Interactor 1: LSM5 (P40089)
U6 snRNA-associated Sm-like protein LSm5
Gene: LSM5

Interactor 2: LSM7 (P53905)
U6 snRNA-associated Sm-like protein LSm7
Gene: LSM7

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.87 1.00 0.934

The method score is based on:

Property Details
Experiments 10428970, 10900456, 11283351, 10655498, 18719252, 37968396
Identification Methods two hybrid, two hybrid pooling approach, affinity chromatography technology
Interaction Type physical association, direct interaction

The annotation score is based on:

Property Details
Interacting Pfam domains LSM~LSM
Common GO terms GO:0000290 - deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000398 - mRNA splicing, via spliceosome
GO:0000932 - P-body
GO:0000956 - nuclear-transcribed mRNA catabolic process
GO:0003723 - RNA binding
and 10 others

more...

Homologous interactions 14

Homologous interactions

Color coding for hit scores

1 93
Sc

1 115
+ Sc
+ Dm
+ Hs
+ Sc
+ Hs
+ Hs
+ Sp
+ Mm
+ Sc
+ Sc
+ Ce
+ Hs
+ Dm
+ Hs

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024