HitPredict

Interactor 1: YBOX3 (P16989)
Y-box-binding protein 3 (Cold shock domain-containing protein A) (DNA-binding protein A) (Single-strand DNA-binding protein NF-GMB)
Gene: YBX3

Interactor 2: TADBP (Q13148)
TAR DNA-binding protein 43 (TDP-43)
Gene: TARDBP

Species: Homo sapiens

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	1.00	0.618

Property	Details
Experiments	20020773
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	CSD~RRM_1
Common GO terms	GO:0003723 - RNA binding GO:0003730 - mRNA 3'-UTR binding GO:0005634 - nucleus GO:0010468 - regulation of gene expression GO:0070935 - 3'-UTR-mediated mRNA stabilization
Homologous interactions	19

Homologous interactions

Color coding for hit scores

	1 372 Hs			1 414
+	Hs
		994508 YBOX1_HUMAN (58-372): 1.89e-52: 178: 45.89		TADBP_HUMAN (1-414): 1.68e-85: 268: 100.00
+	Hs
		506136 LN28B_HUMAN (63-314): 9.75e-58: 190: 22.39		PAB4L_HUMAN (2-287): 1.1e-57: 194: 18.33
+	Hs
		172223 LN28A_HUMAN (82-256): 3.88e-42: 148: 25.82		HNRDL_HUMAN (62-376): 5.65e-71: 231: 23.60
+	Hs
		909702 LN28A_HUMAN (82-256): 3.88e-42: 148: 25.82		ROA3_HUMAN (98-269): 2.35e-69: 225: 28.57
+	Hs
		506121 YBOX1_HUMAN (58-372): 1.89e-52: 178: 45.89		PAB4L_HUMAN (2-287): 1.1e-57: 194: 18.33
+	Hs
		506153 YBOX2_HUMAN (58-366): 4.56e-50: 173: 42.54		PAB4L_HUMAN (2-287): 1.1e-57: 194: 18.33
+	Hs
		214340 LN28A_HUMAN (82-256): 3.88e-42: 148: 25.82		MSI1H_HUMAN (96-409): 3.35e-61: 203: 23.93
+	Hs
		506145 LN28A_HUMAN (82-256): 3.88e-42: 148: 25.82		PAB4L_HUMAN (2-287): 1.1e-57: 194: 18.33
+	Hs
		994515 YBOX1_HUMAN (58-372): 1.89e-52: 178: 45.89		PABP4_HUMAN (98-275): 1.57e-37: 146: 18.92
+	Hs
		550109 YBOX3_HUMAN (1-372): 8.14e-79: 248: 100.00		PABP1_HUMAN (181-270): 2.86e-10: 64: 20.62
+	Hs
		994793 YBOX1_HUMAN (58-372): 1.89e-52: 178: 45.89		PABP3_HUMAN (2-382): 7.79e-31: 126: 16.41
+	Hs
		1102100 LN28A_HUMAN (82-256): 3.88e-42: 148: 25.82		PABP4_HUMAN (98-275): 1.57e-37: 146: 18.92
+	Mm
		1317387 LN28A_MOUSE (64-256): 6.45e-42: 147: 27.09		Q99LF8_MOUSE (2-410): 5.72e-33: 132: 12.21
+	Hs
		994531 YBOX1_HUMAN (58-372): 1.89e-52: 178: 45.89		HNRPD_HUMAN (81-238): 5.61e-21: 95.1: 35.93
+	Hs
		1120344 LN28A_HUMAN (82-256): 3.88e-42: 148: 25.82		HNRPD_HUMAN (81-238): 5.61e-21: 95.1: 35.93
+	Hs
		550221 YBOX1_HUMAN (58-372): 1.89e-52: 178: 45.89		PABP1_HUMAN (181-270): 2.86e-10: 64: 20.62
+	Hs
		1387471 LN28A_HUMAN (82-256): 3.88e-42: 148: 25.82		MSI2H_HUMAN (41-207): 4.63e-20: 92.2: 23.81
+	Hs
		550472 LN28A_HUMAN (82-256): 3.88e-42: 148: 25.82		PABP1_HUMAN (181-270): 2.86e-10: 64: 20.62
+	Mm
		711000 LN28A_MOUSE (64-256): 6.45e-42: 147: 27.09		PABP1_MOUSE (181-270): 3.15e-10: 64: 20.62