HitPredict

Interactor 1: AGL3 (P29383)
Agamous-like MADS-box protein AGL3 (Protein SEPALLATA 4)
Gene: AGL3

Interactor 2: TT16 (Q8RYD9)
Protein TRANSPARENT TESTA 16 (Arabidopsis BSISTER MADS-box protein)
Gene: TT16

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.43	1.00	0.656

Property	Details
Experiments	16080001
Identification Methods	two hybrid
Interaction Type	direct interaction, physical association

Property	Details
Interacting Pfam domains	K-box~K-box, SRF-TF~SRF-TF
Common GO terms	GO:0000978 - RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003700 - DNA-binding transcription factor activity GO:0005634 - nucleus GO:0045944 - positive regulation of transcription by RNA polymerase II and 1 others more... GO:0046983 - protein dimerization activity
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 258 At			1 252
+	Os
		1014693 MADS6_ORYSJ (1-258): 9.54e-80: 242: 42.91		MADS1_ORYSJ (1-241): 4.21e-69: 215: 32.51
+	At
		666723 AGL3_ARATH (1-258): 2.97e-85: 256: 100.00		AGL8_ARATH (1-242): 6.35e-64: 201: 31.43
+	At
		666720 AGL3_ARATH (1-258): 2.97e-85: 256: 100.00		AGL3_ARATH (1-251): 7e-63: 199: 32.41
+	Os
		1150822 MADS6_ORYSJ (1-258): 9.54e-80: 242: 42.91		MADS8_ORYSJ (1-241): 8.03e-68: 211: 32.93
+	At
		666721 AGL3_ARATH (1-258): 2.97e-85: 256: 100.00		AP1_ARATH (1-237): 5.51e-61: 194: 32.08
+	Os
		1150821 MADS6_ORYSJ (1-258): 9.54e-80: 242: 42.91		MAD17_ORYSJ (1-216): 8.68e-66: 206: 32.74
+	At
		571284 Q84WB0_ARATH (1-258): 2.59e-78: 238: 50.39		AG_ARATH (2-219): 1.6e-65: 205: 32.58
+	Os
		1001544 MADS6_ORYSJ (1-258): 9.54e-80: 242: 42.91		MADS7_ORYSJ (1-241): 2.46e-63: 200: 31.33
+	Px
		1308310 Q9ATE6_PETHY (1-258): 1.28e-78: 239: 54.26		Q9ATF2_PETHY (1-236): 1.13e-64: 203: 32.79
+	Px
		976567 Q9ATE6_PETHY (1-258): 1.28e-78: 239: 54.26		AGL9_PETHY (1-216): 1.07e-62: 198: 36.65
+	Px
		1308294 Q9ATE6_PETHY (1-258): 1.28e-78: 239: 54.26		Q9ATE2_PETHY (1-237): 8.1e-62: 196: 30.42
+	Os
		1000277 MADS6_ORYSJ (1-258): 9.54e-80: 242: 42.91		MAD18_ORYSJ (1-241): 2.9e-59: 189: 29.60
+	Px
		996231 Q9ATE6_PETHY (1-258): 1.28e-78: 239: 54.26		Q08711_PETHY (2-222): 2.31e-60: 192: 34.38
+	Os
		1000291 MADS6_ORYSJ (1-258): 9.54e-80: 242: 42.91		MADS5_ORYSJ (1-222): 5.55e-59: 188: 31.42
+	Px
		1308312 Q9ATE6_PETHY (1-258): 1.28e-78: 239: 54.26		Q9SBQ1_PETHY (1-237): 1.11e-59: 190: 30.45
+	Px
		1308311 Q9ATE6_PETHY (1-258): 1.28e-78: 239: 54.26		Q9SBQ0_PETHY (1-237): 4.38e-59: 189: 30.20
+	At
		248651 AGL3_ARATH (1-258): 2.97e-85: 256: 100.00		SOC1_ARATH (1-166): 5.52e-29: 110: 41.42
+	Os
		1150820 MADS6_ORYSJ (1-258): 9.54e-80: 242: 42.91		MAD57_ORYSJ (1-171): 2.35e-30: 114: 41.86
+	Os
		472755 MADS6_ORYSJ (1-258): 9.54e-80: 242: 42.91		MAD56_ORYSJ (1-166): 4.26e-30: 114: 41.62
+	Px
		1308309 Q9ATE6_PETHY (1-258): 1.28e-78: 239: 54.26		Q9ATE9_PETHY (1-190): 4.49e-29: 110: 40.31