Protein: RL28
Large ribosomal subunit protein bL28 (50S ribosomal protein L28)

Gene: RL28, rpmB
Organism: Escherichia coli K-12
Interactions: 165
UniProt ID: P0A7M2

Gene Ontology (top 5):
GO:0000027 - ribosomal large subunit assembly
GO:0002181 - cytoplasmic translation
GO:0003735 - structural constituent of ribosome
GO:0005737 - cytoplasm
GO:0005829 - cytosol

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

460940

TIG
Trigger factor

3

0

Small-scale

0.607

High

460933

RL32
Large ribosomal subunit protein bL32

2

0

High-throughput

0.601

High

460954

DEAD
ATP-dependent RNA helicase DeaD

2

1

High-throughput

0.588

High

460957

RLUC
Ribosomal large subunit pseudouridine synthase C

2

1

High-throughput

0.588

High

461026

RLUB
Ribosomal large subunit pseudouridine synthase B

2

1

High-throughput

0.588

High

460937

RPOA
DNA-directed RNA polymerase subunit alpha

2

0

High-throughput

0.576

High

460938

SSRP
SsrA-binding protein

2

0

High-throughput

0.576

High

460945

UVRC
UvrABC system protein C

2

0

High-throughput

0.576

High

460977

RL23
Large ribosomal subunit protein uL23

2

0

High-throughput

0.576

High

461000

MUKB
Chromosome partition protein MukB

2

0

High-throughput

0.576

High

460959

YBCJ
Putative RNA-binding protein YbcJ

2

0

High-throughput

0.569

High

340851

RPOD
RNA polymerase sigma factor RpoD

2

0

High-throughput

0.563

High

343875

SYGA
Glycine--tRNA ligase alpha subunit

2

0

High-throughput

0.563

High

458901

HFQ
RNA-binding protein Hfq

2

0

High-throughput

0.563

High

459963

RPPH
RNA pyrophosphohydrolase

2

0

High-throughput

0.563

High

460939

TGT
Queuine tRNA-ribosyltransferase

2

0

High-throughput

0.563

High

460956

ULAR
HTH-type transcriptional regulator UlaR

2

0

High-throughput

0.563

High

460975

YIBL
Uncharacterized protein YibL

2

0

High-throughput

0.563

High

460984

NUSG
Transcription termination/antitermination protein NusG

2

0

High-throughput

0.563

High

461007

UBIC
Chorismate pyruvate-lyase

2

0

High-throughput

0.563

High

461020

AIDB
Putative acyl-CoA dehydrogenase AidB

2

0

High-throughput

0.563

High

461024

RLMN
Dual-specificity RNA methyltransferase RlmN

2

0

High-throughput

0.563

High

461042

PTNAB
PTS system mannose-specific EIIAB component

2

0

High-throughput

0.563

High

460987

SSB
Single-stranded DNA-binding protein

2

0

High-throughput

0.559

High

461071

YAJL
Protein/nucleic acid deglycase 3

2

0

Small-scale

0.547

High

461022

NAPA
Periplasmic nitrate reductase

2

1

High-throughput

0.537

High

461006

RHLE
ATP-dependent RNA helicase RhlE

1

2

High-throughput

0.536

High

427786

CHEA
Chemotaxis protein CheA

1

0

High-throughput

0.513

High

457307

ACKA
Acetate kinase

1

0

High-throughput

0.513

High

460934

RS18
Small ribosomal subunit protein bS18

1

0

High-throughput

0.513

High

460955

ADHE
Bifunctional aldehyde-alcohol dehydrogenase AdhE

1

0

High-throughput

0.513

High

460970

YFIA
Ribosome-associated inhibitor A

1

0

High-throughput

0.513

High

460982

MOAB
Molybdenum cofactor biosynthesis protein B

1

0

High-throughput

0.513

High

461005

MSYB
Acidic protein MsyB

1

0

High-throughput

0.513

High

461013

MOAE
Molybdopterin synthase catalytic subunit

1

0

High-throughput

0.513

High

461018

FDHD
Sulfur carrier protein FdhD

1

0

High-throughput

0.513

High

461027

YGGL
Uncharacterized protein YggL

1

0

High-throughput

0.513

High

461032

USPC
Universal stress protein C

1

0

High-throughput

0.513

High

461037

FLAV
Flavodoxin 1

1

0

High-throughput

0.513

High

461038

GPMA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase

1

0

High-throughput

0.513

High

461059

FADI
3-ketoacyl-CoA thiolase FadI

1

0

High-throughput

0.513

High

461062

YFGD
Uncharacterized protein YfgD

1

0

High-throughput

0.513

High

461068

YBCM
Uncharacterized HTH-type transcriptional regulator YbcM

1

0

High-throughput

0.513

High

460966

PDHR
Pyruvate dehydrogenase complex repressor

1

1

High-throughput

0.489

High

460992

MNGR
Mannosyl-D-glycerate transport/metabolism system repressor MngR

1

1

High-throughput

0.489

High

461016

MODF
ABC transporter ATP-binding protein ModF

1

1

High-throughput

0.489

High

461055

INTQ
Putative defective protein IntQ

1

1

High-throughput

0.489

High

461066

RCLR
RCS-specific HTH-type transcriptional activator RclR

1

1

High-throughput

0.489

High

415737

TOP1
DNA topoisomerase 1

1

1

High-throughput

0.484

High

460946

RHLB
ATP-dependent RNA helicase RhlB

1

2

High-throughput

0.484

High

460995

RECQ
ATP-dependent DNA helicase RecQ

1

1

High-throughput

0.484

High

461039

RLMB
23S rRNA

1

1

High-throughput

0.484

High

460950

YJGA
UPF0307 protein YjgA

1

0

High-throughput

0.479

High

460969

YFCZ
UPF0381 protein YfcZ

1

0

High-throughput

0.479

High

461017

PQQL
Probable zinc protease PqqL

1

0

High-throughput

0.479

High

461031

YHHX
Uncharacterized oxidoreductase YhhX

1

0

High-throughput

0.479

High

461043

DMSD
Tat proofreading chaperone DmsD

1

0

High-throughput

0.479

High

461048

RLMI
Ribosomal RNA large subunit methyltransferase I

1

0

High-throughput

0.479

High

461057

DCYD
D-cysteine desulfhydrase

1

0

High-throughput

0.479

High

460989

YFIF
Uncharacterized tRNA/rRNA methyltransferase YfiF

1

1

High-throughput

0.479

High

340906

DPO1
DNA polymerase I

1

0

High-throughput

0.464

High

368557

DNAA
Chromosomal replication initiator protein DnaA

1

0

High-throughput

0.464

High

457330

ACP
Acyl carrier protein

1

0

High-throughput

0.464

High

458286

CLPP
ATP-dependent Clp protease proteolytic subunit

1

0

High-throughput

0.464

High

459574

KDSA
2-dehydro-3-deoxyphosphooctonate aldolase

1

0

High-throughput

0.464

High

459777

LPXA
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase

1

0

High-throughput

0.464

High

460103

IPYR
Inorganic pyrophosphatase

1

0

High-throughput

0.464

High

460210

PTH
Peptidyl-tRNA hydrolase

1

0

High-throughput

0.464

High

460935

RNH
Ribonuclease HI

1

0

High-throughput

0.464

High

460941

TPIS
Triosephosphate isomerase

1

0

High-throughput

0.464

High

460944

UVRB
UvrABC system protein B

1

0

High-throughput

0.464

High

460953

PHOL
PhoH-like protein

1

0

High-throughput

0.464

High

460965

HSLR
Heat shock protein 15

1

0

High-throughput

0.464

High

460978

MAP1
Methionine aminopeptidase

1

0

High-throughput

0.464

High

460985

SPOT
Bifunctional

1

0

High-throughput

0.464

High

460991

RCSB
Transcriptional regulatory protein RcsB

1

0

High-throughput

0.464

High

460993

SELB
Selenocysteine-specific elongation factor

1

0

High-throughput

0.464

High

461041

NFI
Endonuclease V

1

0

High-throughput

0.464

High

342304

CAPP
Phosphoenolpyruvate carboxylase

1

0

High-throughput

0.458

High

342405

ILVI
Acetolactate synthase isozyme 3 large subunit

1

0

High-throughput

0.458

High

343217

THRC
Threonine synthase

1

0

High-throughput

0.458

High

452014

PUTA
Bifunctional protein PutA [Includes: Proline dehydrogenase

1

0

High-throughput

0.458

High

457317

LEUC
3-isopropylmalate dehydratase large subunit

1

0

High-throughput

0.458

High

458674

FABA
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase

1

0

High-throughput

0.458

High

460947

YEEX
UPF0265 protein YeeX

1

0

High-throughput

0.458

High

460949

YFBU
UPF0304 protein YfbU

1

0

High-throughput

0.458

High

460952

BLC
Outer membrane lipoprotein Blc

1

0

High-throughput

0.458

High

460990

ISCR
HTH-type transcriptional regulator IscR

1

0

High-throughput

0.458

High

461004

TEHB
Tellurite methyltransferase

1

0

High-throughput

0.458

High

461019

YJAG
Uncharacterized protein YjaG

1

0

High-throughput

0.458

High

461040

GMHBB
D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase

1

0

High-throughput

0.458

High

461044

CSRA
Carbon storage regulator

1

0

High-throughput

0.458

High

461069

MENI
1,4-dihydroxy-2-naphthoyl-CoA hydrolase

1

0

High-throughput

0.458

High

460980

PAEA
Polyamine export protein

1

1

High-throughput

0.457

High

460973

FIMB
Type 1 fimbriae regulatory protein FimB

1

1

High-throughput

0.442

High

460994

TOP3
DNA topoisomerase 3

1

1

High-throughput

0.442

High

461033

TORZ
Trimethylamine-N-oxide reductase 2

1

1

High-throughput

0.437

High

461058

YEGH
UPF0053 protein YegH

1

1

High-throughput

0.437

High

459626

KPRS
Ribose-phosphate pyrophosphokinase

1

0

High-throughput

0.426

High

460998

RNE
Ribonuclease E

1

0

Small-scale

0.426

High

461012

THIG
Thiazole synthase

1

0

High-throughput

0.426

High

461052

PAAX
Transcriptional repressor PaaX

3

0

High-throughput

0.342

High

459828

MOAC
Cyclic pyranopterin monophosphate synthase

2

0

High-throughput

0.319

High

460999

RECJ
Single-stranded-DNA-specific exonuclease RecJ

2

0

High-throughput

0.313

High

461064

LYSAC
Peptidyl-lysine N-acetyltransferase PatZ

2

0

High-throughput

0.313

High

460943

YACL
UPF0231 protein YacL

2

0

High-throughput

0.307

High

460964

MBHM
Hydrogenase-2 large chain

2

0

High-throughput

0.307

High

461008

HOLB
DNA polymerase III subunit delta'

2

0

High-throughput

0.307

High

461010

HOLC
DNA polymerase III subunit chi

2

0

High-throughput

0.307

High

461015

3PASE
Inorganic triphosphatase

2

0

High-throughput

0.307

High

461030

YRAN
UPF0102 protein YraN

2

0

High-throughput

0.307

High

461034

END8
Endonuclease 8

2

0

High-throughput

0.307

High

461046

YBJX
Uncharacterized protein YbjX

2

0

High-throughput

0.307

High

461063

A2MG
Alpha-2-macroglobulin

2

0

High-throughput

0.307

High

367437

ARAF
L-arabinose-binding periplasmic protein

1

0

High-throughput

0.279

Low

457469

ATPE
ATP synthase epsilon chain

1

0

High-throughput

0.279

Low

460958

WZB
Low molecular weight protein-tyrosine-phosphatase Wzb

1

0

High-throughput

0.279

Low

460963

FLIL
Flagellar protein FliL

1

0

High-throughput

0.279

Low

460967

RUTR
HTH-type transcriptional regulator RutR

1

0

High-throughput

0.279

Low

460972

ILVM
Acetolactate synthase isozyme 2 small subunit

1

0

High-throughput

0.279

Low

460974

YHJR
Protein YhjR

1

0

High-throughput

0.279

Low

460979

AROM
Protein AroM

1

0

High-throughput

0.279

Low

460981

MAZE
Antitoxin MazE

1

0

High-throughput

0.279

Low

460983

NAGC
N-acetylglucosamine repressor

1

0

High-throughput

0.279

Low

460988

THIL
Thiamine-monophosphate kinase

1

0

High-throughput

0.279

Low

460997

TOLA
Tol-Pal system protein TolA

1

0

High-throughput

0.279

Low

461002

MANB
Phosphomannomutase

1

0

High-throughput

0.279

Low

461028

YJJU
Uncharacterized protein YjjU

1

0

High-throughput

0.279

Low

461035

MNGB
Mannosylglycerate hydrolase

1

0

High-throughput

0.279

Low

461036

YIFN
Putative uncharacterized protein YifN

1

0

High-throughput

0.279

Low

461045

YKFJ
Putative uncharacterized protein YkfJ

1

0

High-throughput

0.279

Low

461047

MACA
Macrolide export protein MacA

1

0

High-throughput

0.279

Low

461050

YMGC
Uncharacterized protein YmgC

1

0

High-throughput

0.279

Low

461054

YDFW
Protein YdfW

1

0

High-throughput

0.279

Low

461060

YPEA
Acetyltransferase YpeA

1

0

High-throughput

0.279

Low

461067

FLXA
Protein FlxA

1

0

High-throughput

0.279

Low

461070

YGCO
Ferredoxin-like protein YgcO

1

0

High-throughput

0.279

Low

460936

RNPA
Ribonuclease P protein component

1

0

High-throughput

0.261

Low

460948

YCJF
UPF0283 membrane protein YcjF

1

0

High-throughput

0.261

Low

460968

LAPA
Lipopolysaccharide assembly protein A

1

0

High-throughput

0.261

Low

460971

NLPD
Murein hydrolase activator NlpD

1

0

High-throughput

0.261

Low

460976

YGGE
Uncharacterized protein YggE

1

0

High-throughput

0.261

Low

461001

ARPA
Ankyrin repeat protein A

1

0

High-throughput

0.261

Low

461003

HYPD
Hydrogenase maturation factor HypD

1

0

High-throughput

0.261

Low

461061

YFFL
Uncharacterized protein YffL

1

0

High-throughput

0.261

Low

460069

PLSB
Glycerol-3-phosphate acyltransferase

1

0

High-throughput

0.253

Low

461009

HOLD
DNA polymerase III subunit psi

1

0

High-throughput

0.253

Low

461021

LLDD
L-lactate dehydrogenase

1

0

High-throughput

0.253

Low

460942

YFCN
UPF0115 protein YfcN

1

0

High-throughput

0.249

Low

460951

YBGC
Acyl-CoA thioester hydrolase YbgC

1

0

High-throughput

0.249

Low

460960

YBIS
Probable L,D-transpeptidase YbiS

1

0

High-throughput

0.249

Low

460961

ATPG
ATP synthase gamma chain

1

0

High-throughput

0.249

Low

460962

EXBB
Biopolymer transport protein ExbB

1

0

High-throughput

0.249

Low

460986

SMP
Probable inner membrane protein Smp

1

0

High-throughput

0.249

Low

460996

PHNK
Putative phosphonates utilization ATP-binding protein PhnK

1

0

High-throughput

0.249

Low

461011

HYPF
Carbamoyltransferase HypF

1

0

High-throughput

0.249

Low

461014

YAFC
Uncharacterized HTH-type transcriptional regulator YafC

1

0

High-throughput

0.249

Low

461023

YADG
Uncharacterized ABC transporter ATP-binding protein YadG

1

0

High-throughput

0.249

Low

461025

WBBK
Putative glycosyltransferase WbbK

1

0

High-throughput

0.249

Low

461029

KDSD
Arabinose 5-phosphate isomerase KdsD

1

0

High-throughput

0.249

Low

461049

CLSC
Cardiolipin synthase C

1

0

High-throughput

0.249

Low

461051

PAAK
Phenylacetate-coenzyme A ligase

1

0

High-throughput

0.249

Low

461053

YNCE
Uncharacterized protein YncE

1

0

High-throughput

0.249

Low

461056

YEAO
Uncharacterized protein YeaO

1

0

High-throughput

0.249

Low

461065

GTRB
Prophage bactoprenol glucosyl transferase homolog

1

0

High-throughput

0.249

Low


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Last updated: 15 Jul 2024