HitPredict

Interactor 1: SEP3 (O22456)
Developmental protein SEPALLATA 3 (Agamous-like MADS-box protein AGL9)
Gene: SEP3

Interactor 2: SEP3 (O22456)
Developmental protein SEPALLATA 3 (Agamous-like MADS-box protein AGL9)
Gene: SEP3

Species: Arabidopsis thaliana

Source: biogrid

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.70 1.00 0.839

The method score is based on:

Property Details
Experiments 25228343, 19276203, 22238427
Identification Methods x-ray crystallography, biochemical, pull down, affinity chromatography technology
Interaction Type association, direct interaction, physical association

The annotation score is based on:

Property Details
Interacting Pfam domains K-box~K-box, SRF-TF~SRF-TF
Common GO terms GO:0000978 - RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001708 - cell fate specification
GO:0003677 - DNA binding
GO:0003700 - DNA-binding transcription factor activity
and 9 others

more...
Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

1 251
At

1 251
+ At
+ Gh
+ At
+ Px
+ Gh
+ At
+ At
+ Gh
+ At
+ Px
+ At
+ Gh
+ Px
+ Gh
+ Gh
+ Px
+ Gh
+ Gh
+ Gh
+ Gh

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024