Protein: DDX55
ATP-dependent RNA helicase DDX55 (EC 3.6.4.13) (DEAD box protein 55)

Gene: DDX55
Organism: Homo sapiens
Interactions: 151
UniProt ID: Q8NHQ9

Gene Ontology (top 5):
GO:0003723 - RNA binding
GO:0003724 - RNA helicase activity
GO:0005524 - ATP binding
GO:0005654 - nucleoplasm
GO:0005730 - nucleolus

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

322901

STAU1
Double-stranded RNA-binding protein Staufen homolog 1

2

20

High-throughput

0.754

High

269805

PRKRA
Interferon-inducible double-stranded RNA-dependent protein kinase activator A

1

20

High-throughput

0.691

High

1245875

DHX36
ATP-dependent DNA/RNA helicase DHX36

1

20

High-throughput

0.691

High

1245886

DDX56
Probable ATP-dependent RNA helicase DDX56

1

18

High-throughput

0.691

High

1245903

RL36
Large ribosomal subunit protein eL36

1

7

High-throughput

0.691

High

1245890

NOL12
Nucleolar protein 12

3

2

High-throughput

0.667

High

1234214

ZGPAT
Zinc finger CCCH-type with G patch domain-containing protein

1

0

High-throughput

0.656

High

489163

H14
Histone H1.4

2

11

High-throughput

0.628

High

944863

RED1
Double-stranded RNA-specific editase 1

1

19

High-throughput

0.618

High

1018595

CHD3
Chromodomain-helicase-DNA-binding protein 3

1

17

High-throughput

0.618

High

1059745

CHD4
Chromodomain-helicase-DNA-binding protein 4

1

17

High-throughput

0.618

High

1245872

DDX23
Probable ATP-dependent RNA helicase DDX23

1

17

High-throughput

0.618

High

1245893

FZR1
Fizzy-related protein homolog

1

20

High-throughput

0.618

High

133576

NOP56
Nucleolar protein 56

2

14

High-throughput

0.611

High

395262

A4
Amyloid-beta precursor protein

2

4

High-throughput

0.602

High

916708

RS6
Small ribosomal subunit protein eS6

2

12

High-throughput

0.584

High

918536

H2B1C
Histone H2B type 1-C/E/F/G/I

2

8

High-throughput

0.584

High

1245883

PICK1
PRKCA-binding protein

2

0

High-throughput

0.580

High

875547

FGF8
Fibroblast growth factor 8

2

12

High-throughput

0.574

High

889589

KR108
Keratin-associated protein 10-8

1

1

High-throughput

0.573

High

370050

ESR1
Estrogen receptor

2

20

High-throughput

0.571

High

1170907

TRI67
Tripartite motif-containing protein 67

1

17

High-throughput

0.553

High

1245891

HECD1
E3 ubiquitin-protein ligase HECTD1

1

20

High-throughput

0.553

High

230062

NPA1P
Nucleolar pre-ribosomal-associated protein 1

1

3

High-throughput

0.536

High

303368

HEXI1
Protein HEXIM1

1

5

High-throughput

0.536

High

418478

NPM
Nucleophosmin

1

9

High-throughput

0.536

High

616416

RS3
Small ribosomal subunit protein uS3

1

9

High-throughput

0.536

High

642469

RL13
Large ribosomal subunit protein eL13

1

11

High-throughput

0.536

High

759743

RS19
Small ribosomal subunit protein eS19

1

12

High-throughput

0.536

High

773458

RL13A
Large ribosomal subunit protein uL13

1

16

High-throughput

0.536

High

806600

RL28
Large ribosomal subunit protein eL28

1

2

High-throughput

0.536

High

807447

RS10
Small ribosomal subunit protein eS10

1

9

High-throughput

0.536

High

853661

IMA5
Importin subunit alpha-5

1

3

High-throughput

0.536

High

899271

RL15
Large ribosomal subunit protein eL15

1

5

High-throughput

0.536

High

907407

RS8
Small ribosomal subunit protein eS8

1

9

High-throughput

0.536

High

908034

RS16
Small ribosomal subunit protein uS9

1

8

High-throughput

0.536

High

916274

RL23A
Large ribosomal subunit protein uL23

1

10

High-throughput

0.536

High

944697

MAP1A
Microtubule-associated protein 1A

1

6

High-throughput

0.536

High

947975

RT11
Small ribosomal subunit protein uS11m

1

11

High-throughput

0.536

High

951658

RL19
Large ribosomal subunit protein eL19

1

7

High-throughput

0.536

High

966601

OTUD4
OTU domain-containing protein 4

1

4

High-throughput

0.536

High

1029007

SRSF6
Serine/arginine-rich splicing factor 6

1

20

High-throughput

0.536

High

1040621

KRR1
KRR1 small subunit processome component homolog

1

9

High-throughput

0.536

High

1045635

NOG2
Nucleolar GTP-binding protein 2

1

19

High-throughput

0.536

High

1069436

TEBP
Prostaglandin E synthase 3

1

3

High-throughput

0.536

High

1073806

RBMS2
RNA-binding motif, single-stranded-interacting protein 2

1

10

High-throughput

0.536

High

1139505

TUT7
Terminal uridylyltransferase 7

1

3

High-throughput

0.536

High

1168913

LN28B
Protein lin-28 homolog B

1

20

High-throughput

0.536

High

1192590

PXK
PX domain-containing protein kinase-like protein

1

8

High-throughput

0.536

High

1202003

CAND1
Cullin-associated NEDD8-dissociated protein 1

1

13

High-throughput

0.536

High

1245855

CTCFL
Transcriptional repressor CTCFL

1

4

High-throughput

0.536

High

1245859

FGF13
Fibroblast growth factor 13

1

12

High-throughput

0.536

High

1245860

RMXL1
RNA binding motif protein, X-linked-like-1

1

19

High-throughput

0.536

High

1245863

NEIL1
Endonuclease 8-like 1

1

3

High-throughput

0.536

High

1245867

MTMR9
Myotubularin-related protein 9

1

2

High-throughput

0.536

High

1245868

AKAP9
A-kinase anchor protein 9

1

12

High-throughput

0.536

High

1245870

LLPH
Protein LLP homolog

1

1

High-throughput

0.536

High

1245871

UTP23
rRNA-processing protein UTP23 homolog

1

5

High-throughput

0.536

High

1245877

LN28A
Protein lin-28 homolog A

1

20

High-throughput

0.536

High

1245884

ABC3C
DNA dC->dU-editing enzyme APOBEC-3C

1

3

High-throughput

0.536

High

1245885

MTMRA
Myotubularin-related protein 10

1

2

High-throughput

0.536

High

1245892

ABT1
Activator of basal transcription 1

1

5

High-throughput

0.536

High

1245894

PACN2
Protein kinase C and casein kinase substrate in neurons protein 2

1

2

High-throughput

0.536

High

1245896

ZC3H4
Zinc finger CCCH domain-containing protein 4

1

2

High-throughput

0.536

High

1245897

MTMR6
Myotubularin-related protein 6

1

2

High-throughput

0.536

High

1245899

YBOX2
Y-box-binding protein 2

1

20

High-throughput

0.536

High

1245900

UTP11
Probable U3 small nucleolar RNA-associated protein 11

1

2

High-throughput

0.536

High

234972

SNX3
Sorting nexin-3

1

0

High-throughput

0.513

High

549909

PHKG2
Phosphorylase b kinase gamma catalytic chain, liver/testis isoform

1

0

High-throughput

0.513

High

1138964

FOCAD
Focadhesin

1

0

High-throughput

0.513

High

1216613

CRLF3
Cytokine receptor-like factor 3

1

0

High-throughput

0.513

High

1245861

RT24
Small ribosomal subunit protein uS3m

1

0

High-throughput

0.513

High

1245862

RRP36
Ribosomal RNA processing protein 36 homolog

1

0

High-throughput

0.513

High

1245879

M1IP1
Mid1-interacting protein 1

1

0

High-throughput

0.513

High

1245881

AVEN
Cell death regulator Aven

1

0

High-throughput

0.513

High

1245901

RT23
Small ribosomal subunit protein mS23

1

0

High-throughput

0.513

High

1245905

RT18B
Small ribosomal subunit protein mS40

1

0

High-throughput

0.513

High

180381

MAGB2
Melanoma-associated antigen B2

1

9

High-throughput

0.489

High

470466

H2A1
Histone H2A type 1

1

10

High-throughput

0.489

High

615440

KALM
Anosmin-1

1

4

High-throughput

0.489

High

1054859

FGFP1
Fibroblast growth factor-binding protein 1

1

3

High-throughput

0.489

High

1192995

ZN467
Zinc finger protein 467

1

1

High-throughput

0.489

High

1245857

DC2I1
Cytoplasmic dynein 2 intermediate chain 1

1

13

High-throughput

0.489

High

1245864

WDR89
WD repeat-containing protein 89

1

20

High-throughput

0.489

High

1245866

LENG8
Leukocyte receptor cluster member 8

1

3

High-throughput

0.489

High

122890

MEN1
Menin

1

5

High-throughput

0.479

High

179733

RPA34
DNA-directed RNA polymerase I subunit RPA34

1

5

High-throughput

0.479

High

205715

TGON2
Trans-Golgi network integral membrane protein 2

1

4

High-throughput

0.479

High

255935

OBSL1
Obscurin-like protein 1

1

7

High-throughput

0.479

High

298669

UFL1
E3 UFM1-protein ligase 1

1

5

High-throughput

0.479

High

347382

MYC
Myc proto-oncogene protein

1

17

High-throughput

0.479

High

379634

MYCN
N-myc proto-oncogene protein

1

17

High-throughput

0.479

High

385195

NTRK1
High affinity nerve growth factor receptor

1

10

High-throughput

0.479

High

432078

HS90A
Heat shock protein HSP 90-alpha

1

10

High-throughput

0.479

High

433906

LYN
Tyrosine-protein kinase Lyn

1

8

High-throughput

0.479

High

455673

PARP1
Poly [ADP-ribose] polymerase 1

1

11

High-throughput

0.479

High

553237

RFA2
Replication protein A 32 kDa subunit

1

9

High-throughput

0.479

High

603602

FBRL
rRNA 2'-O-methyltransferase fibrillarin

1

9

High-throughput

0.479

High

649617

RL10
Large ribosomal subunit protein uL16

1

11

High-throughput

0.479

High

651739

RFA1
Replication protein A 70 kDa DNA-binding subunit

1

8

High-throughput

0.479

High

720961

RFA3
Replication protein A 14 kDa subunit

1

8

High-throughput

0.479

High

760184

RL3
Large ribosomal subunit protein uL3

1

8

High-throughput

0.479

High

828309

CENPA
Histone H3-like centromeric protein A

1

19

High-throughput

0.479

High

877809

FOXA1
Hepatocyte nuclear factor 3-alpha

1

3

High-throughput

0.479

High

880972

IF6
Eukaryotic translation initiation factor 6

1

4

High-throughput

0.479

High

920261

RS24
Small ribosomal subunit protein eS24

1

6

High-throughput

0.479

High

922264

RL31
Large ribosomal subunit protein eL31

1

15

High-throughput

0.479

High

935009

H31
Histone H3.1

1

19

High-throughput

0.479

High

952483

H33
Histone H3.3

1

19

High-throughput

0.479

High

959552

VIGLN
Vigilin

1

14

High-throughput

0.479

High

998899

EP300
Histone acetyltransferase p300

1

15

High-throughput

0.479

High

1017964

GRSF1
G-rich sequence factor 1

1

20

High-throughput

0.479

High

1063964

TNIP1
TNFAIP3-interacting protein 1

1

20

High-throughput

0.479

High

1064505

U5S1
116 kDa U5 small nuclear ribonucleoprotein component

1

9

High-throughput

0.479

High

1066426

KIF14
Kinesin-like protein KIF14

1

6

High-throughput

0.479

High

1085840

IF16
Gamma-interferon-inducible protein 16

1

10

High-throughput

0.479

High

1128508

HABP4
Intracellular hyaluronan-binding protein 4

1

3

High-throughput

0.479

High

1136186

RC3H1
Roquin-1

1

9

High-throughput

0.479

High

1146638

A16L1
Autophagy-related protein 16-1

1

18

High-throughput

0.479

High

1193130

SLN11
Schlafen family member 11

1

3

High-throughput

0.479

High

1201551

ZCH18
Zinc finger CCCH domain-containing protein 18

1

14

High-throughput

0.479

High

1236384

SIR6
NAD-dependent protein deacylase sirtuin-6

1

7

High-throughput

0.479

High

1240874

SERB1
SERPINE1 mRNA-binding protein 1

1

3

High-throughput

0.479

High

1244386

NUP43
Nucleoporin Nup43

1

20

High-throughput

0.479

High

1245856

DOT1L
Histone-lysine N-methyltransferase, H3 lysine-79 specific

1

6

High-throughput

0.479

High

1245858

ESR2
Estrogen receptor beta

1

20

High-throughput

0.479

High

1245865

DDRGK
DDRGK domain-containing protein 1

1

8

High-throughput

0.479

High

1245869

RIOK1
Serine/threonine-protein kinase RIO1

1

10

High-throughput

0.479

High

1245873

MK67I
MKI67 FHA domain-interacting nucleolar phosphoprotein

1

16

High-throughput

0.479

High

1245878

RC3H2
Roquin-2

1

14

High-throughput

0.479

High

1245880

BRD7
Bromodomain-containing protein 7

1

19

High-throughput

0.479

High

1245882

ANLN
Anillin

1

6

High-throughput

0.479

High

1245887

TE2IP
Telomeric repeat-binding factor 2-interacting protein 1

1

1

High-throughput

0.479

High

1245888

UBP36
Ubiquitin carboxyl-terminal hydrolase 36

1

11

High-throughput

0.479

High

1245889

ZRAN1
Ubiquitin thioesterase ZRANB1

1

9

High-throughput

0.479

High

1245895

RL26L
Ribosomal protein uL24-like

1

12

High-throughput

0.479

High

1245902

ZN330
Zinc finger protein 330

1

4

High-throughput

0.479

High

777464

MDHC
Malate dehydrogenase, cytoplasmic

1

0

High-throughput

0.458

High

1245874

TOLIP
Toll-interacting protein

1

0

High-throughput

0.458

High

63226

RP1BL
Ras-related protein Rap-1b-like protein

1

5

High-throughput

0.445

High

484025

CALM2
Calmodulin-2

1

2

High-throughput

0.445

High

1245613

ARK74
Aflatoxin B1 aldehyde reductase member 4

1

1

High-throughput

0.445

High

1245876

PKHA4
Pleckstrin homology domain-containing family A member 4

1

14

High-throughput

0.437

High

1245904

MAFB
Transcription factor MafB

1

8

High-throughput

0.437

High

831507

CEBPA
CCAAT/enhancer-binding protein alpha

1

12

High-throughput

0.408

High

484168

CALM3
Calmodulin-3

1

2

High-throughput

0.407

High

948304

RT34
Small ribosomal subunit protein mS34

2

0

High-throughput

0.328

High

1164226

ATRAP
Type-1 angiotensin II receptor-associated protein

1

0

High-throughput

0.299

High

947102

RT25
Small ribosomal subunit protein mS25

1

0

High-throughput

0.279

Low

948469

RT06
Small ribosomal subunit protein bS6m

1

0

High-throughput

0.279

Low

1245898

RT17
Small ribosomal subunit protein uS17m

1

0

High-throughput

0.279

Low


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Last updated: 15 Jul 2024