Interactor 1: PAT1 (P25644)
Deadenylation-dependent mRNA-decapping factor PAT1 (DNA topoisomerase 2-associated protein PAT1) (Decapping activator and translational repressor PAT1) (Topoisomerase II-associated protein PAT1) (mRNA turnover protein 1)
Gene: PAT1
Interactor 2: LSM6 (Q06406)
U6 snRNA-associated Sm-like protein LSm6
Gene: LSM6
Species: Saccharomyces cerevisiae S288C
Source: mint
Category: Small-scale
Confidence: High
| Method score | Annotation score | Interaction score |
|---|---|---|
| 0.94 | 1.00 | 0.970 |
The method score is based on:
| Property | Details |
|---|---|
| Experiments | 10761922, 10900456, 10747033, 23847025, 24247251, 37968396, 16554755, 16429126, 14759368 |
| Identification Methods | coimmunoprecipitation, two hybrid, affinity chromatography technology, pull down, tandem affinity purification |
| Interaction Type | physical association, direct interaction, association |
The annotation score is based on:
| Property | Details |
|---|---|
| Interacting Pfam domains | LSM~PAT1 |
| Common GO terms | GO:0000290 - deadenylation-dependent decapping of nuclear-transcribed mRNA GO:0000932 - P-body GO:0003723 - RNA binding GO:0005634 - nucleus GO:1990726 - Lsm1-7-Pat1 complex |
| Homologous interactions | 1 |
Homologous interactions
Color coding for hit scores 
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Service provided by Combinatics, Japan
Last updated: 15 Jul 2024
