Protein: LSM12
Protein LSM12 (Sm-like protein 12)

Gene: LSM12
Organism: Saccharomyces cerevisiae S288C
Interactions: 139
UniProt ID: P38828

Gene Ontology (top 5):
GO:0003723 - RNA binding
GO:0005634 - nucleus
GO:0005737 - cytoplasm
GO:0010494 - cytoplasmic stress granule
GO:0016070 - RNA metabolic process

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

755843

PBP1
PAB1-binding protein 1

8

5

Small-scale

0.753

High

755869

PBP4
Protein PBP4

4

0

Small-scale

0.653

High

366263

HSP82
ATP-dependent molecular chaperone HSP82

4

0

High-throughput

0.649

High

755853

UBP3
Ubiquitin carboxyl-terminal hydrolase 3

3

0

Small-scale

0.643

High

755822

SSB2
Ribosome-associated molecular chaperone SSB2

3

2

High-throughput

0.634

High

755816

DHH1
ATP-dependent RNA helicase DHH1

2

4

High-throughput

0.614

High

755844

BRE5
UBP3-associated protein BRE5

2

2

High-throughput

0.611

High

755859

POLH
DNA polymerase eta

2

0

Small-scale

0.605

High

755851

MCE1
mRNA-capping enzyme subunit alpha

2

0

High-throughput

0.595

High

755871

PUF3
mRNA-binding protein PUF3

2

1

High-throughput

0.588

High

752443

RS20
Small ribosomal subunit protein uS10

2

1

Small-scale

0.584

High

631868

RS2
Small ribosomal subunit protein uS5

2

0

Small-scale

0.559

High

491163

HSP71
Heat shock protein SSA1

2

2

High-throughput

0.552

High

511250

SSB1
Ribosome-associated molecular chaperone SSB1

2

2

High-throughput

0.552

High

693106

CDC5
Cell cycle serine/threonine-protein kinase CDC5/MSD2

1

1

Small-scale

0.536

High

755881

YGK3
Glycogen synthase kinase-3 homolog YGK3

1

1

High-throughput

0.536

High

755813

KOG1
Target of rapamycin complex 1 subunit KOG1

1

0

High-throughput

0.529

High

755828

SGN1
RNA-binding protein SGN1

1

3

High-throughput

0.515

High

755848

NOP15
Ribosome biogenesis protein 15

1

2

High-throughput

0.515

High

425340

PHO4
Phosphate system positive regulatory protein PHO4

1

0

High-throughput

0.513

High

697880

ALK2
Serine/threonine-protein kinase Haspin homolog ALK2

1

0

High-throughput

0.513

High

755823

RIO2
Serine/threonine-protein kinase RIO2

1

0

High-throughput

0.513

High

755841

PRP43
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43

1

0

High-throughput

0.513

High

755883

HSP42
Heat shock protein 42

1

0

High-throughput

0.513

High

419613

RAD52
DNA repair and recombination protein RAD52

1

0

High-throughput

0.493

High

615144

BUR1
Serine/threonine-protein kinase BUR1

1

0

High-throughput

0.493

High

622870

DPB2
DNA polymerase epsilon subunit B

1

0

High-throughput

0.493

High

626030

MED19
Mediator of RNA polymerase II transcription subunit 19

1

0

High-throughput

0.493

High

664814

BMH1
Protein BMH1

1

0

High-throughput

0.493

High

673199

CGS5
S-phase entry cyclin-5

1

0

High-throughput

0.493

High

689720

MDHP
Malate dehydrogenase, peroxisomal

1

0

High-throughput

0.493

High

696320

PP12
Serine/threonine-protein phosphatase PP1-2

1

0

High-throughput

0.493

High

699156

RAD5
DNA repair protein RAD5

1

0

High-throughput

0.493

High

711166

SLD2
DNA replication regulator SLD2

1

0

High-throughput

0.493

High

755737

ORC6
Origin recognition complex subunit 6

1

0

High-throughput

0.493

High

755824

PIG2
GSY2-interacting protein PIG2

1

0

High-throughput

0.493

High

755827

ACA2
ATF/CREB activator 2

1

0

High-throughput

0.493

High

755831

TAF1
Transcription initiation factor TFIID subunit 1

1

0

High-throughput

0.493

High

755834

GYP3
GTPase-activating protein GYP3

1

0

High-throughput

0.493

High

755836

RL38
Large ribosomal subunit protein eL38

1

0

High-throughput

0.493

High

755837

ASE1
Anaphase spindle elongation protein

1

0

High-throughput

0.493

High

755839

VPS4
Vacuolar protein sorting-associated protein 4

1

0

High-throughput

0.493

High

755842

NPY1
NAD-capped RNA hydrolase NPY1

1

0

High-throughput

0.493

High

755847

EAF7
Chromatin modification-related protein EAF7

1

0

High-throughput

0.493

High

755856

SGF11
SAGA-associated factor 11

1

0

High-throughput

0.493

High

755864

EIS1
Eisosome protein 1

1

0

High-throughput

0.493

High

755867

MED10
Mediator of RNA polymerase II transcription subunit 10

1

0

High-throughput

0.493

High

755872

YL032
KH domain-containing protein YLL032C

1

0

High-throughput

0.493

High

755880

REC8
Meiotic recombination protein REC8

1

0

High-throughput

0.493

High

755855

DIG1
Down-regulator of invasive growth 1

1

0

High-throughput

0.486

High

755858

DIG2
Down-regulator of invasive growth 2

1

0

High-throughput

0.486

High

755882

PRR2
Serine/threonine-protein kinase PRR2

1

0

High-throughput

0.480

High

376780

PABP
Polyadenylate-binding protein, cytoplasmic and nuclear

1

3

Small-scale

0.479

High

675732

RENT1
ATP-dependent helicase NAM7

1

2

Small-scale

0.479

High

700398

RSSA1
Small ribosomal subunit protein uS2A

1

1

High-throughput

0.479

High

755818

RSMB
Small nuclear ribonucleoprotein-associated protein B

1

2

High-throughput

0.479

High

755840

VID30
Vacuolar import and degradation protein 30

1

1

High-throughput

0.479

High

755850

NAM8
Protein NAM8

1

3

High-throughput

0.479

High

755875

NCBP2
Nuclear cap-binding protein subunit 2

1

2

High-throughput

0.479

High

755876

RU2A
U2 small nuclear ribonucleoprotein A'

1

1

High-throughput

0.479

High

755878

YRA1
RNA annealing protein YRA1

1

3

Small-scale

0.479

High

141322

RS9A
Small ribosomal subunit protein uS4A

1

0

High-throughput

0.458

High

356467

H4
Histone H4

1

0

Small-scale

0.458

High

383136

RL25
Large ribosomal subunit protein uL23

1

0

High-throughput

0.458

High

404577

RL7A
Large ribosomal subunit protein uL30A

1

0

High-throughput

0.458

High

405613

RL26A
Large ribosomal subunit protein uL24A

1

0

High-throughput

0.458

High

406525

RL22A
Large ribosomal subunit protein eL22A

1

0

High-throughput

0.458

High

407037

RS3
Small ribosomal subunit protein uS3

1

0

Small-scale

0.458

High

407907

RS13
Small ribosomal subunit protein uS15

1

0

High-throughput

0.458

High

425942

RS19A
Small ribosomal subunit protein eS19A

1

0

High-throughput

0.458

High

482255

RS18A
Small ribosomal subunit protein uS13A

1

0

High-throughput

0.458

High

527004

TBP
TATA-box-binding protein

1

0

High-throughput

0.458

High

534984

RL3
Large ribosomal subunit protein uL3

1

0

High-throughput

0.458

High

624080

DBP2
ATP-dependent RNA helicase DBP2

1

0

High-throughput

0.458

High

640940

RL5
Large ribosomal subunit protein uL18

1

0

High-throughput

0.458

High

662174

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.458

High

688232

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

0

High-throughput

0.458

High

696635

RU1A
U1 small nuclear ribonucleoprotein A

1

0

High-throughput

0.458

High

704337

CBF5
H/ACA ribonucleoprotein complex subunit CBF5

1

0

High-throughput

0.458

High

729905

RS27A
Small ribosomal subunit protein eS27A

1

0

High-throughput

0.458

High

732362

MUD2
Splicing factor MUD2

1

0

Small-scale

0.458

High

742785

GBLP
Small ribosomal subunit protein RACK1

1

0

Small-scale

0.458

High

748134

AIM4
Altered inheritance of mitochondria protein 4

1

0

High-throughput

0.458

High

755815

STM1
Suppressor protein STM1

1

0

Small-scale

0.458

High

755819

ARB1
ABC transporter ATP-binding protein ARB1

1

0

Small-scale

0.458

High

755825

ATAD2
ATPase histone chaperone YTA7

1

0

High-throughput

0.458

High

755826

TM108
Protein TMA108

1

0

High-throughput

0.458

High

755833

JHD2
Histone demethylase JHD2

1

0

Small-scale

0.458

High

755835

RS12
Small ribosomal subunit protein eS12

1

0

High-throughput

0.458

High

755838

UBC9
SUMO-conjugating enzyme UBC9

1

0

High-throughput

0.458

High

755845

GIS2
Zinc finger protein GIS2

1

0

High-throughput

0.458

High

755846

IGO1
mRNA stability protein IGO1

1

0

Small-scale

0.458

High

755849

APJ1
J domain-containing protein APJ1

1

0

High-throughput

0.458

High

755854

RS15
Small ribosomal subunit protein uS19

1

0

High-throughput

0.458

High

755860

LRS4
Monopolin complex subunit LRS4

1

0

Small-scale

0.458

High

755861

DHR1
Probable ATP-dependent RNA helicase DHR1

1

0

High-throughput

0.458

High

755862

PDS5
Sister chromatid cohesion protein PDS5

1

0

High-throughput

0.458

High

755866

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

0

High-throughput

0.458

High

755868

URN1
Pre-mRNA-splicing factor URN1

1

0

High-throughput

0.458

High

755870

VAM6
Vacuolar morphogenesis protein 6

1

0

High-throughput

0.458

High

755873

ESA1
Histone acetyltransferase ESA1

1

0

Small-scale

0.458

High

755874

RS10A
Small ribosomal subunit protein eS10A

1

0

High-throughput

0.458

High

755877

TMA46
Translation machinery-associated protein 46

1

0

High-throughput

0.458

High

755879

BBP
Branchpoint-bridging protein

1

0

Small-scale

0.458

High

755884

RUVB2
RuvB-like protein 2

1

0

High-throughput

0.458

High

755887

SUS1
Transcription and mRNA export factor SUS1

1

0

Small-scale

0.458

High

493922

HSP72
Heat shock protein SSA2

1

2

High-throughput

0.445

High

732138

CAB3
Coenzyme A biosynthesis protein 3

1

0

High-throughput

0.438

High

755830

RSSA2
Small ribosomal subunit protein uS2B

1

1

High-throughput

0.437

High

368041

EF1A
Elongation factor 1-alpha

1

0

High-throughput

0.426

High

556033

VATB
V-type proton ATPase subunit B

1

0

High-throughput

0.426

High

755829

MPG1
Mannose-1-phosphate guanyltransferase

1

0

High-throughput

0.426

High

706262

RS3A1
Small ribosomal subunit protein eS1A

2

0

High-throughput

0.305

High

342924

ENO2
Enolase 2

1

0

High-throughput

0.279

Low

698501

GYP6
GTPase-activating protein GYP6

1

0

High-throughput

0.269

Low

747692

YSW1
Spore-specific protein YSW1

1

0

High-throughput

0.269

Low

752282

MSC7
Putative aldehyde dehydrogenase-like protein YHR039C

1

0

High-throughput

0.269

Low

753606

YHA8
Uncharacterized transporter YHL008C

1

0

High-throughput

0.269

Low

755820

RSM18
Small ribosomal subunit protein bS18m

1

0

High-throughput

0.269

Low

755821

SCC4
MAU2 chromatid cohesion factor homolog

1

0

High-throughput

0.269

Low

755832

IRC8
Uncharacterized protein IRC8

1

0

High-throughput

0.269

Low

755852

ARG56
Protein ARG5,6, mitochondrial [Cleaved into: N-acetyl-gamma-glutamyl-phosphate reductase

1

0

High-throughput

0.269

Low

755863

UTP15
U3 small nucleolar RNA-associated protein 15

1

0

High-throughput

0.269

Low

755865

BL1S1
Biogenesis of lysosome-related organelles complex 1 subunit BLS1

1

0

High-throughput

0.269

Low

358057

RS17A
Small ribosomal subunit protein eS17A

1

0

High-throughput

0.249

Low

413495

RS14A
Small ribosomal subunit protein uS11A

1

0

High-throughput

0.249

Low

450433

C1TM
C-1-tetrahydrofolate synthase, mitochondrial

1

0

High-throughput

0.249

Low

471047

RS22A
Small ribosomal subunit protein uS8A

1

0

High-throughput

0.249

Low

472182

RL31A
Large ribosomal subunit protein eL31A

1

0

High-throughput

0.249

Low

480094

RS6A
Small ribosomal subunit protein eS6A

1

0

High-throughput

0.249

Low

480663

RS8A
Small ribosomal subunit protein eS8A

1

0

High-throughput

0.249

Low

645434

RS7A
Small ribosomal subunit protein eS7A

1

0

High-throughput

0.249

Low

745646

NU170
Nucleoporin NUP170

1

0

High-throughput

0.249

Low

747263

GID4
Vacuolar import and degradation protein 24

1

0

High-throughput

0.249

Low

755814

TEM1
Protein TEM1

1

0

High-throughput

0.249

Low

755817

LAA1
AP-1 accessory protein LAA1

1

0

High-throughput

0.249

Low

755857

PEX29
Peroxisomal membrane protein PEX29

1

0

Small-scale

0.249

Low

755885

NOP58
Nucleolar protein 58

1

0

High-throughput

0.249

Low

755886

PDP1
[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial

1

0

High-throughput

0.249

Low


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Last updated: 15 Jul 2024