HitPredict

Interactor 1: LSM8 (O95777)
U6 snRNA-associated Sm-like protein LSm8
Gene: LSM8

Interactor 2: LSM2 (Q9Y333)
U6 snRNA-associated Sm-like protein LSm2 (Protein G7b) (Small nuclear ribonuclear protein D homolog) (snRNP core Sm-like protein Sm-x5)
Gene: LSM2

Species: Homo sapiens

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.78 1.00 0.886

The method score is based on:

Property Details
Experiments 14667819, 29395067, 15231747, 22365833
Identification Methods two hybrid, proximity labelling technology
Interaction Type direct interaction, physical association

The annotation score is based on:

Property Details
Interacting Pfam domains LSM~LSM
Common GO terms GO:0000398 - mRNA splicing, via spliceosome
GO:0003723 - RNA binding
GO:0005634 - nucleus
GO:0005654 - nucleoplasm
GO:0005688 - U6 snRNP
and 5 others

more...
Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

1 96
Hs

1 95
+ Dm
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+ Dm
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+ Hs
+ Dm
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+ Sc
+ Hs
+ At
+ Dm
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+ Sc

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024