Protein: TIF1B
Transcription intermediary factor 1-beta (TIF1-beta) (E3 SUMO-protein ligase TRIM28) (EC 2.3.2.27) (KRAB-A-interacting protein) (KRIP-1) (RING-type E3 ubiquitin transferase TIF1-beta) (Tripartite motif-containing protein 28)

Gene: TIF1B, Trim28
Organism: Mus musculus
Interactions: 77
UniProt ID: Q62318

Gene Ontology (top 5):
GO:0000122 - negative regulation of transcription by RNA polymerase II
GO:0000785 - chromatin
GO:0000791 - euchromatin
GO:0000792 - heterochromatin
GO:0001701 - in utero embryonic development

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

949936

CBX1
Chromobox protein homolog 1

5

20

Small-scale

0.936

High

1143019

CBX5
Chromobox protein homolog 5

5

20

Small-scale

0.925

High

1143843

Q9DCC5
Cbx3 protein

4

20

Small-scale

0.913

High

1143825

NANOG
Homeobox protein NANOG

3

19

Small-scale

0.662

High

1143817

TIF1B
Transcription intermediary factor 1-beta

1

19

Small-scale

0.647

High

799603

CBP
Histone lysine acetyltransferase CREBBP

1

19

Small-scale

0.646

High

1111935

SMCA4
Transcription activator BRG1

1

18

Small-scale

0.646

High

1141195

HNRPD
Heterogeneous nuclear ribonucleoprotein D0

1

10

Small-scale

0.646

High

1143819

TIF1A
Transcription intermediary factor 1-alpha

1

19

Small-scale

0.646

High

1143838

ROAA
Heterogeneous nuclear ribonucleoprotein A/B

1

12

Small-scale

0.646

High

1143839

TRI33
E3 ubiquitin-protein ligase TRIM33

1

19

Small-scale

0.646

High

1143851

HNRPC
Heterogeneous nuclear ribonucleoproteins C1/C2

1

7

Small-scale

0.646

High

193131

DAXX
Death domain-associated protein 6

2

6

Small-scale

0.594

High

572250

PCNA
Proliferating cell nuclear antigen

2

4

Small-scale

0.584

High

1143848

AIRE
Autoimmune regulator

1

20

Small-scale

0.575

High

956202

MCM6
DNA replication licensing factor MCM6

1

19

High-throughput

0.561

High

1143846

SRTD1
SERTA domain-containing protein 1

1

2

Small-scale

0.552

High

590361

PO5F1
POU domain, class 5, transcription factor 1

1

12

Small-scale

0.536

High

949305

TNIK
Traf2 and NCK-interacting protein kinase

1

13

High-throughput

0.536

High

1115942

SHAN3
SH3 and multiple ankyrin repeat domains protein 3

1

6

High-throughput

0.536

High

1142594

SMRD1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1

1

3

Small-scale

0.536

High

1142834

FXR1
RNA-binding protein FXR1

1

16

High-throughput

0.536

High

1143822

MYCB2
E3 ubiquitin-protein ligase MYCBP2

1

1

High-throughput

0.536

High

1143824

MYOME
Myomegalin

1

17

High-throughput

0.536

High

1143844

TSC1
Hamartin

1

13

High-throughput

0.536

High

420770

MYB
Transcriptional activator Myb

1

6

Small-scale

0.527

High

868999

ATX1
Ataxin-1

1

3

High-throughput

0.515

High

1143847

CAF1A
Chromatin assembly factor 1 subunit A

1

14

Small-scale

0.501

High

222700

PER2
Period circadian protein homolog 2

1

17

Small-scale

0.500

High

521443

NR4A1
Nuclear receptor subfamily 4 group A member 1

1

20

Small-scale

0.500

High

794351

MSH2
DNA mismatch repair protein Msh2

1

6

Small-scale

0.500

High

956818

SMRC1
SWI/SNF complex subunit SMARCC1

1

13

Small-scale

0.500

High

1113691

Q3V232
Zinc finger protein 709

1

20

Small-scale

0.500

High

1141283

ITF2
Transcription factor 4

1

6

Small-scale

0.500

High

1143840

VTA1
Vacuolar protein sorting-associated protein VTA1 homolog

1

1

Small-scale

0.500

High

1143849

SNF5
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1

1

2

Small-scale

0.500

High

1143098

Z354A
Zinc finger protein 354A

1

20

High-throughput

0.481

High

1143826

ZNF2
Zinc finger protein 2

1

20

High-throughput

0.481

High

1143842

Q9D4A7
Zinc finger protein 819

1

20

Small-scale

0.481

High

193353

SOCS1
Suppressor of cytokine signaling 1

1

17

Small-scale

0.479

High

222847

ACK1
Activated CDC42 kinase 1

1

19

Small-scale

0.479

High

606352

ZFP42
Zinc finger protein 42

1

20

Small-scale

0.479

High

818721

SOX2
Transcription factor SOX-2

1

20

High-throughput

0.479

High

821713

LMNA
Prelamin-A/C [Cleaved into: Lamin-A/C]

1

20

Small-scale

0.479

High

886491

LMBL2
Lethal(3)malignant brain tumor-like protein 2

1

3

Small-scale

0.479

High

904268

HNRPK
Heterogeneous nuclear ribonucleoprotein K

1

19

High-throughput

0.479

High

910261

1433E
14-3-3 protein epsilon

1

3

High-throughput

0.479

High

1132063

Q5SXC4
Vascular endothelial zinc finger 1

1

20

Small-scale

0.479

High

1142098

NR0B1
Nuclear receptor subfamily 0 group B member 1

1

20

Small-scale

0.479

High

1142600

SOX17
Transcription factor SOX-17

1

20

Small-scale

0.479

High

1143818

TFE3
Transcription factor E3

1

7

High-throughput

0.479

High

1143823

FACD2
Fanconi anemia group D2 protein homolog

1

7

High-throughput

0.479

High

1143827

Q8BLK6
Zinc finger protein 68

1

20

Small-scale

0.479

High

1143828

IQCB1
IQ calmodulin-binding motif-containing protein 1

1

1

High-throughput

0.479

High

1143829

Q8BPK8
Agenet-like domain-containing protein

1

16

High-throughput

0.479

High

1143833

KAT5
Histone acetyltransferase KAT5

1

6

Small-scale

0.479

High

1143834

LN28A
Protein lin-28 homolog A

1

11

Small-scale

0.479

High

1143836

NLRP3
NACHT, LRR and PYD domains-containing protein 3

1

6

Small-scale

0.479

High

1143837

EED
Polycomb protein EED

1

20

High-throughput

0.479

High

1143841

SSBP3
Single-stranded DNA-binding protein 3

1

8

Small-scale

0.479

High

1143850

Q9Z117
KRAB-containing zinc-finger protein KRAZ1

1

20

Small-scale

0.479

High

1123105

LITD1
LINE-1 type transposase domain-containing protein 1

1

2

Small-scale

0.457

High

102674

ZN809
Zinc finger protein 809

1

20

Small-scale

0.445

High

729500

FMR1
Fragile X messenger ribonucleoprotein 1

1

16

High-throughput

0.445

High

936517

TBX5
T-box transcription factor TBX5

1

6

Small-scale

0.445

High

1143820

Q6AXH7
Histone-lysine N-methyltransferase EZH2

1

20

High-throughput

0.445

High

1143832

FTM
Protein fantom

1

12

High-throughput

0.445

High

620966

GRIA2
Glutamate receptor 2

1

1

High-throughput

0.437

High

885993

PIM3
Serine/threonine-protein kinase pim-3

1

9

Small-scale

0.437

High

1143821

TEDC2
Tubulin epsilon and delta complex protein 2

1

1

High-throughput

0.437

High

1143830

A16L1
Autophagy-related protein 16-1

1

16

High-throughput

0.437

High

1143831

MT21E
Protein-lysine methyltransferase METTL21E

1

4

High-throughput

0.437

High

139823

HCD2
3-hydroxyacyl-CoA dehydrogenase type-2

1

3

High-throughput

0.407

High

1143845

XPO7
Exportin-7

1

5

High-throughput

0.407

High

371944

CFAD
Complement factor D

1

0

High-throughput

0.249

Low

1143835

FNDC5
Fibronectin type III domain-containing protein 5

1

0

High-throughput

0.249

Low


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Last updated: 15 Jul 2024