Protein: LCP5
U3 small nucleolar ribonucleoprotein protein LCP5

Gene: LCP5
Organism: Saccharomyces cerevisiae S288C
Interactions: 113
UniProt ID: P40079

Gene Ontology (top 5):
GO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 - endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005730 - nucleolus
GO:0005732 - sno(s)RNA-containing ribonucleoprotein complex

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

768123

BFR2
Protein BFR2

5

4

Small-scale

0.723

High

635583

PWP2
Periodic tryptophan protein 2

4

1

Small-scale

0.688

High

768122

NOC4
Nucleolar complex protein 4

5

0

Small-scale

0.680

High

634624

KRR1
KRR1 small subunit processome component

4

1

High-throughput

0.678

High

768079

UTP18
U3 small nucleolar RNA-associated protein 18

3

0

High-throughput

0.641

High

768084

UTP10
U3 small nucleolar RNA-associated protein 10

3

0

High-throughput

0.630

High

768105

UTP5
U3 small nucleolar RNA-associated protein 5

2

1

High-throughput

0.614

High

768114

SGD1
Suppressor of glycerol defect protein 1

2

1

Small-scale

0.614

High

748620

ENP1
Essential nuclear protein 1

3

0

High-throughput

0.613

High

768106

DHR1
Probable ATP-dependent RNA helicase DHR1

3

0

Small-scale

0.613

High

768118

ESF1
Pre-rRNA-processing protein ESF1

2

1

High-throughput

0.611

High

768081

UTP25
U3 small nucleolar RNA-associated protein 25

2

0

High-throughput

0.588

High

768103

UTP6
U3 small nucleolar RNA-associated protein 6

2

0

High-throughput

0.588

High

768082

FAF1
Protein FAF1

2

0

Small-scale

0.585

High

768096

ESF2
Pre-rRNA-processing protein ESF2

2

1

Small-scale

0.584

High

768097

NAT10
RNA cytidine acetyltransferase

2

1

High-throughput

0.584

High

768113

UTP21
U3 small nucleolar RNA-associated protein 21

2

2

Small-scale

0.584

High

768124

UTP4
U3 small nucleolar RNA-associated protein 4

2

1

Small-scale

0.584

High

768136

NOP58
Nucleolar protein 58

2

1

High-throughput

0.584

High

768125

RCL1
RNA 3'-terminal phosphate cyclase-like protein

2

0

Small-scale

0.576

High

768109

UTP14
U3 small nucleolar RNA-associated protein 14

2

0

High-throughput

0.559

High

550047

CSK21
Casein kinase II subunit alpha

1

0

High-throughput

0.518

High

730699

DHR2
Probable ATP-dependent RNA helicase DHR2

1

0

High-throughput

0.518

High

753033

RRP3
ATP-dependent rRNA helicase RRP3

1

0

High-throughput

0.518

High

768077

LCP5
U3 small nucleolar ribonucleoprotein protein LCP5

1

0

High-throughput

0.518

High

768130

FAL1
ATP-dependent RNA helicase FAL1

1

0

High-throughput

0.518

High

733835

RPF2
Ribosome biogenesis protein RPF2

1

0

High-throughput

0.513

High

141362

RS9A
Small ribosomal subunit protein uS4A

1

2

High-throughput

0.479

High

413535

RS14A
Small ribosomal subunit protein uS11A

1

1

High-throughput

0.479

High

480132

RS6A
Small ribosomal subunit protein eS6A

1

1

High-throughput

0.479

High

480699

RS8A
Small ribosomal subunit protein eS8A

1

1

High-throughput

0.479

High

593646

DBP4
ATP-dependent RNA helicase HCA4

1

2

High-throughput

0.479

High

631910

RS2
Small ribosomal subunit protein uS5

1

1

High-throughput

0.479

High

700068

IMP3
U3 small nucleolar ribonucleoprotein protein IMP3

1

2

High-throughput

0.479

High

700445

RSSA1
Small ribosomal subunit protein uS2A

1

2

High-throughput

0.479

High

767365

UTP7
U3 small nucleolar RNA-associated protein 7

1

2

High-throughput

0.479

High

768089

NOL10
Ribosome biogenesis protein ENP2

1

1

High-throughput

0.479

High

768104

UTP17
NET1-associated nuclear protein 1

1

3

High-throughput

0.479

High

768112

UTP13
U3 small nucleolar RNA-associated protein 13

1

2

High-throughput

0.479

High

768121

RRP9
Ribosomal RNA-processing protein 9

1

2

High-throughput

0.479

High

768133

UTP12
U3 small nucleolar RNA-associated protein 12

1

2

High-throughput

0.479

High

768134

NOP56
Nucleolar protein 56

1

1

High-throughput

0.479

High

407947

RS13
Small ribosomal subunit protein uS15

1

0

High-throughput

0.458

High

482288

RS18A
Small ribosomal subunit protein uS13A

1

0

High-throughput

0.458

High

630204

RRP43
Exosome complex component RRP43

1

0

High-throughput

0.458

High

630494

RRP7
Ribosomal RNA-processing protein 7

1

0

High-throughput

0.458

High

645474

RS7A
Small ribosomal subunit protein eS7A

1

0

High-throughput

0.458

High

707095

DCA13
Protein SOF1

1

0

High-throughput

0.458

High

711038

UTP11
U3 small nucleolar RNA-associated protein 11

1

0

High-throughput

0.458

High

715931

UTP20
U3 small nucleolar RNA-associated protein 20

1

0

High-throughput

0.458

High

733566

RL1D1
Ribosome biogenesis protein UTP30

1

0

High-throughput

0.458

High

756741

UTP9
U3 small nucleolar RNA-associated protein 9

1

0

High-throughput

0.458

High

758439

RRP8
25S rRNA

1

0

High-throughput

0.458

High

768080

RRT14
Regulator of rDNA transcription protein 14

1

0

High-throughput

0.458

High

768083

DIM1
Dimethyladenosine transferase

1

0

High-throughput

0.458

High

768085

ROK1
ATP-dependent RNA helicase ROK1

1

0

High-throughput

0.458

High

768086

MTR4
ATP-dependent RNA helicase DOB1

1

0

High-throughput

0.458

High

768088

MPP10
U3 small nucleolar RNA-associated protein MPP10

1

0

High-throughput

0.458

High

768093

UTP22
U3 small nucleolar RNA-associated protein 22

1

0

High-throughput

0.458

High

768095

UTP8
U3 small nucleolar RNA-associated protein 8

1

0

High-throughput

0.458

High

768098

NOP15
Ribosome biogenesis protein 15

1

0

High-throughput

0.458

High

768099

IMP4
U3 small nucleolar ribonucleoprotein protein IMP4

1

0

High-throughput

0.458

High

768107

UTP15
U3 small nucleolar RNA-associated protein 15

1

0

High-throughput

0.458

High

768110

RRP5
rRNA biogenesis protein RRP5

1

0

High-throughput

0.458

High

768111

FCF1
rRNA-processing protein FCF1

1

0

High-throughput

0.458

High

768117

NEP1
Ribosomal RNA small subunit methyltransferase NEP1

1

0

High-throughput

0.458

High

768126

UTP16
U3 small nucleolar RNA-associated protein 16

1

0

High-throughput

0.458

High

768128

BMS1
Ribosome biogenesis protein BMS1

1

0

High-throughput

0.458

High

768129

FCF2
rRNA-processing protein FCF2

1

0

High-throughput

0.458

High

768131

SAS10
Something about silencing protein 10

1

0

High-throughput

0.458

High

768135

RRP36
rRNA biogenesis protein RRP36

1

0

High-throughput

0.458

High

768137

NOP14
Nucleolar complex protein 14

1

0

High-throughput

0.458

High

768120

SP382
Pre-mRNA-splicing factor SPP382

1

0

High-throughput

0.438

High

425982

RS19A
Small ribosomal subunit protein eS19A

1

2

High-throughput

0.437

High

472221

RL31A
Large ribosomal subunit protein eL31A

1

1

High-throughput

0.437

High

662355

TF2B
Transcription initiation factor IIB

1

1

High-throughput

0.437

High

663874

TF3B
Transcription factor IIIB 70 kDa subunit

1

1

High-throughput

0.437

High

768127

RS10A
Small ribosomal subunit protein eS10A

1

1

High-throughput

0.437

High

511490

SSB1
Ribosome-associated molecular chaperone SSB1

1

1

High-throughput

0.407

High

768078

SSB2
Ribosome-associated molecular chaperone SSB2

1

1

High-throughput

0.407

High

471085

RS22A
Small ribosomal subunit protein uS8A

2

0

High-throughput

0.305

High

768087

SNX4
Sorting nexin-4

1

0

Small-scale

0.282

High

768119

ATG17
Autophagy-related protein 17

1

0

High-throughput

0.282

High

676091

XPO1
Exportin-1

1

0

High-throughput

0.279

Low

764062

RV167
Reduced viability upon starvation protein 167

1

0

Small-scale

0.265

Low

412766

KAPA
cAMP-dependent protein kinase type 1

1

0

High-throughput

0.261

Low

539253

YAK1
Dual specificity protein kinase YAK1

1

0

High-throughput

0.261

Low

614671

KC11
Casein kinase I homolog 1

1

0

High-throughput

0.261

Low

768091

ATG1
Serine/threonine-protein kinase ATG1

1

0

High-throughput

0.261

Low

768100

DAD4
DASH complex subunit DAD4

1

0

High-throughput

0.251

Low

768101

HSK3
DASH complex subunit HSK3

1

0

High-throughput

0.251

Low

768108

SPC24
Kinetochore protein SPC24

1

0

High-throughput

0.251

Low

768115

NKP2
Inner kinetochore subunit NKP2

1

0

High-throughput

0.251

Low

358091

RS17A
Small ribosomal subunit protein eS17A

1

0

High-throughput

0.249

Low

383177

RL25
Large ribosomal subunit protein uL23

1

0

High-throughput

0.249

Low

405653

RL26A
Large ribosomal subunit protein uL24A

1

0

High-throughput

0.249

Low

408378

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

0

High-throughput

0.249

Low

606025

RAD53
Serine/threonine-protein kinase RAD53

1

0

High-throughput

0.249

Low

606660

RPC2
DNA-directed RNA polymerase III subunit RPC2

1

0

High-throughput

0.249

Low

692798

SPT16
FACT complex subunit SPT16

1

0

High-throughput

0.249

Low

698819

GSP1
GTP-binding nuclear protein GSP1/CNR1

1

0

High-throughput

0.249

Low

742824

GBLP
Small ribosomal subunit protein RACK1

1

0

High-throughput

0.249

Low

762242

LAA1
AP-1 accessory protein LAA1

1

0

High-throughput

0.249

Low

768090

RS12
Small ribosomal subunit protein eS12

1

0

High-throughput

0.249

Low

768092

EIF2A
Eukaryotic translation initiation factor 2A

1

0

High-throughput

0.249

Low

768102

RS15
Small ribosomal subunit protein uS19

1

0

High-throughput

0.249

Low

768116

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

0

High-throughput

0.249

Low

768132

SCC1
Sister chromatid cohesion protein 1

1

0

High-throughput

0.249

Low

768094

DAM1
DASH complex subunit DAM1

1

0

Small-scale

0.238

Low

491371

HSP71
Heat shock protein SSA1

1

0

High-throughput

0.232

Low

628112

SIS1
Protein SIS1

1

0

High-throughput

0.232

Low

760739

TCPG
T-complex protein 1 subunit gamma

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024