HitPredict

Interactor 1: U1135 (Q8VY74)
U11/U12 small nuclear ribonucleoprotein 35 kDa protein (U11/U12 snRNP 35 kDa protein) (U11/U12-35K)
Gene: SNRNP35

Interactor 2: Q9FYB1 (Q9FYB1)
Splicing factor SC35
Gene: sc35

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.38	1.00	0.618

Property	Details
Experiments	15987817
Identification Methods	pull down
Interaction Type	physical association

Property	Details
Interacting Pfam domains	RRM_1~RRM_1
Common GO terms	GO:0003723 - RNA binding GO:0005634 - nucleus GO:0006397 - mRNA processing GO:0008380 - RNA splicing
Homologous interactions	19

Homologous interactions

Color coding for hit scores

	1 333 At			1 303
+	At
		1354357 U1135_ARATH (1-333): 1.16e-48: 167: 100.00		SC35_ARATH (1-303): 7.45e-36: 132: 99.67
+	At
		1246190 CYP59_ARATH (58-325): 2.3e-36: 138: 20.15		SC35_ARATH (1-303): 7.45e-36: 132: 99.67
+	At
		1246191 CYP59_ARATH (58-325): 2.3e-36: 138: 20.15		Q9FYB1_ARATH (1-303): 6.17e-36: 132: 100.00
+	Hs
		1148527 PPIL4_HUMAN (25-319): 1.24e-41: 153: 17.97		SF3B4_HUMAN (3-104): 1.57e-23: 101: 22.33
+	Hs
		550262 PABP1_HUMAN (55-262): 5.2e-35: 136: 15.87		PABP4_HUMAN (7-183): 2.4e-27: 113: 15.08
+	Mm
		710979 TIA1_MOUSE (59-277): 1.38e-40: 147: 14.93		PABP1_MOUSE (17-272): 3.1e-22: 98.7: 14.83
+	Mm
		915284 TIA1_MOUSE (59-277): 1.38e-40: 147: 14.93		ELAV1_MOUSE (1-98): 1.17e-22: 97.6: 25.25
+	Sc
		403283 PABP_YEAST (46-263): 9.42e-35: 135: 15.14		PABP_YEAST (2-204): 1.92e-25: 107: 14.56
+	Mm
		1000307 Q80ZW7_MOUSE (59-277): 1.02e-38: 142: 14.93		ELAV1_MOUSE (1-98): 1.17e-22: 97.6: 25.25
+	Hs
		550250 PABP1_HUMAN (55-262): 5.2e-35: 136: 15.87		ELAV2_HUMAN (9-98): 1.24e-24: 103: 26.67
+	Hs
		550137 PABP1_HUMAN (55-262): 5.2e-35: 136: 15.87		TIA1_HUMAN (11-229): 4.47e-24: 102: 14.80
+	Hs
		1197178 PAP1L_HUMAN (55-259): 4.9e-35: 136: 16.59		PABP3_HUMAN (7-188): 1.7e-22: 99.5: 14.67
+	Hs
		550237 PABP1_HUMAN (55-262): 5.2e-35: 136: 15.87		TIAR_HUMAN (10-229): 4.67e-23: 99.5: 13.39
+	Hs
		550464 PABP1_HUMAN (55-262): 5.2e-35: 136: 15.87		PABP3_HUMAN (7-188): 1.7e-22: 99.5: 14.67
+	Hs
		550097 PABP1_HUMAN (55-262): 5.2e-35: 136: 15.87		PABP1_HUMAN (17-272): 2.33e-22: 99.1: 14.83
+	Hs
		550311 PAP1L_HUMAN (55-259): 4.9e-35: 136: 16.59		PABP1_HUMAN (17-272): 2.33e-22: 99.1: 14.83
+	Mm
		915306 TIA1_MOUSE (59-277): 1.38e-40: 147: 14.93		SRSF2_MOUSE (9-95): 1.2e-15: 76.3: 55.17
+	Hs
		1197174 PAP1L_HUMAN (55-259): 4.9e-35: 136: 16.59		PABP5_HUMAN (20-212): 2.49e-16: 80.3: 11.40
+	Hs
		550407 PABP1_HUMAN (55-262): 5.2e-35: 136: 15.87		PABP5_HUMAN (20-212): 2.49e-16: 80.3: 11.40