HitPredict

Interactor 1: LSM1 (O15116)
U6 snRNA-associated Sm-like protein LSm1 (Cancer-associated Sm-like) (Small nuclear ribonuclear CaSm)
Gene: LSM1

Interactor 2: RU2B (P08579)
U2 small nuclear ribonucleoprotein B'' (U2 snRNP B'')
Gene: SNRPB2

Species: Homo sapiens

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.60	0.479

Property	Details
Experiments	29395067
Identification Methods	proximity labelling technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0005634 - nucleus
Homologous interactions	17

Homologous interactions

Color coding for hit scores

	1 133 Hs			1 225
+	Hs
		167660 LSM1_HUMAN (1-133): 3.57e-53: 165: 100.00		SNRPA_HUMAN (2-225): 2.91e-42: 146: 48.56
+	Hs
		441262 RSMN_HUMAN (6-86): 1.43e-24: 95.8: 23.86		RU2B_HUMAN (1-225): 5.14e-51: 166: 100.00
+	Hs
		441256 RUXG_HUMAN (4-79): 1.75e-25: 93.5: 30.26		RU2B_HUMAN (1-225): 5.14e-51: 166: 100.00
+	Hs
		441225 RSMB_HUMAN (6-86): 1.43e-23: 93.1: 23.86		RU2B_HUMAN (1-225): 5.14e-51: 166: 100.00
+	Hs
		68394 RUXGL_HUMAN (4-79): 1.11e-22: 86.2: 28.95		RU2B_HUMAN (1-225): 5.14e-51: 166: 100.00
+	Hs
		446831 LSM7_HUMAN (8-89): 4.34e-27: 98.5: 29.89		SNRPA_HUMAN (2-225): 2.91e-42: 146: 48.56
+	Hs
		446577 RSMN_HUMAN (6-86): 1.43e-24: 95.8: 23.86		SNRPA_HUMAN (2-225): 2.91e-42: 146: 48.56
+	Sc
		766939 RSMB_YEAST (7-118): 6.9e-23: 90.4: 22.14		NAM8_YEAST (1-224): 5.12e-42: 150: 16.09
+	Dm
		795441 RSMB_DROME (6-74): 5.11e-24: 93.1: 26.32		SNRPA_DROME (1-225): 1.52e-43: 147: 64.44
+	Hs
		446567 RUXG_HUMAN (4-79): 1.75e-25: 93.5: 30.26		SNRPA_HUMAN (2-225): 2.91e-42: 146: 48.56
+	Dm
		795461 RUXG_DROME (4-79): 4.99e-25: 92.3: 30.26		SNRPA_DROME (1-225): 1.52e-43: 147: 64.44
+	Hs
		446497 RSMB_HUMAN (6-86): 1.43e-23: 93.1: 23.86		SNRPA_HUMAN (2-225): 2.91e-42: 146: 48.56
+	Sc
		770321 RUXG_YEAST (4-78): 1.97e-21: 83.1: 31.17		NAM8_YEAST (1-224): 5.12e-42: 150: 16.09
+	Hs
		68396 RUXGL_HUMAN (4-79): 1.11e-22: 86.2: 28.95		SNRPA_HUMAN (2-225): 2.91e-42: 146: 48.56
+	Sc
		766913 RSMB_YEAST (7-118): 6.9e-23: 90.4: 22.14		MSL1_YEAST (7-91): 8.04e-27: 100: 30.59
+	Mm
		646096 RSMB_MOUSE (6-86): 1.3e-23: 93.1: 23.86		TIA1_MOUSE (2-160): 4.64e-17: 80.5: 14.29
+	Hs
		235690 RSMB_HUMAN (6-86): 1.43e-23: 93.1: 23.86		HNRPQ_HUMAN (4-224): 8.43e-14: 71.6: 20.00