HitPredict

Interactor 1: RENT1 (P30771)
ATP-dependent helicase NAM7 (EC 3.6.4.12) (EC 3.6.4.13) (Nonsense-mediated mRNA decay protein 1) (Nuclear accommodation of mitochondria 7 protein) (Up-frameshift suppressor 1)
Gene: NAM7

Interactor 2: LSM3 (P57743)
U6 snRNA-associated Sm-like protein LSm3 (SmX4 protein)
Gene: LSM3

Species: Saccharomyces cerevisiae S288C

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.56	0.60	0.584

Property	Details
Experiments	30275269, 19740761
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003723 - RNA binding GO:0005737 - cytoplasm
Homologous interactions	8

Homologous interactions

Color coding for hit scores

	1 971 Sc			1 89
+	Sc
		675753 RENT1_YEAST (1-971): 0: 1317: 100.00		LSM1_YEAST (8-84): 1.39e-21: 84.5: 29.87
+	Sc
		675764 RENT1_YEAST (1-971): 0: 1317: 100.00		LSM7_YEAST (2-83): 1.07e-20: 80.6: 30.23
+	Sc
		675745 RENT1_YEAST (1-971): 0: 1317: 100.00		LSM5_YEAST (4-83): 2.79e-19: 76.4: 24.69
+	Hs
		927992 RENT1_HUMAN (37-902): 0: 1142: 53.69		RSMN_HUMAN (10-86): 1.36e-24: 93.7: 26.51
+	Hs
		539084 RENT1_HUMAN (37-902): 0: 1142: 53.69		RSMB_HUMAN (10-86): 3.53e-24: 92.9: 26.51
+	Hs
		321423 RENT1_HUMAN (37-902): 0: 1142: 53.69		LSM8_HUMAN (6-89): 7.16e-22: 82.9: 23.81
+	Sc
		960011 SEN1_YEAST (222-879): 1.13e-156: 512: 23.04		SMD2_YEAST (4-76): 1.35e-20: 80.2: 30.67
+	Hs
		321377 SMBP2_HUMAN (292-893): 9.51e-155: 484: 25.84		LSM8_HUMAN (6-89): 7.16e-22: 82.9: 23.81