Protein: RRP1
Ribosomal RNA-processing protein 1

Gene: RRP1
Organism: Saccharomyces cerevisiae S288C
Interactions: 136
UniProt ID: P35178

Gene Ontology (top 5):
GO:0005634 - nucleus
GO:0005730 - nucleolus
GO:0006364 - rRNA processing
GO:0030687 - preribosome, large subunit precursor
GO:0030688 - preribosome, small subunit precursor

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

501204

MAK16
Protein MAK16

2

3

Small-scale

0.754

High

715420

RRP1
Ribosomal RNA-processing protein 1

2

2

Small-scale

0.754

High

715454

NOP2
25S rRNA

6

4

Small-scale

0.732

High

715424

RPF2
Ribosome biogenesis protein RPF2

6

1

Small-scale

0.729

High

715444

NOC2
Nucleolar complex protein 2

6

1

Small-scale

0.723

High

715465

PESC
Pescadillo homolog

5

1

Small-scale

0.714

High

715474

NOG1
Nucleolar GTP-binding protein 1

5

4

Small-scale

0.702

High

715436

CIC1
Proteasome-interacting protein CIC1

4

1

Small-scale

0.686

High

715463

NSA1
Ribosome biogenesis protein NSA1

4

2

Small-scale

0.676

High

715477

HAS1
ATP-dependent RNA helicase HAS1

4

8

Small-scale

0.676

High

715497

BRX1
Ribosome biogenesis protein BRX1

3

10

Small-scale

0.656

High

715503

YTM1
Ribosome biogenesis protein YTM1

3

5

Small-scale

0.656

High

715438

RPF1
Ribosome production factor 1

3

3

Small-scale

0.643

High

534939

RL3
Large ribosomal subunit protein uL3

3

2

Small-scale

0.640

High

715437

SSF1
Ribosome biogenesis protein SSF1

3

2

Small-scale

0.640

High

715453

RLP7
Ribosome biogenesis protein RLP7

3

2

Small-scale

0.640

High

715468

NOP15
Ribosome biogenesis protein 15

3

5

Small-scale

0.640

High

715485

RRP5
rRNA biogenesis protein RRP5

3

5

Small-scale

0.640

High

715509

MAK21
Ribosome biogenesis protein MAK21

3

5

Small-scale

0.640

High

715512

IF6
Eukaryotic translation initiation factor 6

3

1

Small-scale

0.640

High

715475

FRK1
Fatty acyl-CoA synthetase and RNA processing-associated kinase 1

2

2

High-throughput

0.619

High

406943

RS3
Small ribosomal subunit protein uS3

2

1

Small-scale

0.584

High

594028

MAK11
Protein MAK11

2

6

Small-scale

0.584

High

638705

SPB4
ATP-dependent rRNA helicase SPB4

2

7

High-throughput

0.584

High

699664

DRS1
ATP-dependent RNA helicase DRS1

2

8

Small-scale

0.584

High

715421

EBP2
rRNA-processing protein EBP2

2

1

Small-scale

0.584

High

715425

NOP4
Nucleolar protein 4

2

4

Small-scale

0.584

High

715447

NSA2
Ribosome biogenesis protein NSA2

2

1

Small-scale

0.584

High

715484

ERB1
Ribosome biogenesis protein ERB1

2

6

Small-scale

0.584

High

715495

RLP24
Ribosome biogenesis protein RLP24

2

1

Small-scale

0.584

High

715502

NIP7
60S ribosome subunit biogenesis protein NIP7

2

1

Small-scale

0.584

High

715504

NOP53
Ribosome biogenesis protein NOP53

2

1

High-throughput

0.584

High

715511

DBP10
ATP-dependent RNA helicase DBP10

2

5

Small-scale

0.584

High

715481

PUF6
Pumilio homology domain family member 6

2

1

Small-scale

0.571

High

715422

RRP14
Ribosomal RNA-processing protein 14

2

0

Small-scale

0.559

High

715445

NOP16
Nucleolar protein 16

2

0

Small-scale

0.559

High

715457

LOC1
60S ribosomal subunit assembly/export protein LOC1

2

0

Small-scale

0.559

High

715491

RRP15
Ribosomal RNA-processing protein 15

2

0

Small-scale

0.559

High

481616

RL18B
Large ribosomal subunit protein eL18B

1

2

High-throughput

0.553

High

584699

CSK22
Casein kinase II subunit alpha'

1

5

High-throughput

0.536

High

675944

XPO1
Exportin-1

1

2

High-throughput

0.536

High

696293

PP12
Serine/threonine-protein phosphatase PP1-2

1

3

High-throughput

0.536

High

715428

HMT1
Protein arginine N-methyltransferase 1

1

1

High-throughput

0.536

High

715462

PRP43
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43

1

2

High-throughput

0.536

High

597123

ACE2
Metallothionein expression activator

1

4

High-throughput

0.515

High

699149

RAD5
DNA repair protein RAD5

1

3

High-throughput

0.515

High

715433

RFC5
Replication factor C subunit 5

1

2

High-throughput

0.515

High

566161

EST1
Telomere elongation protein EST1

1

0

High-throughput

0.513

High

715450

FKH1
Fork head protein homolog 1

1

0

High-throughput

0.513

High

412457

KIN28
Serine/threonine-protein kinase KIN28

1

3

High-throughput

0.501

High

715423

SET3
SET domain-containing protein 3

1

0

High-throughput

0.493

High

715451

YRB2
Ran-specific GTPase-activating protein 2

1

0

High-throughput

0.493

High

715458

BPL1
Biotin--protein ligase

1

0

High-throughput

0.493

High

715459

ROM2
RHO1 GDP-GTP exchange protein 2

1

0

High-throughput

0.493

High

715460

ALAT
Probable alanine aminotransferase

1

0

High-throughput

0.493

High

715483

CSM3
Chromosome segregation in meiosis protein 3

1

0

High-throughput

0.493

High

715490

TFC6
Transcription factor tau 91 kDa subunit

1

0

High-throughput

0.493

High

356389

H4
Histone H4

1

2

High-throughput

0.479

High

357654

RL28
Large ribosomal subunit protein uL15

1

1

Small-scale

0.479

High

383060

RL25
Large ribosomal subunit protein uL23

1

1

Small-scale

0.479

High

405162

RL17A
Large ribosomal subunit protein uL22A

1

1

Small-scale

0.479

High

480024

RS6A
Small ribosomal subunit protein eS6A

1

2

High-throughput

0.479

High

534730

RL30
Large ribosomal subunit protein eL30

1

1

Small-scale

0.479

High

631787

RS2
Small ribosomal subunit protein uS5

1

1

High-throughput

0.479

High

634392

SPB1
27S pre-rRNA

1

3

High-throughput

0.479

High

634547

KRR1
KRR1 small subunit processome component

1

1

High-throughput

0.479

High

640901

RL5
Large ribosomal subunit protein uL18

1

1

Small-scale

0.479

High

650268

SPT5
Transcription elongation factor SPT5

1

1

High-throughput

0.479

High

697372

CHD1
Chromo domain-containing protein 1

1

6

High-throughput

0.479

High

703026

MRT4
Ribosome assembly factor MRT4

1

2

High-throughput

0.479

High

710865

URB1
Nucleolar pre-ribosomal-associated protein 1

1

1

Small-scale

0.479

High

715426

GBLP
Small ribosomal subunit protein RACK1

1

6

High-throughput

0.479

High

715430

MAK5
ATP-dependent RNA helicase MAK5

1

9

High-throughput

0.479

High

715434

ENP1
Essential nuclear protein 1

1

1

High-throughput

0.479

High

715439

FKBP3
Peptidyl-prolyl cis-trans isomerase

1

2

High-throughput

0.479

High

715446

NUG1
Nuclear GTP-binding protein NUG1

1

3

High-throughput

0.479

High

715452

ULP2
Ubiquitin-like-specific protease 2

1

1

High-throughput

0.479

High

715456

UTP10
U3 small nucleolar RNA-associated protein 10

1

1

High-throughput

0.479

High

715466

NOG2
Nucleolar GTP-binding protein 2

1

3

High-throughput

0.479

High

715467

NOP13
Nucleolar protein 13

1

2

High-throughput

0.479

High

715469

APJ1
J domain-containing protein APJ1

1

1

High-throughput

0.479

High

715470

RCM1
25S rRNA

1

4

High-throughput

0.479

High

715472

H3
Histone H3

1

4

High-throughput

0.479

High

715476

TOM1
E3 ubiquitin-protein ligase TOM1

1

2

High-throughput

0.479

High

715479

DHR1
Probable ATP-dependent RNA helicase DHR1

1

2

High-throughput

0.479

High

715480

RRB1
Ribosome assembly protein RRB1

1

3

High-throughput

0.479

High

715482

UTP14
U3 small nucleolar RNA-associated protein 14

1

2

High-throughput

0.479

High

715487

FKBP4
FK506-binding protein 4

1

2

High-throughput

0.479

High

715488

JIP5
WD repeat-containing protein JIP5

1

2

High-throughput

0.479

High

715489

DBP9
ATP-dependent RNA helicase DBP9

1

5

High-throughput

0.479

High

715492

NOC4
Nucleolar complex protein 4

1

5

High-throughput

0.479

High

715494

NOC3
Nucleolar complex-associated protein 3

1

3

High-throughput

0.479

High

715496

NOP12
Nucleolar protein 12

1

7

High-throughput

0.479

High

715498

REXO4
RNA exonuclease 4

1

3

High-throughput

0.479

High

715501

RRS1
Regulator of ribosome biosynthesis

1

1

High-throughput

0.479

High

715507

SSF2
Ribosome biogenesis protein SSF2

1

2

High-throughput

0.479

High

715510

RIO1
Serine/threonine-protein kinase RIO1

1

1

High-throughput

0.479

High

560943

EF3A
Elongation factor 3A

1

2

High-throughput

0.470

High

355436

H2B1
Histone H2B.1

1

0

High-throughput

0.458

High

661852

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.458

High

688188

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

0

High-throughput

0.458

High

715432

YBC8
UPF0642 protein YBL028C

1

0

High-throughput

0.458

High

715471

ORC1
Origin recognition complex subunit 1

1

0

High-throughput

0.458

High

715478

RRP17
Ribosomal RNA-processing protein 17

1

0

High-throughput

0.458

High

715486

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

0

High-throughput

0.458

High

715499

SGO1
Shugoshin

1

0

High-throughput

0.458

High

715505

YL11B
Transposon Ty1-LR1 Gag-Pol polyprotein

1

0

High-throughput

0.458

High

715508

SCC1
Sister chromatid cohesion protein 1

1

0

High-throughput

0.458

High

493622

HSP72
Heat shock protein SSA2

1

2

High-throughput

0.445

High

510833

SSB1
Ribosome-associated molecular chaperone SSB1

1

3

High-throughput

0.445

High

715449

SSB2
Ribosome-associated molecular chaperone SSB2

1

3

High-throughput

0.445

High

715441

CIN4
GTP-binding protein CIN4

1

1

Small-scale

0.439

High

470976

RS22A
Small ribosomal subunit protein uS8A

1

1

High-throughput

0.437

High

471762

RL27A
Large ribosomal subunit protein eL27A

1

1

Small-scale

0.437

High

706188

RS3A1
Small ribosomal subunit protein eS1A

1

1

High-throughput

0.437

High

715427

RL32
Large ribosomal subunit protein eL32

1

1

Small-scale

0.437

High

715443

ERP2
Protein ERP2

2

0

High-throughput

0.324

High

715473

BCK1
Serine/threonine-protein kinase BCK1/SLK1/SSP31

2

0

High-throughput

0.322

High

715440

TCPD
T-complex protein 1 subunit delta

2

0

High-throughput

0.307

High

715500

HRK1
Serine/threonine-protein kinase HRK1

1

0

High-throughput

0.279

Low

634013

BUD3
Bud site selection protein 3

1

0

High-throughput

0.269

Low

686214

GLPK
Glycerol kinase

1

0

High-throughput

0.269

Low

698499

GYP6
GTPase-activating protein GYP6

1

0

High-throughput

0.269

Low

715429

ATG42
Vacuolar serine-type carboxypeptidase ATG42

1

0

High-throughput

0.269

Low

715448

SCC4
MAU2 chromatid cohesion factor homolog

1

0

High-throughput

0.269

Low

715455

ETFB
Probable electron transfer flavoprotein subunit beta

1

0

High-throughput

0.269

Low

715464

ART5
Arrestin-related trafficking adapter 5

1

0

High-throughput

0.269

Low

715506

DAP1
Damage response protein 1

1

0

High-throughput

0.269

Low

691188

MKK1
MAP kinase kinase MKK1/SSP32

1

0

High-throughput

0.261

Low

715461

SCS3
Acyl-coenzyme A diphosphatase SCS3

1

0

Small-scale

0.251

Low

524253

CAF20
Cap-associated protein CAF20

1

0

High-throughput

0.249

Low

715431

NU170
Nucleoporin NUP170

1

0

High-throughput

0.249

Low

715435

RS20
Small ribosomal subunit protein uS10

1

0

High-throughput

0.249

Low

715442

LAA1
AP-1 accessory protein LAA1

1

0

High-throughput

0.249

Low

715493

VAM6
Vacuolar morphogenesis protein 6

1

0

High-throughput

0.249

Low


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Last updated: 15 Jul 2024