HitPredict

Interactor 1: LDCI (P0A9H3)
Inducible lysine decarboxylase (LDCI) (EC 4.1.1.18)
Gene: cadA

Interactor 2: LDCI (P0A9H3)
Inducible lysine decarboxylase (LDCI) (EC 4.1.1.18)
Gene: cadA

Species: Escherichia coli K-12

Source: mint

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.77	1.00	0.882

The method score is based on:

Property	Details
Experiments	16301313, 21148420, 21278708
Identification Methods	molecular sieving, cosedimentation in solution, x-ray crystallography, electron microscopy, cross-linking study
Interaction Type	physical association, direct interaction

The annotation score is based on:

Property	Details
Interacting Pfam domains	OKR_DC_1~OKR_DC_1, OKR_DC_1~OKR_DC_1_C, OKR_DC_1~OKR_DC_1_N, OKR_DC_1_N~OKR_DC_1_N
Common GO terms	GO:0005829 - cytosol GO:0006527 - arginine catabolic process GO:0006554 - lysine catabolic process GO:0008792 - arginine decarboxylase activity GO:0008923 - lysine decarboxylase activity and 2 others more... GO:0030170 - pyridoxal phosphate binding GO:0097216 - guanosine tetraphosphate binding
Homologous interactions	3

Homologous interactions

Color coding for hit scores

	1	715
Ec

1	715

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024