HitPredict

Interactor 1: RU17 (Q00916)
U1 small nuclear ribonucleoprotein 70 kDa homolog (U1 70K) (U1 snRNP 70 kDa homolog) (U1-70K) (U1 small nuclear ribonucleoprotein SNP1) (U1 snRNP protein SNP1)
Gene: SNP1

Interactor 2: RU1C (Q05900)
U1 small nuclear ribonucleoprotein C (U1 snRNP C) (U1-C) (U1C)
Gene: YHC1

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.85	1.00	0.922

The method score is based on:

Property	Details
Experiments	11805826, 16554755, 34349264, 37968396, 16429126
Identification Methods	tandem affinity purification, affinity chromatography technology
Interaction Type	physical association, association

The annotation score is based on:

Property	Details
Interacting Pfam domains	U1snRNP70_N~zf-U1
Common GO terms	GO:0000243 - commitment complex GO:0000395 - mRNA 5'-splice site recognition GO:0000398 - mRNA splicing, via spliceosome GO:0003729 - mRNA binding GO:0005634 - nucleus and 4 others more... GO:0005681 - spliceosomal complex GO:0005685 - U1 snRNP GO:0030619 - U1 snRNA binding GO:0071004 - U2-type prespliceosome
Homologous interactions	1

Homologous interactions

Color coding for hit scores

	1	300
Sc

1	231

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024