Interactor 1: RPOC (P0A8T7)
DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
Gene: RPOC
Interactor 2: RPOS (P13445)
RNA polymerase sigma factor RpoS (Sigma S) (Sigma-38)
Gene: RPOS
Species: Escherichia coli K-12
Source: intact
Category: High-throughput
Confidence: High
| Method score | Annotation score | Interaction score |
|---|---|---|
| 0.39 | 1.00 | 0.625 |
The method score is based on:
| Property | Details |
|---|---|
| Experiments | 15690043 |
| Identification Methods | tandem affinity purification, pull down |
| Interaction Type | association |
The annotation score is based on:
| Property | Details |
|---|---|
| Interacting Pfam domains | RNA_pol_Rpb1_1~Sigma70_r1_2, RNA_pol_Rpb1_1~Sigma70_r2, RNA_pol_Rpb1_1~Sigma70_r3, RNA_pol_Rpb1_1~Sigma70_r4, RNA_pol_Rpb1_2~Sigma70_r3, RNA_pol_Rpb1_5~Sigma70_r4 |
| Common GO terms | GO:0000345 - cytosolic DNA-directed RNA polymerase complex GO:0003677 - DNA binding GO:0005737 - cytoplasm GO:0006352 - DNA-templated transcription initiation GO:2000142 - regulation of DNA-templated transcription initiation |
| Homologous interactions | 7 |
Homologous interactions
Color coding for hit scores 
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| + | Ec |   |
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| + | Nv | |
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| + | Bs | |
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| + | Hp | |
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| + | Hp | |
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Service provided by Combinatics, Japan
Last updated: 15 Jul 2024
