3

High-throughput

0.484

High

465539

MAP1
Methionine aminopeptidase

1

4

High-throughput

0.484

High

465557

RNR
Ribonuclease R

1

3

High-throughput

0.484

High

465559

LPXD
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase

1

1

High-throughput

0.484

High

465563

MNME
tRNA modification GTPase MnmE

1

5

High-throughput

0.484

High

465571

RLUB
Ribosomal large subunit pseudouridine synthase B

1

3

High-throughput

0.484

High

465578

LEPA
Elongation factor 4

1

3

High-throughput

0.484

High

465583

CLPB
Chaperone protein ClpB

1

5

High-throughput

0.484

High

465575

YHHX
Uncharacterized oxidoreductase YhhX

1

0

High-throughput

0.479

High

465588

YQJI
Transcriptional regulator YqjI

1

0

High-throughput

0.479

High

465596

DCYD
D-cysteine desulfhydrase

1

0

High-throughput

0.479

High

465531

DBHA
DNA-binding protein HU-alpha

1

1

High-throughput

0.479

High

340916

DPO1
DNA polymerase I

1

0

High-throughput

0.464

High

458299

CLPP
ATP-dependent Clp protease proteolytic subunit

1

0

High-throughput

0.464

High

458384

HSLU
ATP-dependent protease ATPase subunit HslU

1

0

High-throughput

0.464

High

458717

FABZ
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ

1

0

High-throughput

0.464

High

458750

FIS
DNA-binding protein Fis

1

0

High-throughput

0.464

High

458822

RSMG
Ribosomal RNA small subunit methyltransferase G

1

0

High-throughput

0.464

High

458856

GREA
Transcription elongation factor GreA

1

0

High-throughput

0.464

High

459535

IF3
Translation initiation factor IF-3 [Cleaved into: Translation initiation factor IF-3, N-terminally processed; Translation initiation factor IF-3S]

1

0

High-throughput

0.464

High

459588

KDSA
2-dehydro-3-deoxyphosphooctonate aldolase

1

0

High-throughput

0.464

High

459977

RPPH
RNA pyrophosphohydrolase

1

0

High-throughput

0.464

High

460014

NUSB
Transcription antitermination protein NusB

1

0

High-throughput

0.464

High

460215

PTH
Peptidyl-tRNA hydrolase

1

0

High-throughput

0.464

High

460275

PYRH
Uridylate kinase

1

0

High-throughput

0.464

High

462649

RPOA
DNA-directed RNA polymerase subunit alpha

1

0

High-throughput

0.464

High

462930

TGT
Queuine tRNA-ribosyltransferase

1

0

High-throughput

0.464

High

463399

UVRC
UvrABC system protein C

1

0

High-throughput

0.464

High

464764

PHOL
PhoH-like protein

1

0

High-throughput

0.464

High

464912

PPIC
Peptidyl-prolyl cis-trans isomerase C

1

0

High-throughput

0.464

High

465527

DYR
Dihydrofolate reductase

1

0

High-throughput

0.464

High

465532

HSLR
Heat shock protein 15

1

0

High-throughput

0.464

High

465541

FUCM
L-fucose mutarotase

1

0

High-throughput

0.464

High

465542

SKP
Chaperone protein Skp

1

0

High-throughput

0.464

High

465543

PARC
DNA topoisomerase 4 subunit A

1

0

High-throughput

0.464

High

465547

RCSB
Transcriptional regulatory protein RcsB

1

0

High-throughput

0.464

High

465549

LPXB
Lipid-A-disaccharide synthase

1

0

High-throughput

0.464

High

465561

ISPA
Farnesyl diphosphate synthase

1

0

High-throughput

0.464

High

465565

GLMM
Phosphoglucosamine mutase

1

0

High-throughput

0.464

High

465569

RLMN
Dual-specificity RNA methyltransferase RlmN

1

0

High-throughput

0.464

High

465572

RSGA
Small ribosomal subunit biogenesis GTPase RsgA

1

0

High-throughput

0.464

High

465580

RISB
6,7-dimethyl-8-ribityllumazine synthase

1

0

High-throughput

0.464

High

465590

GNGF
Putative gluconeogenesis factor

1

0

High-throughput

0.464

High

429396

FDHF
Formate dehydrogenase H

1

0

High-throughput

0.458

High

463604

YEEX
UPF0265 protein YeeX

1

0

High-throughput

0.458

High

464013

YFBU
UPF0304 protein YfbU

1

0

High-throughput

0.458

High

465525

PCNB
Poly(A) polymerase I

1

0

High-throughput

0.458

High

465529

KDSC
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC

1

0

High-throughput

0.458

High

465533

KPYK1
Pyruvate kinase I

1

0

High-throughput

0.458

High

465582

GMHBB
D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase

1

0

High-throughput

0.458

High

465589

CSRA
Carbon storage regulator

1

0

High-throughput

0.458

High

465592

RLMI
Ribosomal RNA large subunit methyltransferase I

1

0

High-throughput

0.458

High

465597

5DNU
5'-deoxynucleotidase YfbR

1

0

High-throughput

0.458

High

465600

YDJL
Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjL

1

0

High-throughput

0.458

High

465602

MENI
1,4-dihydroxy-2-naphthoyl-CoA hydrolase

1

0

High-throughput

0.458

High

436657

ILVB
Acetolactate synthase isozyme 1 large subunit

1

1

High-throughput

0.442

High

465552

TOP3
DNA topoisomerase 3

1

1

High-throughput

0.442

High

465553

SRLR
Glucitol operon repressor

1

1

High-throughput

0.442

High

459654

KPRS
Ribose-phosphate pyrophosphokinase

1

0

High-throughput

0.426

High

462970

TIG
Trigger factor

1

0

Small-scale

0.426

High

465540

DCM
DNA-cytosine methyltransferase

2

0

High-throughput

0.313

High

465599

LYSAC
Peptidyl-lysine N-acetyltransferase PatZ

2

0

High-throughput

0.313

High

462606

RNPA
Ribonuclease P protein component

2

0

High-throughput

0.307

High

463314

YACL
UPF0231 protein YacL

2

0

High-throughput

0.307

High

463480

TRMB
tRNA

2

0

High-throughput

0.307

High

465534

FIMB
Type 1 fimbriae regulatory protein FimB

2

0

High-throughput

0.307

High

465574

YRAN
UPF0102 protein YraN

2

0

High-throughput

0.307

High

465579

LOLA
Outer-membrane lipoprotein carrier protein

2

0

High-throughput

0.307

High

465591

YBJX
Uncharacterized protein YbjX

2

0

High-throughput

0.307

High

465593

PAAX
Transcriptional repressor PaaX

2

0

High-throughput

0.307

High

465523

YCGL
Protein YcgL

1

0

High-throughput

0.279

Low

465587

YEET
Uncharacterized protein YeeT

1

0

High-throughput

0.279

Low

465528

EXBB
Biopolymer transport protein ExbB

1

0

High-throughput

0.261

Low

465536

YGGE
Uncharacterized protein YggE

1

0

High-throughput

0.261

Low

465570

WBBK
Putative glycosyltransferase WbbK

1

0

High-throughput

0.261

Low

465584

YDCL
Uncharacterized lipoprotein YdcL

1

0

High-throughput

0.261

Low

465586

YODC
Uncharacterized protein YodC

1

0

High-throughput

0.261

Low

465598

YFFL
Uncharacterized protein YffL

1

0

High-throughput

0.261

Low

460082

PLSB
Glycerol-3-phosphate acyltransferase

1

0

High-throughput

0.253

Low

465530

KDTA
3-deoxy-D-manno-octulosonic acid transferase

1

0

High-throughput

0.253

Low

465548

RCSA
Transcriptional regulatory protein RcsA

1

0

High-throughput

0.253

Low

465555

MURG
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase

1

0

High-throughput

0.253

Low

465562

RP54
RNA polymerase sigma-54 factor

1

0

High-throughput

0.253

Low

465564

HOLD
DNA polymerase III subunit psi

1

0

High-throughput

0.253

Low

465567

DUSC
tRNA-dihydrouridine(16) synthase

1

0

High-throughput

0.253

Low

367468

TONB
Protein TonB

1

0

High-throughput

0.249

Low

465524

ATPG
ATP synthase gamma chain

1

0

High-throughput

0.249

Low

465556

HYAE
Hydrogenase-1 operon protein HyaE

1

0

High-throughput

0.249

Low

465568

YADG
Uncharacterized ABC transporter ATP-binding protein YadG

1

0

High-throughput

0.249

Low

465573

YJJU
Uncharacterized protein YjjU

1

0

High-throughput

0.249

Low

465594

YNCE
Uncharacterized protein YncE

1

0

High-throughput

0.249

Low

465595

YEAO
Uncharacterized protein YeaO

1

0

High-throughput

0.249

Low

465601

YBAY
Uncharacterized lipoprotein YbaY

1

0

High-throughput

0.249

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024