HitPredict

Interactor 1: CSP3 (Q94C69)
Cold shock domain-containing protein 3 (AtCSP3)
Gene: CSP3

Interactor 2: CP29B (Q9ZUU4)
RNA-binding protein CP29B, chloroplastic (Ribonucleoprotein At2g37220)
Gene: CP29B

Species: Arabidopsis thaliana

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.38	1.00	0.621

Property	Details
Experiments	23334891
Identification Methods	two hybrid
Interaction Type	direct interaction

Property	Details
Interacting Pfam domains	CSD~RRM_1
Common GO terms	GO:0003729 - mRNA binding GO:0009409 - response to cold
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 301 At			1 289
+	At
		1115084 CSP3_ARATH (1-301): 9.78e-75: 232: 100.00		CP29A_ARATH (13-289): 4.09e-66: 211: 66.27
+	At
		975623 CSP3_ARATH (1-301): 9.78e-75: 232: 100.00		RBG7_ARATH (86-165): 3.4e-09: 57: 40.00
+	Hs
		1055882 LN28A_HUMAN (2-159): 2.99e-30: 114: 26.01		ELAV3_HUMAN (58-286): 3.96e-50: 171: 23.38
+	Mm
		923889 YBOX1_MOUSE (3-90): 2.21e-25: 104: 31.52		ELAV1_MOUSE (72-287): 5.7e-47: 161: 24.31
+	Hs
		474028 LN28B_HUMAN (2-181): 1.44e-34: 127: 28.72		PAB4L_HUMAN (20-169): 9.66e-28: 111: 19.36
+	Hs
		474037 LN28A_HUMAN (2-159): 2.99e-30: 114: 26.01		PAB4L_HUMAN (20-169): 9.66e-28: 111: 19.36
+	Hs
		1020278 LN28B_HUMAN (2-181): 1.44e-34: 127: 28.72		ELAV2_HUMAN (171-282): 1.86e-22: 97.3: 23.21
+	Hs
		474045 YBOX2_HUMAN (2-95): 2.84e-26: 108: 32.65		PAB4L_HUMAN (20-169): 9.66e-28: 111: 19.36
+	Hs
		474013 YBOX1_HUMAN (3-90): 2.21e-25: 104: 31.52		PAB4L_HUMAN (20-169): 9.66e-28: 111: 19.36
+	Hs
		1020331 LN28A_HUMAN (2-159): 2.99e-30: 114: 26.01		ELAV2_HUMAN (171-282): 1.86e-22: 97.3: 23.21
+	Hs
		516697 LN28A_HUMAN (2-159): 2.99e-30: 114: 26.01		PABP1_HUMAN (194-288): 3.95e-21: 95: 22.11
+	Mm
		665764 LN28A_MOUSE (5-160): 4.24e-29: 112: 25.73		PABP1_MOUSE (194-288): 4.03e-21: 95: 22.11
+	Hs
		516350 YBOX3_HUMAN (2-90): 2.3e-27: 111: 31.18		PABP1_HUMAN (194-288): 3.95e-21: 95: 22.11
+	Hs
		1020355 YBOX2_HUMAN (2-95): 2.84e-26: 108: 32.65		ELAV2_HUMAN (171-282): 1.86e-22: 97.3: 23.21
+	Hs
		931122 YBOX1_HUMAN (3-90): 2.21e-25: 104: 31.52		ELAV2_HUMAN (171-282): 1.86e-22: 97.3: 23.21
+	Hs
		516455 YBOX1_HUMAN (3-90): 2.21e-25: 104: 31.52		PABP1_HUMAN (194-288): 3.95e-21: 95: 22.11
+	Hs
		1031465 LN28A_HUMAN (2-159): 2.99e-30: 114: 26.01		PABP4_HUMAN (1-85): 3.68e-09: 59.1: 8.24
+	Hs
		563174 YBOX3_HUMAN (2-90): 2.3e-27: 111: 31.18		PABP5_HUMAN (95-277): 3.65e-10: 62: 26.78
+	Mm
		1225251 LN28A_MOUSE (5-160): 4.24e-29: 112: 25.73		Q99LF8_MOUSE (1-85): 3.45e-09: 59.1: 8.24
+	Hs
		1288651 YBOX2_HUMAN (2-95): 2.84e-26: 108: 32.65		PABP5_HUMAN (95-277): 3.65e-10: 62: 26.78