Protein: DBHA
DNA-binding protein HU-alpha (HU-2) (NS2)

Gene: DBHA, hupA
Organism: Escherichia coli K-12
Interactions: 112
UniProt ID: P0ACF0

Gene Ontology (top 5):
GO:0003677 - DNA binding
GO:0005829 - cytosol
GO:0006270 - DNA replication initiation
GO:0006281 - DNA repair
GO:0006351 - DNA-templated transcription

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

467093

DBHB
DNA-binding protein HU-beta

4

13

Small-scale

0.909

High

467092

DBHA
DNA-binding protein HU-alpha

1

13

Small-scale

0.692

High

368571

DNAA
Chromosomal replication initiator protein DnaA

3

0

Small-scale

0.627

High

459008

IHFB
Integration host factor subunit beta

1

13

High-throughput

0.625

High

459114

DNAK
Chaperone protein DnaK

2

2

High-throughput

0.612

High

463375

UVRB
UvrABC system protein B

2

3

High-throughput

0.588

High

463859

RPOC
DNA-directed RNA polymerase subunit beta'

2

1

High-throughput

0.588

High

464329

CSPE
Cold shock-like protein CspE

2

5

High-throughput

0.588

High

464808

SLYD
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD

2

2

High-throughput

0.588

High

465425

CSPA
Cold shock protein CspA

2

5

High-throughput

0.588

High

465452

CSPC
Cold shock-like protein CspC

2

5

High-throughput

0.588

High

465663

RLUC
Ribosomal large subunit pseudouridine synthase C

2

4

High-throughput

0.588

High

466029

YBCJ
Putative RNA-binding protein YbcJ

2

2

High-throughput

0.588

High

467094

HNS
DNA-binding protein H-NS

2

1

High-throughput

0.588

High

467096

ALLR
HTH-type transcriptional repressor AllR

2

2

High-throughput

0.588

High

467109

YFIF
Uncharacterized tRNA/rRNA methyltransferase YfiF

2

1

High-throughput

0.588

High

467112

TOP3
DNA topoisomerase 3

2

2

High-throughput

0.588

High

467118

RNR
Ribonuclease R

2

1

High-throughput

0.588

High

467138

NFI
Endonuclease V

2

3

High-throughput

0.588

High

467141

YBJX
Uncharacterized protein YbjX

2

1

High-throughput

0.588

High

463401

UVRC
UvrABC system protein C

2

0

High-throughput

0.576

High

404424

T1SK
Type I restriction enzyme EcoKI specificity subunit

2

1

High-throughput

0.571

High

467101

FKBX
FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase

2

2

High-throughput

0.571

High

393742

PNP
Polyribonucleotide nucleotidyltransferase

2

0

High-throughput

0.563

High

459590

KDSA
2-dehydro-3-deoxyphosphooctonate aldolase

2

0

High-throughput

0.563

High

463945

RPOB
DNA-directed RNA polymerase subunit beta

2

0

High-throughput

0.563

High

467107

SPOT
Bifunctional

2

0

High-throughput

0.563

High

459980

RPPH
RNA pyrophosphohydrolase

2

1

High-throughput

0.537

High

462115

RS4
Small ribosomal subunit protein uS4

1

3

High-throughput

0.536

High

467134

RL2
Large ribosomal subunit protein uL2

1

2

High-throughput

0.536

High

467135

RL4
Large ribosomal subunit protein uL4

1

1

High-throughput

0.536

High

427795

CHEA
Chemotaxis protein CheA

1

0

High-throughput

0.513

High

467115

PHNN
Ribose 1,5-bisphosphate phosphokinase PhnN

1

0

High-throughput

0.513

High

467142

BLUR
HTH-type transcriptional repressor BluR

1

0

High-throughput

0.513

High

367428

PBPB
Penicillin-binding protein 1B

1

2

High-throughput

0.500

High

466683

EXBB
Biopolymer transport protein ExbB

1

1

High-throughput

0.500

High

467095

ROB
Right origin-binding protein

1

2

High-throughput

0.500

High

358385

RL15
Large ribosomal subunit protein uL15

1

1

High-throughput

0.489

High

336967

PHSM
Maltodextrin phosphorylase

1

1

High-throughput

0.484

High

340917

DPO1
DNA polymerase I

1

1

High-throughput

0.484

High

368646

UVRD
DNA helicase II

1

2

High-throughput

0.484

High

415761

TOP1
DNA topoisomerase 1

1

2

High-throughput

0.484

High

421182

RF2
Peptide chain release factor RF2

1

1

High-throughput

0.484

High

458751

FIS
DNA-binding protein Fis

1

1

High-throughput

0.484

High

458925

HFQ
RNA-binding protein Hfq

1

1

High-throughput

0.484

High

460280

PYRH
Uridylate kinase

1

1

High-throughput

0.484

High

462655

RPOA
DNA-directed RNA polymerase subunit alpha

1

1

High-throughput

0.484

High

462836

SSRP
SsrA-binding protein

1

1

High-throughput

0.484

High

462931

TGT
Queuine tRNA-ribosyltransferase

1

1

High-throughput

0.484

High

464304

CSPD
Cold shock-like protein CspD

1

5

High-throughput

0.484

High

465126

DEAD
ATP-dependent RNA helicase DeaD

1

3

High-throughput

0.484

High

467113

SRLR
Glucitol operon repressor

1

2

High-throughput

0.484

High

467114

MALQ
4-alpha-glucanotransferase

1

1

High-throughput

0.484

High

467120

MNME
tRNA modification GTPase MnmE

1

1

High-throughput

0.484

High

467130

RLUB
Ribosomal large subunit pseudouridine synthase B

1

4

High-throughput

0.484

High

467119

MAK
Fructokinase

1

0

High-throughput

0.479

High

467122

OTSA
Trehalose-6-phosphate synthase

1

0

High-throughput

0.479

High

467136

YPFJ
Uncharacterized protein YpfJ

1

0

High-throughput

0.479

High

467137

YQJI
Transcriptional regulator YqjI

1

0

High-throughput

0.479

High

460315

QUEA
S-adenosylmethionine:tRNA ribosyltransferase-isomerase

1

1

High-throughput

0.479

High

463607

YEEX
UPF0265 protein YeeX

1

2

High-throughput

0.479

High

464921

P5CR
Pyrroline-5-carboxylate reductase

1

1

High-throughput

0.479

High

465531

RL13
Large ribosomal subunit protein uL13

1

1

High-throughput

0.479

High

467013

HEM2
Delta-aminolevulinic acid dehydratase

1

1

High-throughput

0.479

High

467098

KPYK1
Pyruvate kinase I

1

1

High-throughput

0.479

High

467110

ISCR
HTH-type transcriptional regulator IscR

1

2

High-throughput

0.479

High

467139

CSRA
Carbon storage regulator

1

1

High-throughput

0.479

High

467143

YNCE
Uncharacterized protein YncE

1

1

High-throughput

0.479

High

467144

KDGR
HTH-type transcriptional regulator KdgR

1

2

High-throughput

0.479

High

458690

FABA
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase

1

0

High-throughput

0.464

High

464767

PHOL
PhoH-like protein

1

0

High-throughput

0.464

High

467105

ATL
DNA base-flipping protein

1

0

High-throughput

0.464

High

467111

RCSA
Transcriptional regulatory protein RcsA

1

0

High-throughput

0.464

High

467126

RLMN
Dual-specificity RNA methyltransferase RlmN

1

0

High-throughput

0.464

High

452028

PUTA
Bifunctional protein PutA [Includes: Proline dehydrogenase

1

0

High-throughput

0.458

High

458789

GPDA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]

1

0

High-throughput

0.458

High

464015

YFBU
UPF0304 protein YfbU

1

0

High-throughput

0.458

High

464101

BLC
Outer membrane lipoprotein Blc

1

0

High-throughput

0.458

High

467102

GLNP
Glutamine transport system permease protein GlnP

1

0

High-throughput

0.458

High

467116

CIRA
Colicin I receptor

1

0

High-throughput

0.458

High

467125

NIKB
Nickel transport system permease protein NikB

1

0

High-throughput

0.458

High

467127

ZNTA
Zinc/cadmium/lead-transporting P-type ATPase

1

0

High-throughput

0.458

High

467133

YJJU
Uncharacterized protein YjjU

1

0

High-throughput

0.458

High

467106

YBBO
Uncharacterized oxidoreductase YbbO

1

2

High-throughput

0.457

High

367379

PBPA
Penicillin-binding protein 1A

1

2

High-throughput

0.437

High

404179

APAH
Bis(5'-nucleosyl)-tetraphosphatase [symmetrical]

1

1

High-throughput

0.437

High

467100

RL23
Large ribosomal subunit protein uL23

1

1

High-throughput

0.437

High

467131

AG43
Antigen 43

1

1

High-throughput

0.437

High

467140

RLMF
Ribosomal RNA large subunit methyltransferase F

1

1

High-throughput

0.437

High

467108

SSB
Single-stranded DNA-binding protein

1

0

High-throughput

0.426

High

467123

INTA
Prophage integrase IntA

1

0

High-throughput

0.426

High

462609

RNPA
Ribonuclease P protein component

2

0

High-throughput

0.313

High

462592

RNH
Ribonuclease HI

2

0

High-throughput

0.307

High

439016

YCIH
Uncharacterized protein YciH

1

0

High-throughput

0.279

Low

459941

NRDI
Protein NrdI

1

0

High-throughput

0.279

Low

467146

OMPL
Porin OmpL

1

0

High-throughput

0.279

Low

467103

YJDI
Uncharacterized protein YjdI

1

0

High-throughput

0.269

Low

467117

MURG
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase

1

0

High-throughput

0.253

Low

467121

RIBD
Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase

1

0

High-throughput

0.253

Low

467124

DUSC
tRNA-dihydrouridine(16) synthase

1

0

High-throughput

0.253

Low

463803

YCJF
UPF0283 membrane protein YcjF

1

0

High-throughput

0.249

Low

466472

CYOC
Cytochrome bo(3) ubiquinol oxidase subunit 3

1

0

High-throughput

0.249

Low

467097

LAPA
Lipopolysaccharide assembly protein A

1

0

High-throughput

0.249

Low

467099

NLPD
Murein hydrolase activator NlpD

1

0

High-throughput

0.249

Low

467104

OXC
Oxalyl-CoA decarboxylase

1

0

High-throughput

0.249

Low

467128

YHJD
Inner membrane protein YhjD

1

0

High-throughput

0.249

Low

467129

WBBK
Putative glycosyltransferase WbbK

1

0

High-throughput

0.249

Low

467132

YJIN
Uncharacterized protein YjiN

1

0

High-throughput

0.249

Low

467145

5DNU
5'-deoxynucleotidase YfbR

1

0

High-throughput

0.249

Low

467147

ASTC
Succinylornithine transaminase

1

0

High-throughput

0.249

Low

467148

UACF
Putative oxidoreductase UacF

1

0

High-throughput

0.249

Low


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Last updated: 15 Jul 2024