Protein: CHD1
Chromo domain-containing protein 1 (EC 3.6.4.-) (ATP-dependent helicase CHD1)

Gene: CHD1
Organism: Saccharomyces cerevisiae S288C
Interactions: 153
UniProt ID: P32657

Gene Ontology (top 5):
GO:0000124 - SAGA complex
GO:0000182 - rDNA binding
GO:0000785 - chromatin
GO:0000976 - transcription cis-regulatory region binding
GO:0001178 - regulation of transcriptional start site selection at RNA polymerase II promoter

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

356350

H4
Histone H4

9

12

Small-scale

0.970

High

697421

H3
Histone H3

6

20

Small-scale

0.933

High

697384

ISW1
ISWI chromatin-remodeling complex ATPase ISW1

4

17

Small-scale

0.892

High

355410

H2B1
Histone H2B.1

3

20

Small-scale

0.827

High

697449

ISW2
ISWI chromatin-remodeling complex ATPase ISW2

2

17

High-throughput

0.802

High

697431

RUVB1
RuvB-like protein 1

2

4

High-throughput

0.789

High

549988

CSK21
Casein kinase II subunit alpha

7

9

Small-scale

0.749

High

584687

CSK22
Casein kinase II subunit alpha'

7

12

Small-scale

0.749

High

692724

SPT16
FACT complex subunit SPT16

8

3

Small-scale

0.749

High

697435

POB3
FACT complex subunit POB3

8

7

Small-scale

0.747

High

392360

H2A2
Histone H2A.2

2

20

High-throughput

0.737

High

697461

H2AZ
Histone H2A.Z

2

20

High-throughput

0.737

High

606597

RPC2
DNA-directed RNA polymerase III subunit RPC2

2

0

High-throughput

0.720

High

697364

CHD1
Chromo domain-containing protein 1

1

17

High-throughput

0.665

High

697393

CSK2C
Casein kinase II subunit beta'

5

4

Small-scale

0.657

High

697408

CSK2B
Casein kinase II subunit beta

5

4

Small-scale

0.657

High

697416

RTF1
RNA polymerase-associated protein RTF1

3

0

Small-scale

0.648

High

392087

H2A1
Histone H2A.1

1

20

Small-scale

0.647

High

697401

ATAD2
ATPase histone chaperone YTA7

3

3

High-throughput

0.633

High

599436

VPS1
Vacuolar protein sorting-associated protein 1

2

1

High-throughput

0.621

High

355836

H2B2
Histone H2B.2

1

20

High-throughput

0.618

High

557960

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

1

High-throughput

0.618

High

687674

BTAF1
TATA-binding protein-associated factor MOT1

1

18

Small-scale

0.618

High

696184

STH1
Nuclear protein STH1/NPS1

1

16

High-throughput

0.618

High

697369

NCBP1
Nuclear cap-binding protein complex subunit 1

1

1

High-throughput

0.618

High

697376

CENPA
Histone H3-like centromeric protein CSE4

1

20

High-throughput

0.618

High

697407

RSC8
Chromatin structure-remodeling complex protein RSC8

1

15

High-throughput

0.618

High

697425

ADA2
Transcriptional adapter 2

1

14

Small-scale

0.618

High

697439

ARP9
Actin-like protein ARP9

1

16

High-throughput

0.618

High

697458

ARP7
Actin-related protein 7

1

12

High-throughput

0.618

High

697442

YL455
PWWP domain-containing protein YLR455W

2

8

Small-scale

0.611

High

697453

SCC1
Sister chromatid cohesion protein 1

2

4

Small-scale

0.611

High

510682

SSB1
Ribosome-associated molecular chaperone SSB1

2

11

High-throughput

0.601

High

697436

RCO1
Transcriptional regulatory protein RCO1

1

20

High-throughput

0.575

High

697440

SWR1
Helicase SWR1

1

18

High-throughput

0.575

High

697427

HOS3
Histone deacetylase HOS3

2

20

High-throughput

0.571

High

697429

GCN5
Histone acetyltransferase GCN5

2

20

Small-scale

0.571

High

627846

SIS1
Protein SIS1

1

1

High-throughput

0.536

High

697463

HSH49
Protein HSH49

1

5

High-throughput

0.536

High

534922

RL3
Large ribosomal subunit protein uL3

2

2

High-throughput

0.521

High

697367

CBF5
H/ACA ribonucleoprotein complex subunit CBF5

1

3

High-throughput

0.515

High

697392

HRB1
Serine/arginine

1

8

High-throughput

0.515

High

697426

ABF2
ARS-binding factor 2, mitochondrial

1

20

High-throughput

0.515

High

697385

CND2
Condensin complex subunit 2

1

0

Small-scale

0.513

High

697387

PAF1
RNA polymerase II-associated protein 1

1

3

Small-scale

0.501

High

697388

LEO1
RNA polymerase-associated protein LEO1

1

4

Small-scale

0.501

High

697422

CTR9
RNA polymerase-associated protein CTR9

1

10

Small-scale

0.501

High

697443

CDC73
Cell division control protein 73

1

2

Small-scale

0.501

High

697382

BOB1
Protein BOB1

1

7

High-throughput

0.494

High

697460

CMR1
DNA damage-binding protein CMR1

1

14

High-throughput

0.481

High

406907

RS3
Small ribosomal subunit protein uS3

1

2

High-throughput

0.479

High

420102

TOP2
DNA topoisomerase 2

1

8

High-throughput

0.479

High

635494

RSC6
Chromatin structure-remodeling complex protein RSC6

1

10

High-throughput

0.479

High

640883

RL5
Large ribosomal subunit protein uL18

1

2

High-throughput

0.479

High

650253

SPT5
Transcription elongation factor SPT5

1

7

Small-scale

0.479

High

661702

TF2B
Transcription initiation factor IIB

1

1

High-throughput

0.479

High

688163

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

1

High-throughput

0.479

High

697366

GSP1
GTP-binding nuclear protein GSP1/CNR1

1

6

High-throughput

0.479

High

697370

SAS3
Histone acetyltransferase SAS3

1

6

High-throughput

0.479

High

697371

SPT7
Transcriptional activator SPT7

1

20

Small-scale

0.479

High

697372

RRP1
Ribosomal RNA-processing protein 1

1

6

High-throughput

0.479

High

697373

SPT10
Protein SPT10

1

1

High-throughput

0.479

High

697375

BDF1
Bromodomain-containing factor 1

1

20

High-throughput

0.479

High

697383

TAF5
Transcription initiation factor TFIID subunit 5

1

12

Small-scale

0.479

High

697389

RFC1
Replication factor C subunit 1

1

4

High-throughput

0.479

High

697391

TRA1
Transcription-associated protein 1

1

8

Small-scale

0.479

High

697398

SCC4
MAU2 chromatid cohesion factor homolog

1

1

Small-scale

0.479

High

697404

ULP2
Ubiquitin-like-specific protease 2

1

2

High-throughput

0.479

High

697405

DSN1
Kinetochore-associated protein DSN1

1

1

High-throughput

0.479

High

697413

UBP8
Ubiquitin carboxyl-terminal hydrolase 8

1

9

Small-scale

0.479

High

697415

TAF6
Transcription initiation factor TFIID subunit 6

1

2

Small-scale

0.479

High

697420

APJ1
J domain-containing protein APJ1

1

3

High-throughput

0.479

High

697423

NOP3
Serine/arginine

1

19

Small-scale

0.479

High

697430

TAF12
Transcription initiation factor TFIID subunit 12

1

5

Small-scale

0.479

High

697432

SCC2
Sister chromatid cohesion protein 2

1

1

High-throughput

0.479

High

697434

PDS5
Sister chromatid cohesion protein PDS5

1

1

High-throughput

0.479

High

697438

TAF9
Transcription initiation factor TFIID subunit 9

1

3

Small-scale

0.479

High

697441

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

1

High-throughput

0.479

High

697444

BDF2
Bromodomain-containing factor 2

1

20

High-throughput

0.479

High

697450

TAF10
Transcription initiation factor TFIID subunit 10

1

1

Small-scale

0.479

High

697454

YRA1
RNA annealing protein YRA1

1

9

High-throughput

0.479

High

697455

RIO1
Serine/threonine-protein kinase RIO1

1

3

High-throughput

0.479

High

697456

NTO1
NuA3 HAT complex component NTO1

1

14

High-throughput

0.479

High

697462

RL11B
Large ribosomal subunit protein uL5B

1

4

High-throughput

0.479

High

549359

FBRL
rRNA 2'-O-methyltransferase fibrillarin

1

5

High-throughput

0.470

High

697437

RRP5
rRNA biogenesis protein RRP5

1

8

High-throughput

0.470

High

420600

SPT3
Protein SPT3

1

0

Small-scale

0.458

High

633841

SGF29
SAGA-associated factor 29

1

0

Small-scale

0.458

High

691306

NGG1
Chromatin-remodeling complexes subunit NGG1

1

0

Small-scale

0.458

High

696726

RTG2
Retrograde regulation protein 2

1

0

Small-scale

0.458

High

697365

RSC7
Chromatin structure-remodeling complex subunit RSC7

1

0

High-throughput

0.458

High

697374

SPT21
Protein SPT21

1

0

High-throughput

0.458

High

697386

LDB7
Chromatin structure-remodeling complex protein RSC14

1

0

High-throughput

0.458

High

697396

EXO1
Exodeoxyribonuclease 1

1

0

High-throughput

0.458

High

697402

MAM33
Mitochondrial acidic protein MAM33

1

0

High-throughput

0.458

High

697414

SPT20
Transcription factor SPT20

1

0

Small-scale

0.458

High

697418

RT102
Regulator of Ty1 transposition protein 102

1

0

High-throughput

0.458

High

697428

RSC9
Chromatin structure-remodeling complex subunit RSC9

1

0

High-throughput

0.458

High

697433

IOC4
ISWI one complex protein 4

1

0

High-throughput

0.458

High

697447

SGO1
Shugoshin

1

0

High-throughput

0.458

High

697451

HFI1
Transcriptional coactivator HFI1/ADA1

1

0

Small-scale

0.458

High

697452

IOC2
ISWI one complex protein 2

1

0

High-throughput

0.458

High

697464

HTL1
High temperature lethal protein 1

1

0

High-throughput

0.458

High

366015

HSP82
ATP-dependent molecular chaperone HSP82

1

5

High-throughput

0.445

High

419323

HAP2
Transcriptional activator HAP2

1

1

High-throughput

0.445

High

449977

HSP73
Heat shock protein SSA3

1

10

High-throughput

0.445

High

490702

HSP71
Heat shock protein SSA1

1

10

High-throughput

0.445

High

493508

HSP72
Heat shock protein SSA2

1

10

High-throughput

0.445

High

609061

SIN3
Transcriptional regulatory protein SIN3

1

12

High-throughput

0.445

High

628851

SWI4
Regulatory protein SWI4

1

5

High-throughput

0.445

High

633066

MAS5
Mitochondrial protein import protein MAS5

1

3

High-throughput

0.445

High

689853

ASF1
Histone chaperone ASF1

1

6

High-throughput

0.445

High

694353

HSP7F
Heat shock protein homolog SSE1

1

13

High-throughput

0.445

High

697368

HSP78
Heat shock protein 78, mitochondrial

1

2

High-throughput

0.445

High

697377

LHS1
Heat shock protein 70 homolog LHS1

1

11

High-throughput

0.445

High

697380

SET3
SET domain-containing protein 3

1

12

High-throughput

0.445

High

697390

SSZ1
Ribosome-associated complex subunit SSZ1

1

9

High-throughput

0.445

High

697394

CAJ1
Protein CAJ1

1

1

High-throughput

0.445

High

697397

HSP7E
Heat shock protein SSC3, mitochondrial

1

11

High-throughput

0.445

High

697399

SSB2
Ribosome-associated molecular chaperone SSB2

1

11

High-throughput

0.445

High

697400

RT106
Histone chaperone RTT106

1

1

High-throughput

0.445

High

697412

RL4B
Large ribosomal subunit protein uL4B

1

3

High-throughput

0.445

High

697419

JJJ1
J protein JJJ1

1

2

High-throughput

0.445

High

697424

RSC4
Chromatin structure-remodeling complex subunit RSC4

1

20

High-throughput

0.445

High

697448

ESA1
Histone acetyltransferase ESA1

1

6

High-throughput

0.445

High

697459

RLF2
Chromatin assembly factor 1 subunit p90

1

11

High-throughput

0.445

High

404531

RL7A
Large ribosomal subunit protein uL30A

1

2

High-throughput

0.437

High

404989

RL6B
Large ribosomal subunit protein eL6B

1

3

High-throughput

0.437

High

405153

RL17A
Large ribosomal subunit protein uL22A

1

3

High-throughput

0.437

High

405517

RL26A
Large ribosomal subunit protein uL24A

1

3

High-throughput

0.437

High

406116

RL36A
Large ribosomal subunit protein eL36A

1

2

High-throughput

0.437

High

406498

RL22A
Large ribosomal subunit protein eL22A

1

2

High-throughput

0.437

High

478858

RL20B
Large ribosomal subunit protein eL20B

1

2

High-throughput

0.437

High

481881

RL12B
Large ribosomal subunit protein uL11B

1

2

High-throughput

0.437

High

482847

RL35A
Large ribosomal subunit protein uL29A

1

2

High-throughput

0.437

High

564252

RL8A
Large ribosomal subunit protein eL8A

1

5

High-throughput

0.437

High

697379

RL14A
Large ribosomal subunit protein eL14A

1

4

High-throughput

0.437

High

697395

LAA1
AP-1 accessory protein LAA1

1

1

High-throughput

0.437

High

697403

RL34B
Large ribosomal subunit protein eL34B

1

1

High-throughput

0.437

High

697406

RL10
Large ribosomal subunit protein uL16

1

4

High-throughput

0.437

High

697409

RL17B
Large ribosomal subunit protein uL22B

1

3

High-throughput

0.437

High

697417

RL26B
Large ribosomal subunit protein uL24B

1

3

High-throughput

0.437

High

697446

BRX1
Ribosome biogenesis protein BRX1

1

5

High-throughput

0.437

High

697445

RSC58
Chromatin structure-remodeling complex protein RSC58

1

0

High-throughput

0.426

High

628943

SCJ1
DnaJ-related protein SCJ1

1

1

High-throughput

0.407

High

697381

RPF2
Ribosome biogenesis protein RPF2

1

0

High-throughput

0.269

Low

516858

SIR4
Regulatory protein SIR4

1

0

Small-scale

0.251

Low

524232

CAF20
Cap-associated protein CAF20

1

0

High-throughput

0.249

Low

697411

RL37A
Large ribosomal subunit protein eL37A

1

0

High-throughput

0.249

Low

697378

CAB3
Coenzyme A biosynthesis protein 3

1

0

High-throughput

0.238

Low

697410

PFD3
Prefoldin subunit 3

1

0

High-throughput

0.232

Low

697457

HSP42
Heat shock protein 42

1

0

High-throughput

0.232

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024